Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 AP001340.1-201ENST00000624405 217 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 RNU6-151P-201ENST00000364158 107 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 RNU6-915P-201ENST00000364943 103 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 MIR3657-201ENST00000584818 117 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 RNU7-160P-201ENST00000516660 62 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 RNU6-807P-201ENST00000516805 107 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 AC012531.4-201ENST00000616509 177 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 RNU6-106P-201ENST00000384405 107 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 RNU6-478P-201ENST00000363904 110 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 MIR548A1-201ENST00000385041 97 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 RNU7-153P-201ENST00000516455 62 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 AC020661.2-201ENST00000560114 134 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 MIR379-201ENST00000362218 67 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 RNU6-824P-201ENST00000363724 104 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 AL021921.1-201ENST00000442774 93 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 SNORD90-201ENST00000391145 111 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 RNU6-695P-201ENST00000391157 104 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 MIR548Q-201ENST00000408404 100 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 MIR3170-201ENST00000582699 77 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 MIR548V-201ENST00000584165 80 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 MIR6874-201ENST00000635894 71 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 SNORD33.1-201ENST00000516213 88 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 U4.4-201ENST00000620626 117 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 RNU6-696P-201ENST00000390834 107 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 RPL35AP4-201ENST00000412007 102 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 AL589823.1-201ENST00000429577 183 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 MTATP8P1-201ENST00000467115 207 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.45□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 MIR548AG1-201ENST00000579932 66 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 RNU6-340P-201ENST00000364005 107 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 RNU6-275P-201ENST00000364910 107 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 SNORA19.1-201ENST00000410656 129 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 MIR4680-201ENST00000580906 66 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 RBMX2P4-201ENST00000441256 376 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 AC097484.2-201ENST00000509147 251 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 MIR513C-201ENST00000401352 84 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 RNU6-635P-201ENST00000516651 102 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 RNU6-971P-201ENST00000516920 106 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 MTND5P20-201ENST00000448677 143 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 MIR4643-201ENST00000577473 78 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 MTND4P29-201ENST00000503122 1372 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 RNY3P16-201ENST00000516338 101 ntBASIC-0.46□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.47□□□□□ -2.48
SYNE1Q8NF91 MTND4LP9-201ENST00000427694 174 ntBASIC-0.47□□□□□ -2.48
SYNE1Q8NF91 RNU6-426P-201ENST00000516464 97 ntBASIC-0.47□□□□□ -2.48
SYNE1Q8NF91 AC090617.8-201ENST00000623339 167 ntBASIC-0.47□□□□□ -2.48
SYNE1Q8NF91 RNU6-987P-201ENST00000384759 104 ntBASIC-0.47□□□□□ -2.48
SYNE1Q8NF91 RNU6-518P-201ENST00000516056 96 ntBASIC-0.47□□□□□ -2.48
SYNE1Q8NF91 U2.18-201ENST00000622185 84 ntBASIC-0.47□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.47□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.47□□□□□ -2.48
SYNE1Q8NF91 SNORD113-2-201ENST00000391082 72 ntBASIC-0.47□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.47□□□□□ -2.49
SYNE1Q8NF91 SNORA24B-201ENST00000384176 131 ntBASIC-0.47□□□□□ -2.49
SYNE1Q8NF91 U2.7-201ENST00000619197 100 ntBASIC-0.47□□□□□ -2.49
SYNE1Q8NF91 RNU6-698P-201ENST00000363523 107 ntBASIC-0.47□□□□□ -2.49
SYNE1Q8NF91 RNU6-34P-201ENST00000364874 107 ntBASIC-0.47□□□□□ -2.49
SYNE1Q8NF91 RNU6-80P-201ENST00000384195 107 ntBASIC-0.47□□□□□ -2.49
SYNE1Q8NF91 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.47□□□□□ -2.49
SYNE1Q8NF91 RNU6-861P-201ENST00000516745 106 ntBASIC-0.47□□□□□ -2.49
SYNE1Q8NF91 MIR3144-201ENST00000579460 79 ntBASIC-0.47□□□□□ -2.49
SYNE1Q8NF91 RNU6-682P-201ENST00000363843 106 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 RNU6-990P-201ENST00000364385 104 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 snoU13.10-201ENST00000459301 103 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 MIR4796-201ENST00000580742 81 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 RNU6-904P-201ENST00000516206 101 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 AC062037.2-201ENST00000610137 73 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 AL450471.1-201ENST00000447509 127 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 273.6 ms