Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MIR3121-201ENST00000579680 77 ntBASIC-3.95□□□□□ -3.04
SCAPERQ9BY12 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.95□□□□□ -3.04
SCAPERQ9BY12 MIR3688-2-201ENST00000636963 87 ntBASIC-3.95□□□□□ -3.04
SCAPERQ9BY12 RNU6-493P-201ENST00000391321 108 ntBASIC-3.95□□□□□ -3.04
SCAPERQ9BY12 MIR1263-201ENST00000408324 86 ntBASIC-3.95□□□□□ -3.04
SCAPERQ9BY12 Y_RNA.387-201ENST00000383918 102 ntBASIC-3.96□□□□□ -3.04
SCAPERQ9BY12 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.96□□□□□ -3.04
SCAPERQ9BY12 RNU6-530P-201ENST00000391180 107 ntBASIC-3.97□□□□□ -3.05
SCAPERQ9BY12 MIR548N-201ENST00000408742 75 ntBASIC-3.97□□□□□ -3.05
SCAPERQ9BY12 MIR548P-201ENST00000408336 84 ntBASIC-3.98□□□□□ -3.05
SCAPERQ9BY12 MTND1P19-201ENST00000511780 315 ntBASIC-3.98□□□□□ -3.05
SCAPERQ9BY12 RNU6-1318P-201ENST00000365389 103 ntBASIC-3.99□□□□□ -3.05
SCAPERQ9BY12 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.99□□□□□ -3.05
SCAPERQ9BY12 AL450471.1-201ENST00000447509 127 ntBASIC-3.99□□□□□ -3.05
SCAPERQ9BY12 MTND5P22-201ENST00000458380 195 ntBASIC-3.99□□□□□ -3.05
SCAPERQ9BY12 Y_RNA.26-201ENST00000362539 101 ntBASIC-4□□□□□ -3.05
SCAPERQ9BY12 RNU6-698P-201ENST00000363523 107 ntBASIC-4□□□□□ -3.05
SCAPERQ9BY12 SNORD45B-201ENST00000364617 72 ntBASIC-4□□□□□ -3.05
SCAPERQ9BY12 Y_RNA.276-201ENST00000364732 109 ntBASIC-4□□□□□ -3.05
SCAPERQ9BY12 RNU6-34P-201ENST00000364874 107 ntBASIC-4□□□□□ -3.05
SCAPERQ9BY12 Y_RNA.645-201ENST00000391229 102 ntBASIC-4□□□□□ -3.05
SCAPERQ9BY12 Y_RNA.63-201ENST00000362841 102 ntBASIC-4.01□□□□□ -3.05
SCAPERQ9BY12 RNY3P2-201ENST00000362918 102 ntBASIC-4.01□□□□□ -3.05
SCAPERQ9BY12 Y_RNA.292-201ENST00000364904 97 ntBASIC-4.01□□□□□ -3.05
SCAPERQ9BY12 RNU6-800P-201ENST00000384473 103 ntBASIC-4.02□□□□□ -3.05
SCAPERQ9BY12 MTND3P3-201ENST00000505004 126 ntBASIC-4.02□□□□□ -3.05
SCAPERQ9BY12 MIR4796-201ENST00000580742 81 ntBASIC-4.02□□□□□ -3.05
SCAPERQ9BY12 RNU6-450P-201ENST00000364654 107 ntBASIC-4.03□□□□□ -3.05
SCAPERQ9BY12 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-4.03□□□□□ -3.05
SCAPERQ9BY12 U4.4-201ENST00000620626 117 ntBASIC-4.03□□□□□ -3.05
SCAPERQ9BY12 Y_RNA.95-201ENST00000363079 95 ntBASIC-4.04□□□□□ -3.06
SCAPERQ9BY12 RNU6-523P-201ENST00000516304 54 ntBASIC-4.04□□□□□ -3.06
SCAPERQ9BY12 AC025166.1-201ENST00000612411 163 ntBASIC-4.04□□□□□ -3.06
SCAPERQ9BY12 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-4.04□□□□□ -3.06
SCAPERQ9BY12 MIR202-201ENST00000362219 110 ntBASIC-4.04□□□□□ -3.06
SCAPERQ9BY12 MIR1254-1-201ENST00000408257 97 ntBASIC-4.04□□□□□ -3.06
SCAPERQ9BY12 RNU7-151P-201ENST00000516930 53 ntBASIC-4.04□□□□□ -3.06
SCAPERQ9BY12 Y_RNA.237-201ENST00000364439 102 ntBASIC-4.05□□□□□ -3.06
SCAPERQ9BY12 RNU6-974P-201ENST00000384099 108 ntBASIC-4.05□□□□□ -3.06
SCAPERQ9BY12 SNORD37.2-201ENST00000391075 66 ntBASIC-4.05□□□□□ -3.06
SCAPERQ9BY12 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-4.05□□□□□ -3.06
SCAPERQ9BY12 AC130289.1-201ENST00000577321 73 ntBASIC-4.05□□□□□ -3.06
SCAPERQ9BY12 MIR3613-201ENST00000579844 87 ntBASIC-4.05□□□□□ -3.06
SCAPERQ9BY12 MIR379-201ENST00000362218 67 ntBASIC-4.06□□□□□ -3.06
SCAPERQ9BY12 AL160413.1-201ENST00000622780 310 ntBASIC-4.06□□□□□ -3.06
SCAPERQ9BY12 Y_RNA.309-201ENST00000365046 111 ntBASIC-4.07□□□□□ -3.06
SCAPERQ9BY12 RNU6-649P-201ENST00000384463 107 ntBASIC-4.07□□□□□ -3.06
SCAPERQ9BY12 MIR548AJ2-201ENST00000408539 92 ntBASIC-4.07□□□□□ -3.06
SCAPERQ9BY12 AL359920.1-201ENST00000618332 176 ntBASIC-4.07□□□□□ -3.06
SCAPERQ9BY12 Y_RNA.384-201ENST00000383909 102 ntBASIC-4.08□□□□□ -3.06
SCAPERQ9BY12 MIR548V-201ENST00000584165 80 ntBASIC-4.08□□□□□ -3.06
SCAPERQ9BY12 Y_RNA.321-201ENST00000365149 102 ntBASIC-4.09□□□□□ -3.06
SCAPERQ9BY12 SNORD116-16-201ENST00000384533 92 ntBASIC-4.09□□□□□ -3.06
SCAPERQ9BY12 RNU6-1153P-201ENST00000516760 105 ntBASIC-4.09□□□□□ -3.06
SCAPERQ9BY12 Y_RNA.563-201ENST00000384707 108 ntBASIC-4.1□□□□□ -3.07
SCAPERQ9BY12 RNU6-520P-201ENST00000384717 104 ntBASIC-4.1□□□□□ -3.07
SCAPERQ9BY12 Y_RNA.455-201ENST00000384230 98 ntBASIC-4.11□□□□□ -3.07
SCAPERQ9BY12 SNORA17.4-201ENST00000391287 132 ntBASIC-4.11□□□□□ -3.07
SCAPERQ9BY12 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-4.11□□□□□ -3.07
SCAPERQ9BY12 U4.5-201ENST00000617137 123 ntBASIC-4.11□□□□□ -3.07
SCAPERQ9BY12 SNORD113-2-201ENST00000391082 72 ntBASIC-4.12□□□□□ -3.07
SCAPERQ9BY12 MIR1277-201ENST00000408536 78 ntBASIC-4.12□□□□□ -3.07
SCAPERQ9BY12 Y_RNA.279-201ENST00000364763 95 ntBASIC-4.12□□□□□ -3.07
SCAPERQ9BY12 Y_RNA.307-201ENST00000365022 117 ntBASIC-4.12□□□□□ -3.07
SCAPERQ9BY12 MIR579-201ENST00000385221 98 ntBASIC-4.12□□□□□ -3.07
SCAPERQ9BY12 RNU6-68P-201ENST00000516576 104 ntBASIC-4.12□□□□□ -3.07
SCAPERQ9BY12 MIR4643-201ENST00000577473 78 ntBASIC-4.12□□□□□ -3.07
SCAPERQ9BY12 SNORD1B-201ENST00000363091 84 ntBASIC-4.14□□□□□ -3.07
SCAPERQ9BY12 MIR630-201ENST00000384957 97 ntBASIC-4.14□□□□□ -3.07
SCAPERQ9BY12 MIR1236-201ENST00000408340 102 ntBASIC-4.14□□□□□ -3.07
SCAPERQ9BY12 AC090971.5-201ENST00000621102 293 ntBASIC-4.14□□□□□ -3.07
SCAPERQ9BY12 MIR7978-201ENST00000636158 59 ntBASIC-4.14□□□□□ -3.07
SCAPERQ9BY12 Y_RNA.210-201ENST00000364161 110 ntBASIC-4.15□□□□□ -3.07
SCAPERQ9BY12 SNORD127-201ENST00000458892 86 ntBASIC-4.15□□□□□ -3.07
SCAPERQ9BY12 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-4.16□□□□□ -3.08
SCAPERQ9BY12 Y_RNA.663-201ENST00000516043 101 ntBASIC-4.16□□□□□ -3.08
SCAPERQ9BY12 Y_RNA.668-201ENST00000516233 93 ntBASIC-4.16□□□□□ -3.08
SCAPERQ9BY12 SNORD115-37-201ENST00000363768 82 ntBASIC-4.17□□□□□ -3.08
SCAPERQ9BY12 Y_RNA.197-201ENST00000364004 102 ntBASIC-4.17□□□□□ -3.08
SCAPERQ9BY12 MIR1302-6-201ENST00000408466 90 ntBASIC-4.17□□□□□ -3.08
SCAPERQ9BY12 AC069439.1-201ENST00000494739 167 ntBASIC-4.17□□□□□ -3.08
SCAPERQ9BY12 Y_RNA.47-201ENST00000362697 108 ntBASIC-4.18□□□□□ -3.08
SCAPERQ9BY12 Y_RNA.281-201ENST00000364774 94 ntBASIC-4.18□□□□□ -3.08
SCAPERQ9BY12 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.18□□□□□ -3.08
SCAPERQ9BY12 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-4.18□□□□□ -3.08
SCAPERQ9BY12 DNAJC19P2-201ENST00000593340 302 ntBASIC-4.18□□□□□ -3.08
SCAPERQ9BY12 RNU6-867P-201ENST00000364956 107 ntBASIC-4.19□□□□□ -3.08
SCAPERQ9BY12 RNY4P18-201ENST00000391107 89 ntBASIC-4.19□□□□□ -3.08
SCAPERQ9BY12 Y_RNA.604-201ENST00000410574 102 ntBASIC-4.19□□□□□ -3.08
SCAPERQ9BY12 RNU6-345P-201ENST00000517001 107 ntBASIC-4.19□□□□□ -3.08
SCAPERQ9BY12 MIR3658-201ENST00000636291 56 ntBASIC-4.19□□□□□ -3.08
SCAPERQ9BY12 RNU6-668P-201ENST00000364180 107 ntBASIC-4.2□□□□□ -3.08
SCAPERQ9BY12 Y_RNA.435-201ENST00000384095 112 ntBASIC-4.2□□□□□ -3.08
SCAPERQ9BY12 RNU6-277P-201ENST00000516272 106 ntBASIC-4.2□□□□□ -3.08
SCAPERQ9BY12 MIR4777-201ENST00000583710 86 ntBASIC-4.2□□□□□ -3.08
SCAPERQ9BY12 MIR3974-201ENST00000637126 96 ntBASIC-4.2□□□□□ -3.08
SCAPERQ9BY12 RNU6-361P-201ENST00000364454 107 ntBASIC-4.21□□□□□ -3.08
SCAPERQ9BY12 SNORD58A-201ENST00000383875 65 ntBASIC-4.21□□□□□ -3.08
SCAPERQ9BY12 RNU6-239P-201ENST00000390990 99 ntBASIC-4.21□□□□□ -3.08
SCAPERQ9BY12 MIR125B1-201ENST00000385236 88 ntBASIC-4.21□□□□□ -3.08
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms