Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC012531.4-201ENST00000616509 177 ntBASIC-1.66□□□□□ -2.68
ECHDC3Q96DC8 RNU5F-1-201ENST00000362507 117 ntBASIC-1.67□□□□□ -2.68
ECHDC3Q96DC8 RNU6-924P-201ENST00000362926 108 ntBASIC-1.67□□□□□ -2.68
ECHDC3Q96DC8 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.67□□□□□ -2.68
ECHDC3Q96DC8 MIR3914-2-201ENST00000637339 95 ntBASIC-1.67□□□□□ -2.68
ECHDC3Q96DC8 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.68□□□□□ -2.68
ECHDC3Q96DC8 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.68□□□□□ -2.68
ECHDC3Q96DC8 MIR203A-201ENST00000384836 110 ntBASIC-1.68□□□□□ -2.68
ECHDC3Q96DC8 SNORA40-201ENST00000388090 126 ntBASIC-1.68□□□□□ -2.68
ECHDC3Q96DC8 RNU7-107P-201ENST00000459121 61 ntBASIC-1.68□□□□□ -2.68
ECHDC3Q96DC8 AC108019.1-201ENST00000512540 175 ntBASIC-1.68□□□□□ -2.68
ECHDC3Q96DC8 RNU6-795P-201ENST00000516323 103 ntBASIC-1.68□□□□□ -2.68
ECHDC3Q96DC8 RNY4-201ENST00000516507 96 ntBASIC-1.68□□□□□ -2.68
ECHDC3Q96DC8 U6.81-201ENST00000612550 106 ntBASIC-1.68□□□□□ -2.68
ECHDC3Q96DC8 SNORD58A-201ENST00000383875 65 ntBASIC-1.69□□□□□ -2.68
ECHDC3Q96DC8 MIR29B1-201ENST00000385015 81 ntBASIC-1.69□□□□□ -2.68
ECHDC3Q96DC8 SNORA26.4-201ENST00000391188 123 ntBASIC-1.69□□□□□ -2.68
ECHDC3Q96DC8 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.69□□□□□ -2.68
ECHDC3Q96DC8 MIR4756-201ENST00000577874 78 ntBASIC-1.69□□□□□ -2.68
ECHDC3Q96DC8 MIR664B-201ENST00000626756 61 ntBASIC-1.69□□□□□ -2.68
ECHDC3Q96DC8 SNORD115-33-201ENST00000363723 82 ntBASIC-1.7□□□□□ -2.68
ECHDC3Q96DC8 MIR521-2-201ENST00000384818 87 ntBASIC-1.7□□□□□ -2.68
ECHDC3Q96DC8 MIR487B-201ENST00000385021 84 ntBASIC-1.7□□□□□ -2.68
ECHDC3Q96DC8 RNU6-257P-201ENST00000410238 98 ntBASIC-1.7□□□□□ -2.68
ECHDC3Q96DC8 RNU7-154P-201ENST00000516194 62 ntBASIC-1.7□□□□□ -2.68
ECHDC3Q96DC8 RNU6-886P-201ENST00000384319 105 ntBASIC-1.71□□□□□ -2.68
ECHDC3Q96DC8 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.71□□□□□ -2.68
ECHDC3Q96DC8 RNU6-972P-201ENST00000391208 107 ntBASIC-1.71□□□□□ -2.68
ECHDC3Q96DC8 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.71□□□□□ -2.68
ECHDC3Q96DC8 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.72□□□□□ -2.68
ECHDC3Q96DC8 AL691482.2-201ENST00000457453 84 ntBASIC-1.72□□□□□ -2.68
ECHDC3Q96DC8 SNORD63.1-201ENST00000516178 80 ntBASIC-1.72□□□□□ -2.68
ECHDC3Q96DC8 RNU6-746P-201ENST00000384112 109 ntBASIC-1.73□□□□□ -2.69
ECHDC3Q96DC8 MT-TM-201ENST00000387377 68 ntBASIC-1.73□□□□□ -2.69
ECHDC3Q96DC8 RNU6-182P-201ENST00000516970 105 ntBASIC-1.73□□□□□ -2.69
ECHDC3Q96DC8 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.74□□□□□ -2.69
ECHDC3Q96DC8 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.74□□□□□ -2.69
ECHDC3Q96DC8 SNORD33.1-201ENST00000516213 88 ntBASIC-1.74□□□□□ -2.69
ECHDC3Q96DC8 MIR6739-201ENST00000622461 75 ntBASIC-1.74□□□□□ -2.69
ECHDC3Q96DC8 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.75□□□□□ -2.69
ECHDC3Q96DC8 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.75□□□□□ -2.69
ECHDC3Q96DC8 RNU6-887P-201ENST00000410660 100 ntBASIC-1.75□□□□□ -2.69
ECHDC3Q96DC8 RNU7-200P-201ENST00000516105 62 ntBASIC-1.75□□□□□ -2.69
ECHDC3Q96DC8 RNU6-576P-201ENST00000390854 102 ntBASIC-1.76□□□□□ -2.69
ECHDC3Q96DC8 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.76□□□□□ -2.69
ECHDC3Q96DC8 SCARNA23-201ENST00000516060 130 ntBASIC-1.76□□□□□ -2.69
ECHDC3Q96DC8 RNU6-904P-201ENST00000516206 101 ntBASIC-1.76□□□□□ -2.69
ECHDC3Q96DC8 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.76□□□□□ -2.69
ECHDC3Q96DC8 U6.95-201ENST00000636931 70 ntBASIC-1.76□□□□□ -2.69
ECHDC3Q96DC8 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.77□□□□□ -2.69
ECHDC3Q96DC8 MIR519A2-201ENST00000384990 87 ntBASIC-1.77□□□□□ -2.69
ECHDC3Q96DC8 MIR507-201ENST00000385234 94 ntBASIC-1.77□□□□□ -2.69
ECHDC3Q96DC8 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.77□□□□□ -2.69
ECHDC3Q96DC8 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.77□□□□□ -2.69
ECHDC3Q96DC8 MIR4796-201ENST00000580742 81 ntBASIC-1.77□□□□□ -2.69
ECHDC3Q96DC8 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.77□□□□□ -2.69
ECHDC3Q96DC8 MIR6818-201ENST00000621576 65 ntBASIC-1.77□□□□□ -2.69
ECHDC3Q96DC8 MIR548A3-201ENST00000385297 97 ntBASIC-1.78□□□□□ -2.69
ECHDC3Q96DC8 RNU2-51P-201ENST00000410708 197 ntBASIC-1.78□□□□□ -2.69
ECHDC3Q96DC8 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.79□□□□□ -2.7
ECHDC3Q96DC8 SNORD116-10-201ENST00000363791 102 ntBASIC-1.79□□□□□ -2.7
ECHDC3Q96DC8 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.79□□□□□ -2.7
ECHDC3Q96DC8 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.79□□□□□ -2.7
ECHDC3Q96DC8 RNU6-752P-201ENST00000516376 102 ntBASIC-1.79□□□□□ -2.7
ECHDC3Q96DC8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.79□□□□□ -2.7
ECHDC3Q96DC8 MIR6874-201ENST00000635894 71 ntBASIC-1.79□□□□□ -2.7
ECHDC3Q96DC8 RNA5SP405-201ENST00000363059 114 ntBASIC-1.8□□□□□ -2.7
ECHDC3Q96DC8 SNORD115-22-201ENST00000364456 82 ntBASIC-1.8□□□□□ -2.7
ECHDC3Q96DC8 RNU6-80P-201ENST00000384195 107 ntBASIC-1.8□□□□□ -2.7
ECHDC3Q96DC8 RNU6-971P-201ENST00000516920 106 ntBASIC-1.8□□□□□ -2.7
ECHDC3Q96DC8 SNORA19.1-201ENST00000410656 129 ntBASIC-1.81□□□□□ -2.7
ECHDC3Q96DC8 RNU6-659P-201ENST00000516454 104 ntBASIC-1.81□□□□□ -2.7
ECHDC3Q96DC8 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.82□□□□□ -2.7
ECHDC3Q96DC8 MIR1236-201ENST00000408340 102 ntBASIC-1.82□□□□□ -2.7
ECHDC3Q96DC8 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.82□□□□□ -2.7
ECHDC3Q96DC8 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.82□□□□□ -2.7
ECHDC3Q96DC8 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.83□□□□□ -2.7
ECHDC3Q96DC8 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.83□□□□□ -2.7
ECHDC3Q96DC8 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.83□□□□□ -2.7
ECHDC3Q96DC8 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.84□□□□□ -2.7
ECHDC3Q96DC8 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.84□□□□□ -2.7
ECHDC3Q96DC8 AL021921.1-201ENST00000442774 93 ntBASIC-1.84□□□□□ -2.7
ECHDC3Q96DC8 RNU6-518P-201ENST00000516056 96 ntBASIC-1.84□□□□□ -2.7
ECHDC3Q96DC8 RNU6-537P-201ENST00000517277 103 ntBASIC-1.84□□□□□ -2.7
ECHDC3Q96DC8 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.85□□□□□ -2.71
ECHDC3Q96DC8 AL353691.2-201ENST00000443795 59 ntBASIC-1.85□□□□□ -2.71
ECHDC3Q96DC8 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.85□□□□□ -2.71
ECHDC3Q96DC8 RNA5SP26-201ENST00000362406 119 ntBASIC-1.86□□□□□ -2.71
ECHDC3Q96DC8 RNY1P5-201ENST00000383890 115 ntBASIC-1.86□□□□□ -2.71
ECHDC3Q96DC8 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.87□□□□□ -2.71
ECHDC3Q96DC8 RNU4-61P-201ENST00000411243 107 ntBASIC-1.87□□□□□ -2.71
ECHDC3Q96DC8 RNU6-340P-201ENST00000364005 107 ntBASIC-1.88□□□□□ -2.71
ECHDC3Q96DC8 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.88□□□□□ -2.71
ECHDC3Q96DC8 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.88□□□□□ -2.71
ECHDC3Q96DC8 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.88□□□□□ -2.71
ECHDC3Q96DC8 AL450471.1-201ENST00000447509 127 ntBASIC-1.89□□□□□ -2.71
ECHDC3Q96DC8 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.9□□□□□ -2.71
ECHDC3Q96DC8 SNORD115-27-201ENST00000364430 82 ntBASIC-1.9□□□□□ -2.71
ECHDC3Q96DC8 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.9□□□□□ -2.71
ECHDC3Q96DC8 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms