Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC099654.10-201ENST00000640395 161 ntBASIC-0.71□□□□□ -2.52
CCDC88CQ9P219 MIR365A-201ENST00000362260 87 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 SNORA2.1-201ENST00000363089 137 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 SNORA19-201ENST00000384737 128 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 MIR587-201ENST00000384845 96 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 MIR590-201ENST00000385008 97 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 MIR527-201ENST00000385244 85 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 SNORD63.1-201ENST00000516178 80 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 RNU6-659P-201ENST00000516454 104 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 RNU6-706P-201ENST00000517229 104 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 U7.3-201ENST00000616123 62 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 MIR6818-201ENST00000621576 65 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 MIR3914-2-201ENST00000637339 95 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 SNORD19-201ENST00000391191 68 ntBASIC-0.72□□□□□ -2.53
CCDC88CQ9P219 RNU6-255P-201ENST00000516957 105 ntBASIC-0.72□□□□□ -2.53
CCDC88CQ9P219 AC138207.3-201ENST00000585289 166 ntBASIC-0.72□□□□□ -2.53
CCDC88CQ9P219 AC104996.3-201ENST00000590718 94 ntBASIC-0.72□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.73□□□□□ -2.53
CCDC88CQ9P219 RNU6-746P-201ENST00000384112 109 ntBASIC-0.73□□□□□ -2.53
CCDC88CQ9P219 MTATP8P2-201ENST00000435212 202 ntBASIC-0.73□□□□□ -2.53
CCDC88CQ9P219 RNU6-904P-201ENST00000516206 101 ntBASIC-0.73□□□□□ -2.53
CCDC88CQ9P219 RNA5SP470-201ENST00000516463 106 ntBASIC-0.73□□□□□ -2.53
CCDC88CQ9P219 SNORD115-37-201ENST00000363768 82 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 MIR147A-201ENST00000385079 72 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 U4.4-201ENST00000620626 117 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 RNU6-162P-201ENST00000516228 103 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 RNU6-794P-201ENST00000517261 64 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 MIR2052-201ENST00000636055 55 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 SNORD115-33-201ENST00000363723 82 ntBASIC-0.75□□□□□ -2.53
CCDC88CQ9P219 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.75□□□□□ -2.53
CCDC88CQ9P219 RNU6-246P-201ENST00000384702 107 ntBASIC-0.75□□□□□ -2.53
CCDC88CQ9P219 RNU6-554P-201ENST00000410466 106 ntBASIC-0.75□□□□□ -2.53
CCDC88CQ9P219 MIR548AG1-201ENST00000579932 66 ntBASIC-0.75□□□□□ -2.53
CCDC88CQ9P219 AC006160.2-201ENST00000637708 154 ntBASIC-0.75□□□□□ -2.53
CCDC88CQ9P219 MIR630-201ENST00000384957 97 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 MIR889-201ENST00000401280 79 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 AL353691.2-201ENST00000443795 59 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 MIR3115-201ENST00000577915 68 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 RNU6-704P-201ENST00000364162 103 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 SNORD116-21-201ENST00000384507 92 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 uc_338.19-201ENST00000616808 99 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 SNORD77.2-201ENST00000391045 68 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 MIR1285-2-201ENST00000408311 88 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 RNU7-174P-201ENST00000516248 59 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 AP001318.4-201ENST00000616637 121 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 U4.2-201ENST00000618561 85 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 SNORD116-22-201ENST00000384430 92 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 RNU6-576P-201ENST00000390854 102 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 RNU6-982P-201ENST00000516216 102 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.78□□□□□ -2.53
CCDC88CQ9P219 AC090425.1-201ENST00000610007 140 ntBASIC-0.78□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 RNY1P5-201ENST00000383890 115 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 AC018880.2-201ENST00000414265 201 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 AL021921.1-201ENST00000442774 93 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 AL450471.1-201ENST00000447509 127 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 RNU6-752P-201ENST00000516376 102 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 RNU6-267P-201ENST00000516714 103 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 MIR4520-1-201ENST00000582609 70 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 U2.7-201ENST00000619197 100 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 RNA5SP26-201ENST00000362406 119 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 RNU6-22P-201ENST00000384355 107 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 MIR507-201ENST00000385234 94 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 MIR548Q-201ENST00000408404 100 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 HLA-S-202ENST00000425174 53 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 MIR5591-201ENST00000578248 65 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 RNU6-633P-201ENST00000362612 103 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 RNU6-209P-201ENST00000384118 107 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 AL078595.1-201ENST00000404458 226 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 U6.81-201ENST00000612550 106 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 U6.95-201ENST00000636931 70 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 RNU6-164P-201ENST00000364604 103 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 RNU6-479P-201ENST00000516348 105 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 SNORA40.13-201ENST00000516379 120 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 AC005520.4-201ENST00000604337 90 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms