Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 AC091912.2-201ENST00000624798 167 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 snoR1.1-201ENST00000628177 80 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR7515-201ENST00000637837 67 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 MIRLET7G-201ENST00000362280 84 ntBASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 RNA5SP190-201ENST00000365222 118 ntBASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 AL161935.2-201ENST00000414627 60 ntBASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 AC008834.1-201ENST00000511612 175 ntBASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU1-61P-201ENST00000516107 151 ntBASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU7-188P-201ENST00000517063 64 ntBASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR6779-201ENST00000617283 64 ntBASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 UCA1.1-201ENST00000620952 75 ntBASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.830-201ENST00000628531 96 ntBASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC0.62□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORA42.1-201ENST00000363515 137 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORA67.1-201ENST00000364749 141 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.564-201ENST00000384708 106 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR520F-201ENST00000384824 87 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR601-201ENST00000385256 79 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORA48.3-201ENST00000391081 134 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU11-3P-201ENST00000391111 133 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR1323-201ENST00000408090 73 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORD111-201ENST00000408139 94 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR4419B-201ENST00000577260 68 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORA70.25-201ENST00000612741 95 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR8070-201ENST00000616510 88 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 U4.2-201ENST00000618561 85 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
KRTAP4-3Q9BYR4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.103-201ENST00000363171 102 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORD114-26-201ENST00000363543 72 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORA16.1-201ENST00000364597 132 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR100-201ENST00000385259 80 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR548H1-201ENST00000408610 102 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 RNA5SP270-201ENST00000411361 118 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 AL353691.2-201ENST00000443795 59 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU2-58P-201ENST00000516403 183 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORA25.15-201ENST00000516487 89 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU6-229P-201ENST00000516614 102 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR23C-201ENST00000579846 100 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR5704-201ENST00000584029 77 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 RN7SL660P-201ENST00000614852 299 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.781-201ENST00000620301 103 ntBASIC0.6□□□□□ -2.31
KRTAP4-3Q9BYR4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORA31-201ENST00000362607 130 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.186-201ENST00000363899 92 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 RNA5SP363-201ENST00000365072 115 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU6-1034P-201ENST00000365335 101 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORD6-201ENST00000365444 73 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU1-148P-201ENST00000384472 162 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.513-201ENST00000384522 100 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 RNA5SP465-201ENST00000391195 109 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR1285-1-201ENST00000408593 84 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.603-201ENST00000410571 108 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 RNA5SP501-201ENST00000410990 112 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 AC079140.2-201ENST00000506193 142 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU1-40P-201ENST00000516816 164 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU1-97P-201ENST00000516872 164 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORA31.17-201ENST00000516953 127 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 AP000676.1-201ENST00000533307 52 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 AC023827.1-201ENST00000569247 97 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR6895-201ENST00000613497 78 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 AL391099.1-201ENST00000624635 187 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR6828-201ENST00000636181 60 ntBASIC0.59□□□□□ -2.31
KRTAP4-3Q9BYR4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC0.59□□□□□ -2.32
KRTAP4-3Q9BYR4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
KRTAP4-3Q9BYR4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC0.59□□□□□ -2.32
KRTAP4-3Q9BYR4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 AC090625.1-201ENST00000357130 210 ntBASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 RNU1-42P-201ENST00000364033 160 ntBASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 Y_RNA.284-201ENST00000364806 102 ntBASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 SNORD48-201ENST00000364953 64 ntBASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 MIR518A1-201ENST00000385068 85 ntBASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 SNORA26.4-201ENST00000391188 123 ntBASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 RNU1-92P-201ENST00000517017 135 ntBASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 MIR4723-201ENST00000585070 81 ntBASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 SNX3P1Y-201ENST00000615757 176 ntBASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 AL627230.5-201ENST00000619807 58 ntBASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 uc_338.36-201ENST00000622331 158 ntBASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
KRTAP4-3Q9BYR4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
KRTAP4-3Q9BYR4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC0.57□□□□□ -2.32
KRTAP4-3Q9BYR4 RNY4P27-201ENST00000363341 96 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms