Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 HMGN2P5-201ENST00000436882 273 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 AC114755.3-201ENST00000481111 251 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 Vault.1-201ENST00000516474 102 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 RNA5SP268-201ENST00000516828 124 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR2276-201ENST00000516886 89 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR5680-201ENST00000577577 84 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR4756-201ENST00000577874 78 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR4752-201ENST00000579672 72 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR3690-201ENST00000580266 75 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR151B-201ENST00000584249 96 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR7107-201ENST00000611489 80 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 AC084368.1-201ENST00000620935 65 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR8057-201ENST00000620957 69 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 AC074140.1-201ENST00000621617 208 ntBASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC0.6□□□□□ -2.31
KRTAP4-4Q9BYR3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR30E-201ENST00000362104 92 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR449A-201ENST00000362113 91 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 SNORD114-5-201ENST00000362928 70 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 Y_RNA.103-201ENST00000363171 102 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR93-201ENST00000385024 80 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR876-201ENST00000401147 81 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 RNA5SP501-201ENST00000410990 112 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 AC108938.1-201ENST00000451204 136 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 SNORA31.17-201ENST00000516953 127 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 AC026333.2-201ENST00000542164 106 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 AL360157.1-201ENST00000565962 87 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR4748-201ENST00000578076 82 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR4285-201ENST00000581001 85 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR4677-201ENST00000584153 80 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 SNX3P1Y-201ENST00000615757 176 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC0.59□□□□□ -2.31
KRTAP4-4Q9BYR3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC0.59□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR422A-201ENST00000362286 90 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 RNA5SP257-201ENST00000363023 116 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORA80A-201ENST00000363922 136 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORD21-201ENST00000383953 95 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 HIST1H2APS3-201ENST00000403259 134 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 Z95118.1-201ENST00000421372 247 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 UBBP3-201ENST00000445497 241 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 AC048334.1-201ENST00000477975 159 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 AC079804.2-201ENST00000490376 200 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU1-40P-201ENST00000516816 164 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU1-97P-201ENST00000516872 164 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR4738-201ENST00000579134 87 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR486-1-201ENST00000612171 68 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC0.58□□□□□ -2.32
KRTAP4-4Q9BYR3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORA31-201ENST00000362607 130 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU1-18P-201ENST00000363062 164 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU1-51P-201ENST00000365345 176 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORA44-201ENST00000384584 132 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU1-89P-201ENST00000384592 164 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU6-455P-201ENST00000384681 107 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 RNA5SP210-201ENST00000391034 120 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 AL591704.2-201ENST00000421658 181 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 AL603825.1-201ENST00000438481 80 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORD105B-201ENST00000458770 79 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 snoU13.15-201ENST00000459407 104 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU7-21P-201ENST00000459430 62 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORD18.2-201ENST00000459604 70 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 SCARNA20.6-201ENST00000517251 106 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR2682-201ENST00000580305 110 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR3123-201ENST00000583417 75 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 U1.36-201ENST00000620684 176 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 AP003355.3-201ENST00000623465 114 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR664B-201ENST00000626756 61 ntBASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 WARS-244ENST00000627608 123 ntTSL 5 BASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
KRTAP4-4Q9BYR3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR148A-201ENST00000362215 68 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 RNA5SP457-201ENST00000363657 124 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORA32.1-201ENST00000364514 115 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORD74.6-201ENST00000364796 70 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORA54-201ENST00000384281 123 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR1285-2-201ENST00000408311 88 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU7-90P-201ENST00000459216 62 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms