Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RNU7-165P-201ENST00000458864 60 ntBASIC0.12□□□□□ -2.39
LCE3DQ9BYE3 RNU7-119P-201ENST00000459279 63 ntBASIC0.12□□□□□ -2.39
LCE3DQ9BYE3 MIR6514-201ENST00000622549 70 ntBASIC0.12□□□□□ -2.39
LCE3DQ9BYE3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.11□□□□□ -2.39
LCE3DQ9BYE3 RNU6-46P-201ENST00000383860 107 ntBASIC0.11□□□□□ -2.39
LCE3DQ9BYE3 SNORA50A-201ENST00000384225 134 ntBASIC0.11□□□□□ -2.39
LCE3DQ9BYE3 RNU6-1184P-201ENST00000384588 108 ntBASIC0.11□□□□□ -2.39
LCE3DQ9BYE3 RNU6-246P-201ENST00000384702 107 ntBASIC0.11□□□□□ -2.39
LCE3DQ9BYE3 SNORA11-201ENST00000408789 128 ntBASIC0.11□□□□□ -2.39
LCE3DQ9BYE3 AC104692.1-201ENST00000472406 90 ntBASIC0.11□□□□□ -2.39
LCE3DQ9BYE3 RNA5SP134-201ENST00000516492 96 ntBASIC0.11□□□□□ -2.39
LCE3DQ9BYE3 MIR4432-201ENST00000581823 84 ntBASIC0.11□□□□□ -2.39
LCE3DQ9BYE3 AL353997.5-201ENST00000618886 171 ntBASIC0.11□□□□□ -2.39
LCE3DQ9BYE3 MIR373-201ENST00000362273 69 ntBASIC0.1□□□□□ -2.39
LCE3DQ9BYE3 RNU6-829P-201ENST00000363700 112 ntBASIC0.1□□□□□ -2.39
LCE3DQ9BYE3 SNORA41B-201ENST00000384785 128 ntBASIC0.1□□□□□ -2.39
LCE3DQ9BYE3 RNU6-1246P-201ENST00000391064 107 ntBASIC0.1□□□□□ -2.39
LCE3DQ9BYE3 RNU7-159P-201ENST00000459284 62 ntBASIC0.1□□□□□ -2.39
LCE3DQ9BYE3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.1□□□□□ -2.39
LCE3DQ9BYE3 AL353803.5-201ENST00000599815 141 ntBASIC0.1□□□□□ -2.39
LCE3DQ9BYE3 MIR5087-201ENST00000635826 76 ntBASIC0.1□□□□□ -2.39
LCE3DQ9BYE3 RNA5SP347-201ENST00000362445 119 ntBASIC0.09□□□□□ -2.4
LCE3DQ9BYE3 RNU6-1079P-201ENST00000362861 110 ntBASIC0.09□□□□□ -2.4
LCE3DQ9BYE3 SNORD114-27-201ENST00000363766 70 ntBASIC0.09□□□□□ -2.4
LCE3DQ9BYE3 Y_RNA.236-201ENST00000364427 111 ntBASIC0.09□□□□□ -2.4
LCE3DQ9BYE3 MIR633-201ENST00000384821 98 ntBASIC0.09□□□□□ -2.4
LCE3DQ9BYE3 MIR527-201ENST00000385244 85 ntBASIC0.09□□□□□ -2.4
LCE3DQ9BYE3 RNA5SP163-201ENST00000410304 99 ntBASIC0.09□□□□□ -2.4
LCE3DQ9BYE3 AP000676.1-201ENST00000533307 52 ntBASIC0.09□□□□□ -2.4
LCE3DQ9BYE3 MIR6507-201ENST00000613630 70 ntBASIC0.09□□□□□ -2.4
LCE3DQ9BYE3 AL391099.1-201ENST00000624635 187 ntBASIC0.09□□□□□ -2.4
LCE3DQ9BYE3 snoR1.1-201ENST00000628177 80 ntBASIC0.09□□□□□ -2.4
LCE3DQ9BYE3 RNU6-446P-201ENST00000362827 106 ntBASIC0.08□□□□□ -2.4
LCE3DQ9BYE3 RNA5SP325-201ENST00000363756 130 ntBASIC0.08□□□□□ -2.4
LCE3DQ9BYE3 MIR145-201ENST00000384967 88 ntBASIC0.08□□□□□ -2.4
LCE3DQ9BYE3 MIR643-201ENST00000385267 97 ntBASIC0.08□□□□□ -2.4
LCE3DQ9BYE3 RNU6-231P-201ENST00000517122 103 ntBASIC0.08□□□□□ -2.4
LCE3DQ9BYE3 CYP3A137P-201ENST00000562436 69 ntBASIC0.08□□□□□ -2.4
LCE3DQ9BYE3 AC104408.1-201ENST00000605241 170 ntBASIC0.08□□□□□ -2.4
LCE3DQ9BYE3 MIR1295B-201ENST00000636144 60 ntBASIC0.08□□□□□ -2.4
LCE3DQ9BYE3 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 RNU6-392P-201ENST00000364926 101 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 RNU6-458P-201ENST00000384179 107 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 RNU6-455P-201ENST00000384681 107 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 RNU6-987P-201ENST00000384759 104 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 RNU6-1133P-201ENST00000410963 100 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 AC244250.2-201ENST00000418731 148 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 RNU7-160P-201ENST00000516660 62 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 MIR3945-201ENST00000581853 98 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 MIR4290-201ENST00000583807 95 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 AC108676.2-201ENST00000605225 163 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 U6.58-201ENST00000613107 107 ntBASIC0.07□□□□□ -2.4
LCE3DQ9BYE3 MIR655-201ENST00000362159 97 ntBASIC0.06□□□□□ -2.4
LCE3DQ9BYE3 SNORD1B-201ENST00000363091 84 ntBASIC0.06□□□□□ -2.4
LCE3DQ9BYE3 RNA5SP214-201ENST00000363378 118 ntBASIC0.06□□□□□ -2.4
LCE3DQ9BYE3 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.06□□□□□ -2.4
LCE3DQ9BYE3 MTND4LP19-201ENST00000403051 166 ntBASIC0.06□□□□□ -2.4
LCE3DQ9BYE3 snoU13.23-201ENST00000458863 104 ntBASIC0.06□□□□□ -2.4
LCE3DQ9BYE3 Y_RNA.698-201ENST00000516798 118 ntBASIC0.06□□□□□ -2.4
LCE3DQ9BYE3 MIR4464-201ENST00000580818 92 ntBASIC0.06□□□□□ -2.4
LCE3DQ9BYE3 MIR5093-201ENST00000583199 100 ntBASIC0.06□□□□□ -2.4
LCE3DQ9BYE3 MIR7110-201ENST00000612638 86 ntBASIC0.06□□□□□ -2.4
LCE3DQ9BYE3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
LCE3DQ9BYE3 Y_RNA.109-201ENST00000363215 102 ntBASIC0.05□□□□□ -2.4
LCE3DQ9BYE3 RNA5SP499-201ENST00000363982 119 ntBASIC0.05□□□□□ -2.4
LCE3DQ9BYE3 RNU6-614P-201ENST00000384369 107 ntBASIC0.05□□□□□ -2.4
LCE3DQ9BYE3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
LCE3DQ9BYE3 RNU6-696P-201ENST00000390834 107 ntBASIC0.05□□□□□ -2.4
LCE3DQ9BYE3 RNU4-37P-201ENST00000410214 84 ntBASIC0.05□□□□□ -2.4
LCE3DQ9BYE3 MIR548AG1-201ENST00000579932 66 ntBASIC0.05□□□□□ -2.4
LCE3DQ9BYE3 U6.59-201ENST00000615686 107 ntBASIC0.05□□□□□ -2.4
LCE3DQ9BYE3 AL445584.3-201ENST00000617173 78 ntBASIC0.05□□□□□ -2.4
LCE3DQ9BYE3 RNU6-924P-201ENST00000362926 108 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 SNORA18.1-201ENST00000363418 128 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 SNORD74.6-201ENST00000364796 70 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 SNORD49B-201ENST00000365172 72 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 MIR593-201ENST00000384856 100 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 MIR764-201ENST00000390811 85 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 RNU6-141P-201ENST00000410499 105 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 Y_RNA.613-201ENST00000410726 97 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 RNU6-321P-201ENST00000410912 106 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 RNA5SP247-201ENST00000411181 105 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 SNORA13-201ENST00000458790 133 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 SNORA40.16-201ENST00000517238 121 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 MIR4714-201ENST00000580728 77 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 snoU13.31-201ENST00000607291 104 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 MIR6854-201ENST00000614935 69 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 MIR6888-201ENST00000621977 67 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 MIR6767-201ENST00000637302 66 ntBASIC0.04□□□□□ -2.4
LCE3DQ9BYE3 SNORD56B-201ENST00000384713 71 ntBASIC0.03□□□□□ -2.4
LCE3DQ9BYE3 SNORA40B-201ENST00000385573 128 ntBASIC0.03□□□□□ -2.4
LCE3DQ9BYE3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.03□□□□□ -2.4
LCE3DQ9BYE3 TRMT112P2-201ENST00000512910 132 ntBASIC0.03□□□□□ -2.4
LCE3DQ9BYE3 RNA5SP102-201ENST00000516865 106 ntBASIC0.03□□□□□ -2.4
LCE3DQ9BYE3 MIR4263-201ENST00000584745 83 ntBASIC0.03□□□□□ -2.4
LCE3DQ9BYE3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.03□□□□□ -2.4
LCE3DQ9BYE3 SNORD114-5-201ENST00000362928 70 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 1326.5 ms