Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
PRPF39Q86UA1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.11□□□□□ -2.59
PRPF39Q86UA1 SNORD115-22-201ENST00000364456 82 ntBASIC-1.12□□□□□ -2.59
PRPF39Q86UA1 RNU6-959P-201ENST00000384671 107 ntBASIC-1.12□□□□□ -2.59
PRPF39Q86UA1 snoU83B.1-201ENST00000517136 88 ntBASIC-1.12□□□□□ -2.59
PRPF39Q86UA1 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.13□□□□□ -2.59
PRPF39Q86UA1 AL035461.1-201ENST00000421490 332 ntBASIC-1.13□□□□□ -2.59
PRPF39Q86UA1 RNU7-134P-201ENST00000458997 64 ntBASIC-1.13□□□□□ -2.59
PRPF39Q86UA1 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.13□□□□□ -2.59
PRPF39Q86UA1 RNU6-924P-201ENST00000362926 108 ntBASIC-1.14□□□□□ -2.59
PRPF39Q86UA1 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.14□□□□□ -2.59
PRPF39Q86UA1 RNU7-154P-201ENST00000516194 62 ntBASIC-1.14□□□□□ -2.59
PRPF39Q86UA1 RNU2-51P-201ENST00000410708 197 ntBASIC-1.15□□□□□ -2.59
PRPF39Q86UA1 AC008267.6-201ENST00000441664 139 ntBASIC-1.15□□□□□ -2.59
PRPF39Q86UA1 RNU6-656P-201ENST00000516785 107 ntBASIC-1.15□□□□□ -2.59
PRPF39Q86UA1 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.15□□□□□ -2.59
PRPF39Q86UA1 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.15□□□□□ -2.59
PRPF39Q86UA1 MIR519C-201ENST00000385053 87 ntBASIC-1.16□□□□□ -2.6
PRPF39Q86UA1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
PRPF39Q86UA1 SNORA26.4-201ENST00000391188 123 ntBASIC-1.16□□□□□ -2.6
PRPF39Q86UA1 SCARNA17-201ENST00000516183 144 ntBASIC-1.16□□□□□ -2.6
PRPF39Q86UA1 RNU6-752P-201ENST00000516376 102 ntBASIC-1.16□□□□□ -2.6
PRPF39Q86UA1 SNORD77.2-201ENST00000391045 68 ntBASIC-1.17□□□□□ -2.6
PRPF39Q86UA1 RNU7-88P-201ENST00000458752 63 ntBASIC-1.17□□□□□ -2.6
PRPF39Q86UA1 RNA5SP266-201ENST00000410273 108 ntBASIC-1.18□□□□□ -2.6
PRPF39Q86UA1 MTATP8P2-201ENST00000435212 202 ntBASIC-1.18□□□□□ -2.6
PRPF39Q86UA1 RNU6-589P-201ENST00000516485 107 ntBASIC-1.18□□□□□ -2.6
PRPF39Q86UA1 AP002795.1-201ENST00000534879 84 ntBASIC-1.18□□□□□ -2.6
PRPF39Q86UA1 U2.7-201ENST00000619197 100 ntBASIC-1.18□□□□□ -2.6
PRPF39Q86UA1 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.19□□□□□ -2.6
PRPF39Q86UA1 RNU6-330P-201ENST00000363015 107 ntBASIC-1.19□□□□□ -2.6
PRPF39Q86UA1 SNORD115-33-201ENST00000363723 82 ntBASIC-1.19□□□□□ -2.6
PRPF39Q86UA1 RNA5SP331-201ENST00000364986 107 ntBASIC-1.19□□□□□ -2.6
PRPF39Q86UA1 RNU6-246P-201ENST00000384702 107 ntBASIC-1.19□□□□□ -2.6
PRPF39Q86UA1 RNY1P9-201ENST00000532431 109 ntBASIC-1.19□□□□□ -2.6
PRPF39Q86UA1 MIR378F-201ENST00000578143 78 ntBASIC-1.19□□□□□ -2.6
PRPF39Q86UA1 MIR450A1-201ENST00000362262 91 ntBASIC-1.2□□□□□ -2.6
PRPF39Q86UA1 RNU6-766P-201ENST00000362478 107 ntBASIC-1.2□□□□□ -2.6
PRPF39Q86UA1 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.2□□□□□ -2.6
PRPF39Q86UA1 AL021921.1-201ENST00000442774 93 ntBASIC-1.2□□□□□ -2.6
PRPF39Q86UA1 MIR4668-201ENST00000582284 70 ntBASIC-1.2□□□□□ -2.6
PRPF39Q86UA1 RNU6-633P-201ENST00000362612 103 ntBASIC-1.21□□□□□ -2.6
PRPF39Q86UA1 MT-TR-201ENST00000387439 65 ntBASIC-1.21□□□□□ -2.6
PRPF39Q86UA1 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.21□□□□□ -2.6
PRPF39Q86UA1 U7.5-201ENST00000517224 61 ntBASIC-1.21□□□□□ -2.6
PRPF39Q86UA1 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.21□□□□□ -2.6
PRPF39Q86UA1 SNORD19-201ENST00000391191 68 ntBASIC-1.22□□□□□ -2.6
PRPF39Q86UA1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.22□□□□□ -2.6
PRPF39Q86UA1 SNORD57-201ENST00000448188 72 ntBASIC-1.22□□□□□ -2.6
PRPF39Q86UA1 RNU6-267P-201ENST00000516714 103 ntBASIC-1.22□□□□□ -2.6
PRPF39Q86UA1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.22□□□□□ -2.6
PRPF39Q86UA1 RNU6-681P-201ENST00000364012 104 ntBASIC-1.23□□□□□ -2.61
PRPF39Q86UA1 RNU6-645P-201ENST00000364649 106 ntBASIC-1.23□□□□□ -2.61
PRPF39Q86UA1 RNU6-81P-201ENST00000365608 104 ntBASIC-1.23□□□□□ -2.61
PRPF39Q86UA1 RNU6-732P-201ENST00000516033 103 ntBASIC-1.23□□□□□ -2.61
PRPF39Q86UA1 RNA5SP26-201ENST00000362406 119 ntBASIC-1.24□□□□□ -2.61
PRPF39Q86UA1 MIR548C-201ENST00000384815 97 ntBASIC-1.24□□□□□ -2.61
PRPF39Q86UA1 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.24□□□□□ -2.61
PRPF39Q86UA1 MIR6818-201ENST00000621576 65 ntBASIC-1.24□□□□□ -2.61
PRPF39Q86UA1 RNU6-624P-201ENST00000363411 107 ntBASIC-1.25□□□□□ -2.61
PRPF39Q86UA1 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.25□□□□□ -2.61
PRPF39Q86UA1 MIR507-201ENST00000385234 94 ntBASIC-1.25□□□□□ -2.61
PRPF39Q86UA1 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.25□□□□□ -2.61
PRPF39Q86UA1 RNU6-219P-201ENST00000364728 107 ntBASIC-1.26□□□□□ -2.61
PRPF39Q86UA1 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.26□□□□□ -2.61
PRPF39Q86UA1 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.26□□□□□ -2.61
PRPF39Q86UA1 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.26□□□□□ -2.61
PRPF39Q86UA1 MIR8485-201ENST00000401372 91 ntBASIC-1.26□□□□□ -2.61
PRPF39Q86UA1 RNU6-402P-201ENST00000410678 103 ntBASIC-1.26□□□□□ -2.61
PRPF39Q86UA1 AL353691.2-201ENST00000443795 59 ntBASIC-1.26□□□□□ -2.61
PRPF39Q86UA1 AC093729.1-201ENST00000513074 128 ntBASIC-1.26□□□□□ -2.61
PRPF39Q86UA1 SNORD115-37-201ENST00000363768 82 ntBASIC-1.27□□□□□ -2.61
PRPF39Q86UA1 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.27□□□□□ -2.61
PRPF39Q86UA1 RNU6-982P-201ENST00000516216 102 ntBASIC-1.27□□□□□ -2.61
PRPF39Q86UA1 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.27□□□□□ -2.61
PRPF39Q86UA1 RNU6-158P-201ENST00000517104 100 ntBASIC-1.27□□□□□ -2.61
PRPF39Q86UA1 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.28□□□□□ -2.61
PRPF39Q86UA1 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.28□□□□□ -2.61
PRPF39Q86UA1 RPL35AP4-201ENST00000412007 102 ntBASIC-1.28□□□□□ -2.61
PRPF39Q86UA1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.28□□□□□ -2.61
PRPF39Q86UA1 RNU6-479P-201ENST00000516348 105 ntBASIC-1.28□□□□□ -2.61
PRPF39Q86UA1 RNU6-22P-201ENST00000384355 107 ntBASIC-1.29□□□□□ -2.62
PRPF39Q86UA1 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.29□□□□□ -2.62
PRPF39Q86UA1 RNU4-61P-201ENST00000411243 107 ntBASIC-1.29□□□□□ -2.62
PRPF39Q86UA1 AL031737.1-201ENST00000450125 223 ntBASIC-1.29□□□□□ -2.62
PRPF39Q86UA1 RNU6-807P-201ENST00000516805 107 ntBASIC-1.29□□□□□ -2.62
PRPF39Q86UA1 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.29□□□□□ -2.62
PRPF39Q86UA1 MIR548BB-201ENST00000626714 66 ntBASIC-1.29□□□□□ -2.62
PRPF39Q86UA1 RNU6-478P-201ENST00000363904 110 ntBASIC-1.3□□□□□ -2.62
PRPF39Q86UA1 RNU6-497P-201ENST00000365316 104 ntBASIC-1.3□□□□□ -2.62
PRPF39Q86UA1 MIR29B1-201ENST00000385015 81 ntBASIC-1.3□□□□□ -2.62
PRPF39Q86UA1 RNU6-604P-201ENST00000390917 100 ntBASIC-1.3□□□□□ -2.62
PRPF39Q86UA1 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.3□□□□□ -2.62
PRPF39Q86UA1 AP001318.4-201ENST00000616637 121 ntBASIC-1.3□□□□□ -2.62
PRPF39Q86UA1 MALAT1.1-201ENST00000618249 95 ntBASIC-1.3□□□□□ -2.62
PRPF39Q86UA1 SNORA8.1-201ENST00000384250 140 ntBASIC-1.31□□□□□ -2.62
PRPF39Q86UA1 MIR587-201ENST00000384845 96 ntBASIC-1.31□□□□□ -2.62
PRPF39Q86UA1 RNU7-174P-201ENST00000516248 59 ntBASIC-1.31□□□□□ -2.62
PRPF39Q86UA1 MIR3675-201ENST00000583661 73 ntBASIC-1.31□□□□□ -2.62
PRPF39Q86UA1 MIR5683-201ENST00000636514 76 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 386.1 ms