Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RNU6-636P-201ENST00000384598 107 ntBASIC-3.64□□□□□ -2.99
CDC42BPAQ5VT25 MIR363-201ENST00000384840 75 ntBASIC-3.64□□□□□ -2.99
CDC42BPAQ5VT25 SNORD116.2-201ENST00000391251 93 ntBASIC-3.64□□□□□ -2.99
CDC42BPAQ5VT25 MIR3121-201ENST00000579680 77 ntBASIC-3.64□□□□□ -2.99
CDC42BPAQ5VT25 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.64□□□□□ -2.99
CDC42BPAQ5VT25 SNORD113.1-201ENST00000363280 73 ntBASIC-3.65□□□□□ -2.99
CDC42BPAQ5VT25 RNU6-770P-201ENST00000363929 105 ntBASIC-3.65□□□□□ -2.99
CDC42BPAQ5VT25 SNORD115-46-201ENST00000390982 71 ntBASIC-3.65□□□□□ -2.99
CDC42BPAQ5VT25 RNU6-1153P-201ENST00000516760 105 ntBASIC-3.65□□□□□ -2.99
CDC42BPAQ5VT25 MIR6844-201ENST00000637122 62 ntBASIC-3.65□□□□□ -2.99
CDC42BPAQ5VT25 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.66□□□□□ -3
CDC42BPAQ5VT25 Y_RNA.560-201ENST00000384689 102 ntBASIC-3.66□□□□□ -3
CDC42BPAQ5VT25 SNORD116-6-201ENST00000384711 96 ntBASIC-3.66□□□□□ -3
CDC42BPAQ5VT25 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-3.66□□□□□ -3
CDC42BPAQ5VT25 U6.104-201ENST00000637979 90 ntBASIC-3.66□□□□□ -3
CDC42BPAQ5VT25 RNU6-422P-201ENST00000384632 107 ntBASIC-3.67□□□□□ -3
CDC42BPAQ5VT25 MIR1263-201ENST00000408324 86 ntBASIC-3.67□□□□□ -3
CDC42BPAQ5VT25 Y_RNA.646-201ENST00000410980 101 ntBASIC-3.67□□□□□ -3
CDC42BPAQ5VT25 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.67□□□□□ -3
CDC42BPAQ5VT25 Y_RNA.359-201ENST00000365498 102 ntBASIC-3.67□□□□□ -3
CDC42BPAQ5VT25 SNORA40B-201ENST00000385573 128 ntBASIC-3.67□□□□□ -3
CDC42BPAQ5VT25 MIR4777-201ENST00000583710 86 ntBASIC-3.67□□□□□ -3
CDC42BPAQ5VT25 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-3.68□□□□□ -3
CDC42BPAQ5VT25 RNU6-788P-201ENST00000390967 104 ntBASIC-3.68□□□□□ -3
CDC42BPAQ5VT25 MIR548P-201ENST00000408336 84 ntBASIC-3.68□□□□□ -3
CDC42BPAQ5VT25 AL603755.1-201ENST00000619504 163 ntBASIC-3.68□□□□□ -3
CDC42BPAQ5VT25 RNU6-836P-201ENST00000362920 107 ntBASIC-3.69□□□□□ -3
CDC42BPAQ5VT25 Y_RNA.275-201ENST00000364726 110 ntBASIC-3.69□□□□□ -3
CDC42BPAQ5VT25 RNU6-290P-201ENST00000365212 101 ntBASIC-3.69□□□□□ -3
CDC42BPAQ5VT25 MIR3149-201ENST00000584629 83 ntBASIC-3.69□□□□□ -3
CDC42BPAQ5VT25 Y_RNA.309-201ENST00000365046 111 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 Y_RNA.581-201ENST00000391017 97 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 SNORA75.5-201ENST00000391291 81 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 SEPT14P3-201ENST00000439401 183 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 AC099799.1-201ENST00000439809 192 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 AL732372.2-207ENST00000445840 183 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 SEPT14P2-201ENST00000453405 183 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 MTND2P14-201ENST00000482139 351 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 RNU6-789P-201ENST00000517105 102 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 FO082796.1-201ENST00000523795 183 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 AL160413.1-201ENST00000622780 310 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 RNU4-40P-201ENST00000364351 143 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 RNU6-639P-201ENST00000384074 107 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 SNORD2.1-201ENST00000458762 69 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 Z99129.1-201ENST00000612510 255 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 MIR8053-201ENST00000613344 75 ntBASIC-3.7□□□□□ -3
CDC42BPAQ5VT25 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.71□□□□□ -3
CDC42BPAQ5VT25 SNORA8.1-201ENST00000384250 140 ntBASIC-3.71□□□□□ -3
CDC42BPAQ5VT25 AP001318.4-201ENST00000616637 121 ntBASIC-3.71□□□□□ -3
CDC42BPAQ5VT25 AC090574.1-201ENST00000623186 233 ntBASIC-3.71□□□□□ -3
CDC42BPAQ5VT25 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.72□□□□□ -3
CDC42BPAQ5VT25 RNA5SP449-201ENST00000516871 130 ntBASIC-3.72□□□□□ -3
CDC42BPAQ5VT25 RNU6-624P-201ENST00000363411 107 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 Y_RNA.445-201ENST00000384168 102 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-972P-201ENST00000391208 107 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-373P-201ENST00000411247 98 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-537P-201ENST00000517277 103 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 MIR4272-201ENST00000635924 64 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 SNORD115.2-201ENST00000391126 59 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-303P-201ENST00000517091 106 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-231P-201ENST00000517122 103 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 NBR2-204ENST00000587322 63 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-3.73□□□□□ -3.01
CDC42BPAQ5VT25 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.74□□□□□ -3.01
CDC42BPAQ5VT25 RNU4-85P-201ENST00000364675 123 ntBASIC-3.74□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-1257P-201ENST00000384625 110 ntBASIC-3.74□□□□□ -3.01
CDC42BPAQ5VT25 AC040904.1-201ENST00000590850 223 ntBASIC-3.74□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-1085P-201ENST00000363576 107 ntBASIC-3.75□□□□□ -3.01
CDC42BPAQ5VT25 Y_RNA.339-201ENST00000365325 102 ntBASIC-3.75□□□□□ -3.01
CDC42BPAQ5VT25 RNY3P10-201ENST00000384764 102 ntBASIC-3.75□□□□□ -3.01
CDC42BPAQ5VT25 MIR4528-201ENST00000577763 90 ntBASIC-3.75□□□□□ -3.01
CDC42BPAQ5VT25 AL162413.1-201ENST00000603198 110 ntBASIC-3.75□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-92P-201ENST00000605893 104 ntBASIC-3.75□□□□□ -3.01
CDC42BPAQ5VT25 SNORD113-6-201ENST00000363345 75 ntBASIC-3.75□□□□□ -3.01
CDC42BPAQ5VT25 SNORA40.14-201ENST00000516543 86 ntBASIC-3.75□□□□□ -3.01
CDC42BPAQ5VT25 MIR4317-201ENST00000637586 65 ntBASIC-3.75□□□□□ -3.01
CDC42BPAQ5VT25 MIR548F5-201ENST00000408421 86 ntBASIC-3.76□□□□□ -3.01
CDC42BPAQ5VT25 Y_RNA.705-201ENST00000516862 110 ntBASIC-3.76□□□□□ -3.01
CDC42BPAQ5VT25 Y_RNA.262-201ENST00000364641 102 ntBASIC-3.77□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-196P-201ENST00000384315 107 ntBASIC-3.77□□□□□ -3.01
CDC42BPAQ5VT25 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.77□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-887P-201ENST00000410660 100 ntBASIC-3.77□□□□□ -3.01
CDC42BPAQ5VT25 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.77□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-795P-201ENST00000516323 103 ntBASIC-3.77□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-1314P-201ENST00000517139 104 ntBASIC-3.77□□□□□ -3.01
CDC42BPAQ5VT25 AC074348.1-201ENST00000426503 132 ntBASIC-3.78□□□□□ -3.01
CDC42BPAQ5VT25 RNU6-699P-201ENST00000517081 110 ntBASIC-3.78□□□□□ -3.01
CDC42BPAQ5VT25 AP003461.1-201ENST00000528866 78 ntBASIC-3.78□□□□□ -3.01
CDC42BPAQ5VT25 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-3.78□□□□□ -3.01
CDC42BPAQ5VT25 Y_RNA.202-201ENST00000364083 110 ntBASIC-3.78□□□□□ -3.02
CDC42BPAQ5VT25 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.78□□□□□ -3.02
CDC42BPAQ5VT25 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.78□□□□□ -3.02
CDC42BPAQ5VT25 RNU6-402P-201ENST00000410678 103 ntBASIC-3.78□□□□□ -3.02
CDC42BPAQ5VT25 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-3.78□□□□□ -3.02
CDC42BPAQ5VT25 SNORD60.1-201ENST00000362451 73 ntBASIC-3.79□□□□□ -3.02
CDC42BPAQ5VT25 RNU6-1219P-201ENST00000516143 112 ntBASIC-3.79□□□□□ -3.02
CDC42BPAQ5VT25 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-3.79□□□□□ -3.02
CDC42BPAQ5VT25 Z69908.1-201ENST00000622603 247 ntBASIC-3.79□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms