Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNU6-1326P-201ENST00000391262 107 ntBASIC1.59□□□□□ -2.15
PDZRN3Q9UPQ7 RNU6-782P-201ENST00000516852 104 ntBASIC1.59□□□□□ -2.15
PDZRN3Q9UPQ7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.59□□□□□ -2.15
PDZRN3Q9UPQ7 MIR6515-201ENST00000619843 57 ntBASIC1.59□□□□□ -2.15
PDZRN3Q9UPQ7 RNU6-939P-201ENST00000384634 107 ntBASIC1.58□□□□□ -2.16
PDZRN3Q9UPQ7 SNORD57-201ENST00000448188 72 ntBASIC1.58□□□□□ -2.16
PDZRN3Q9UPQ7 AL353803.5-201ENST00000599815 141 ntBASIC1.58□□□□□ -2.16
PDZRN3Q9UPQ7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PDZRN3Q9UPQ7 MIR520E-201ENST00000384867 87 ntBASIC1.57□□□□□ -2.16
PDZRN3Q9UPQ7 Y_RNA.698-201ENST00000516798 118 ntBASIC1.57□□□□□ -2.16
PDZRN3Q9UPQ7 RNU1-29P-201ENST00000606574 126 ntBASIC1.57□□□□□ -2.16
PDZRN3Q9UPQ7 RNU6-133P-201ENST00000383989 107 ntBASIC1.56□□□□□ -2.16
PDZRN3Q9UPQ7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.56□□□□□ -2.16
PDZRN3Q9UPQ7 SNORD111B-201ENST00000408587 80 ntBASIC1.56□□□□□ -2.16
PDZRN3Q9UPQ7 MIR151B-201ENST00000584249 96 ntBASIC1.56□□□□□ -2.16
PDZRN3Q9UPQ7 MIR6788-201ENST00000618842 66 ntBASIC1.56□□□□□ -2.16
PDZRN3Q9UPQ7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
PDZRN3Q9UPQ7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
PDZRN3Q9UPQ7 RNU6-530P-201ENST00000391180 107 ntBASIC1.55□□□□□ -2.16
PDZRN3Q9UPQ7 SNORD114-29-201ENST00000364819 70 ntBASIC1.54□□□□□ -2.16
PDZRN3Q9UPQ7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.54□□□□□ -2.16
PDZRN3Q9UPQ7 RNU6-175P-201ENST00000516896 107 ntBASIC1.54□□□□□ -2.16
PDZRN3Q9UPQ7 MIR618-201ENST00000385287 98 ntBASIC1.53□□□□□ -2.16
PDZRN3Q9UPQ7 FABP5P4-201ENST00000437203 171 ntBASIC1.53□□□□□ -2.16
PDZRN3Q9UPQ7 AC108676.2-201ENST00000605225 163 ntBASIC1.53□□□□□ -2.16
PDZRN3Q9UPQ7 MIR18A-201ENST00000362310 71 ntBASIC1.52□□□□□ -2.17
PDZRN3Q9UPQ7 RNU6-485P-201ENST00000363475 107 ntBASIC1.52□□□□□ -2.17
PDZRN3Q9UPQ7 RPS29P1-201ENST00000465274 159 ntBASIC1.52□□□□□ -2.17
PDZRN3Q9UPQ7 SNORD63.2-201ENST00000516303 64 ntBASIC1.52□□□□□ -2.17
PDZRN3Q9UPQ7 RNU7-188P-201ENST00000517063 64 ntBASIC1.52□□□□□ -2.17
PDZRN3Q9UPQ7 U7.5-201ENST00000517224 61 ntBASIC1.52□□□□□ -2.17
PDZRN3Q9UPQ7 MIR4432-201ENST00000581823 84 ntBASIC1.52□□□□□ -2.17
PDZRN3Q9UPQ7 PVT1_3.1-201ENST00000620853 95 ntBASIC1.51□□□□□ -2.17
PDZRN3Q9UPQ7 SNORD115-23-201ENST00000364461 82 ntBASIC1.5□□□□□ -2.17
PDZRN3Q9UPQ7 MIR598-201ENST00000384868 97 ntBASIC1.5□□□□□ -2.17
PDZRN3Q9UPQ7 RNU7-88P-201ENST00000458752 63 ntBASIC1.5□□□□□ -2.17
PDZRN3Q9UPQ7 AC087343.1-201ENST00000477341 475 ntBASIC1.5□□□□□ -2.17
PDZRN3Q9UPQ7 RNU6-1174P-201ENST00000517278 101 ntBASIC1.5□□□□□ -2.17
PDZRN3Q9UPQ7 MIR5706-201ENST00000579841 80 ntBASIC1.5□□□□□ -2.17
PDZRN3Q9UPQ7 MIR4295-201ENST00000585286 85 ntBASIC1.5□□□□□ -2.17
PDZRN3Q9UPQ7 SNORA25-201ENST00000384384 134 ntBASIC1.49□□□□□ -2.17
PDZRN3Q9UPQ7 MIR548J-201ENST00000408833 112 ntBASIC1.49□□□□□ -2.17
PDZRN3Q9UPQ7 MIR3170-201ENST00000582699 77 ntBASIC1.49□□□□□ -2.17
PDZRN3Q9UPQ7 MIR6507-201ENST00000613630 70 ntBASIC1.49□□□□□ -2.17
PDZRN3Q9UPQ7 MIR6767-201ENST00000637302 66 ntBASIC1.49□□□□□ -2.17
PDZRN3Q9UPQ7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
PDZRN3Q9UPQ7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.47□□□□□ -2.17
PDZRN3Q9UPQ7 SNORD63.1-201ENST00000516178 80 ntBASIC1.47□□□□□ -2.17
PDZRN3Q9UPQ7 MIR4317-201ENST00000637586 65 ntBASIC1.47□□□□□ -2.17
PDZRN3Q9UPQ7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
PDZRN3Q9UPQ7 RNU6-1047P-201ENST00000364418 107 ntBASIC1.46□□□□□ -2.18
PDZRN3Q9UPQ7 RNU6-1036P-201ENST00000383959 104 ntBASIC1.46□□□□□ -2.18
PDZRN3Q9UPQ7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PDZRN3Q9UPQ7 RNA5SP327-201ENST00000362494 101 ntBASIC1.45□□□□□ -2.18
PDZRN3Q9UPQ7 SNORD114-27-201ENST00000363766 70 ntBASIC1.45□□□□□ -2.18
PDZRN3Q9UPQ7 MIR19B1-201ENST00000384829 87 ntBASIC1.44□□□□□ -2.18
PDZRN3Q9UPQ7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
PDZRN3Q9UPQ7 SNORD124-201ENST00000459577 104 ntBASIC1.44□□□□□ -2.18
PDZRN3Q9UPQ7 MIR4464-201ENST00000580818 92 ntBASIC1.44□□□□□ -2.18
PDZRN3Q9UPQ7 Y_RNA.321-201ENST00000365149 102 ntBASIC1.43□□□□□ -2.18
PDZRN3Q9UPQ7 MIR6779-201ENST00000617283 64 ntBASIC1.43□□□□□ -2.18
PDZRN3Q9UPQ7 MIR6888-201ENST00000621977 67 ntBASIC1.43□□□□□ -2.18
PDZRN3Q9UPQ7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
PDZRN3Q9UPQ7 RNU6-258P-201ENST00000390884 101 ntBASIC1.42□□□□□ -2.18
PDZRN3Q9UPQ7 MIR1285-1-201ENST00000408593 84 ntBASIC1.42□□□□□ -2.18
PDZRN3Q9UPQ7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
PDZRN3Q9UPQ7 AC069271.1-201ENST00000445577 156 ntBASIC1.41□□□□□ -2.18
PDZRN3Q9UPQ7 AC011195.1-201ENST00000578177 177 ntBASIC1.41□□□□□ -2.18
PDZRN3Q9UPQ7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
PDZRN3Q9UPQ7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
PDZRN3Q9UPQ7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PDZRN3Q9UPQ7 RNU4-45P-201ENST00000365469 141 ntBASIC1.39□□□□□ -2.19
PDZRN3Q9UPQ7 MIR200A-201ENST00000384875 90 ntBASIC1.39□□□□□ -2.19
PDZRN3Q9UPQ7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.39□□□□□ -2.19
PDZRN3Q9UPQ7 RNU6-1232P-201ENST00000516299 86 ntBASIC1.39□□□□□ -2.19
PDZRN3Q9UPQ7 SNORD99-201ENST00000408612 74 ntBASIC1.38□□□□□ -2.19
PDZRN3Q9UPQ7 MIR1468-201ENST00000410600 86 ntBASIC1.38□□□□□ -2.19
PDZRN3Q9UPQ7 RN7SL660P-201ENST00000614852 299 ntBASIC1.38□□□□□ -2.19
PDZRN3Q9UPQ7 MIR4426-201ENST00000640330 63 ntBASIC1.38□□□□□ -2.19
PDZRN3Q9UPQ7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.37□□□□□ -2.19
PDZRN3Q9UPQ7 AC104408.1-201ENST00000605241 170 ntBASIC1.37□□□□□ -2.19
PDZRN3Q9UPQ7 MIR6857-201ENST00000613267 93 ntBASIC1.37□□□□□ -2.19
PDZRN3Q9UPQ7 AL445584.3-201ENST00000617173 78 ntBASIC1.37□□□□□ -2.19
PDZRN3Q9UPQ7 RNU1-124P-201ENST00000363861 145 ntBASIC1.36□□□□□ -2.19
PDZRN3Q9UPQ7 RNA5SP255-201ENST00000516370 107 ntBASIC1.36□□□□□ -2.19
PDZRN3Q9UPQ7 RNA5SP404-201ENST00000517118 132 ntBASIC1.36□□□□□ -2.19
PDZRN3Q9UPQ7 MIR4677-201ENST00000584153 80 ntBASIC1.36□□□□□ -2.19
PDZRN3Q9UPQ7 RNU6-1111P-201ENST00000391118 107 ntBASIC1.35□□□□□ -2.19
PDZRN3Q9UPQ7 AC211469.2-201ENST00000605461 205 ntBASIC1.35□□□□□ -2.19
PDZRN3Q9UPQ7 MIR5000-201ENST00000577717 103 ntBASIC1.34□□□□□ -2.19
PDZRN3Q9UPQ7 SNORD114-21-201ENST00000606412 72 ntBASIC1.34□□□□□ -2.19
PDZRN3Q9UPQ7 U7.6-201ENST00000610841 64 ntBASIC1.34□□□□□ -2.19
PDZRN3Q9UPQ7 MIR373-201ENST00000362273 69 ntBASIC1.33□□□□□ -2.2
PDZRN3Q9UPQ7 RNA5SP517-201ENST00000364724 117 ntBASIC1.32□□□□□ -2.2
PDZRN3Q9UPQ7 SNORA2A-201ENST00000383885 135 ntBASIC1.32□□□□□ -2.2
PDZRN3Q9UPQ7 MIR520D-201ENST00000385002 87 ntBASIC1.32□□□□□ -2.2
PDZRN3Q9UPQ7 MIR501-201ENST00000390204 84 ntBASIC1.32□□□□□ -2.2
PDZRN3Q9UPQ7 RNU6-229P-201ENST00000516614 102 ntBASIC1.32□□□□□ -2.2
PDZRN3Q9UPQ7 RNU6-1238P-201ENST00000517215 102 ntBASIC1.32□□□□□ -2.2
PDZRN3Q9UPQ7 AP000676.1-201ENST00000533307 52 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 275.8 ms