Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RNU6-574P-201ENST00000384265 107 ntBASIC-1.66□□□□□ -2.68
ZNF404Q494X3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.66□□□□□ -2.68
ZNF404Q494X3 RNU6-904P-201ENST00000516206 101 ntBASIC-1.66□□□□□ -2.68
ZNF404Q494X3 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.66□□□□□ -2.68
ZNF404Q494X3 RNU6-158P-201ENST00000517104 100 ntBASIC-1.66□□□□□ -2.68
ZNF404Q494X3 MIR548AG1-201ENST00000579932 66 ntBASIC-1.66□□□□□ -2.68
ZNF404Q494X3 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.67□□□□□ -2.68
ZNF404Q494X3 RNU6-340P-201ENST00000364005 107 ntBASIC-1.67□□□□□ -2.68
ZNF404Q494X3 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.67□□□□□ -2.68
ZNF404Q494X3 AL078595.1-201ENST00000404458 226 ntBASIC-1.67□□□□□ -2.68
ZNF404Q494X3 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.67□□□□□ -2.68
ZNF404Q494X3 AL450471.1-201ENST00000447509 127 ntBASIC-1.67□□□□□ -2.68
ZNF404Q494X3 RNU7-88P-201ENST00000458752 63 ntBASIC-1.67□□□□□ -2.68
ZNF404Q494X3 SNORD33.1-201ENST00000516213 88 ntBASIC-1.67□□□□□ -2.68
ZNF404Q494X3 AL353621.2-201ENST00000605340 133 ntBASIC-1.67□□□□□ -2.68
ZNF404Q494X3 MIR6874-201ENST00000635894 71 ntBASIC-1.67□□□□□ -2.68
ZNF404Q494X3 RNU6-681P-201ENST00000364012 104 ntBASIC-1.68□□□□□ -2.68
ZNF404Q494X3 MIR601-201ENST00000385256 79 ntBASIC-1.68□□□□□ -2.68
ZNF404Q494X3 RNU6-257P-201ENST00000410238 98 ntBASIC-1.68□□□□□ -2.68
ZNF404Q494X3 RNU6-412P-201ENST00000516434 106 ntBASIC-1.68□□□□□ -2.68
ZNF404Q494X3 RNU6-656P-201ENST00000516785 107 ntBASIC-1.68□□□□□ -2.68
ZNF404Q494X3 RNU6-807P-201ENST00000516805 107 ntBASIC-1.68□□□□□ -2.68
ZNF404Q494X3 RNU6-537P-201ENST00000517277 103 ntBASIC-1.68□□□□□ -2.68
ZNF404Q494X3 U2.7-201ENST00000619197 100 ntBASIC-1.68□□□□□ -2.68
ZNF404Q494X3 U6.95-201ENST00000636931 70 ntBASIC-1.68□□□□□ -2.68
ZNF404Q494X3 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.69□□□□□ -2.68
ZNF404Q494X3 MIR548A3-201ENST00000385297 97 ntBASIC-1.69□□□□□ -2.68
ZNF404Q494X3 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.69□□□□□ -2.68
ZNF404Q494X3 RNU6-463P-201ENST00000384340 107 ntBASIC-1.7□□□□□ -2.68
ZNF404Q494X3 MIR1468-201ENST00000410600 86 ntBASIC-1.7□□□□□ -2.68
ZNF404Q494X3 RNU6-388P-201ENST00000517012 105 ntBASIC-1.7□□□□□ -2.68
ZNF404Q494X3 RNU6-389P-201ENST00000517048 105 ntBASIC-1.7□□□□□ -2.68
ZNF404Q494X3 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.7□□□□□ -2.68
ZNF404Q494X3 AL035461.1-201ENST00000421490 332 ntBASIC-1.71□□□□□ -2.68
ZNF404Q494X3 AC090616.4-201ENST00000448026 115 ntBASIC-1.71□□□□□ -2.68
ZNF404Q494X3 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.72□□□□□ -2.68
ZNF404Q494X3 RNA5SP86-201ENST00000390869 98 ntBASIC-1.72□□□□□ -2.68
ZNF404Q494X3 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.73□□□□□ -2.69
ZNF404Q494X3 RNU6-168P-201ENST00000516189 101 ntBASIC-1.73□□□□□ -2.69
ZNF404Q494X3 RNU7-153P-201ENST00000516455 62 ntBASIC-1.73□□□□□ -2.69
ZNF404Q494X3 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.74□□□□□ -2.69
ZNF404Q494X3 RNU6-886P-201ENST00000384319 105 ntBASIC-1.74□□□□□ -2.69
ZNF404Q494X3 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.74□□□□□ -2.69
ZNF404Q494X3 MT-TG-201ENST00000387429 68 ntBASIC-1.74□□□□□ -2.69
ZNF404Q494X3 RPL35AP4-201ENST00000412007 102 ntBASIC-1.74□□□□□ -2.69
ZNF404Q494X3 RNU6-182P-201ENST00000516970 105 ntBASIC-1.74□□□□□ -2.69
ZNF404Q494X3 RNU6-880P-201ENST00000384526 107 ntBASIC-1.75□□□□□ -2.69
ZNF404Q494X3 RNU6-540P-201ENST00000384622 101 ntBASIC-1.75□□□□□ -2.69
ZNF404Q494X3 SNORD77.2-201ENST00000391045 68 ntBASIC-1.75□□□□□ -2.69
ZNF404Q494X3 RNU7-200P-201ENST00000516105 62 ntBASIC-1.75□□□□□ -2.69
ZNF404Q494X3 RNU6-971P-201ENST00000516920 106 ntBASIC-1.75□□□□□ -2.69
ZNF404Q494X3 MIR365A-201ENST00000362260 87 ntBASIC-1.76□□□□□ -2.69
ZNF404Q494X3 RNU6-478P-201ENST00000363904 110 ntBASIC-1.76□□□□□ -2.69
ZNF404Q494X3 MIR548H1-201ENST00000408610 102 ntBASIC-1.76□□□□□ -2.69
ZNF404Q494X3 RNU7-61P-201ENST00000515897 61 ntBASIC-1.76□□□□□ -2.69
ZNF404Q494X3 RNU6-659P-201ENST00000516454 104 ntBASIC-1.76□□□□□ -2.69
ZNF404Q494X3 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.77□□□□□ -2.69
ZNF404Q494X3 MIR548Q-201ENST00000408404 100 ntBASIC-1.77□□□□□ -2.69
ZNF404Q494X3 MIR4441-201ENST00000582623 100 ntBASIC-1.77□□□□□ -2.69
ZNF404Q494X3 RNU6-645P-201ENST00000364649 106 ntBASIC-1.78□□□□□ -2.69
ZNF404Q494X3 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.78□□□□□ -2.69
ZNF404Q494X3 RNU6-400P-201ENST00000391173 106 ntBASIC-1.78□□□□□ -2.69
ZNF404Q494X3 AC018880.2-201ENST00000414265 201 ntBASIC-1.78□□□□□ -2.69
ZNF404Q494X3 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.78□□□□□ -2.69
ZNF404Q494X3 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.79□□□□□ -2.7
ZNF404Q494X3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.79□□□□□ -2.7
ZNF404Q494X3 RNU6-704P-201ENST00000364162 103 ntBASIC-1.8□□□□□ -2.7
ZNF404Q494X3 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.8□□□□□ -2.7
ZNF404Q494X3 RNU6-458P-201ENST00000384179 107 ntBASIC-1.8□□□□□ -2.7
ZNF404Q494X3 RNU6-696P-201ENST00000390834 107 ntBASIC-1.8□□□□□ -2.7
ZNF404Q494X3 U6.58-201ENST00000613107 107 ntBASIC-1.8□□□□□ -2.7
ZNF404Q494X3 RNU6-79P-201ENST00000362511 107 ntBASIC-1.81□□□□□ -2.7
ZNF404Q494X3 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.81□□□□□ -2.7
ZNF404Q494X3 SNORD18.1-201ENST00000363807 70 ntBASIC-1.81□□□□□ -2.7
ZNF404Q494X3 RNU6-694P-201ENST00000364071 147 ntBASIC-1.81□□□□□ -2.7
ZNF404Q494X3 SNORD115-27-201ENST00000364430 82 ntBASIC-1.81□□□□□ -2.7
ZNF404Q494X3 SNORD116-21-201ENST00000384507 92 ntBASIC-1.81□□□□□ -2.7
ZNF404Q494X3 MIR590-201ENST00000385008 97 ntBASIC-1.81□□□□□ -2.7
ZNF404Q494X3 MIR519C-201ENST00000385053 87 ntBASIC-1.81□□□□□ -2.7
ZNF404Q494X3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
ZNF404Q494X3 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.81□□□□□ -2.7
ZNF404Q494X3 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.81□□□□□ -2.7
ZNF404Q494X3 U7.3-201ENST00000616123 62 ntBASIC-1.81□□□□□ -2.7
ZNF404Q494X3 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.82□□□□□ -2.7
ZNF404Q494X3 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.82□□□□□ -2.7
ZNF404Q494X3 RNU7-174P-201ENST00000516248 59 ntBASIC-1.82□□□□□ -2.7
ZNF404Q494X3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.82□□□□□ -2.7
ZNF404Q494X3 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.83□□□□□ -2.7
ZNF404Q494X3 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.83□□□□□ -2.7
ZNF404Q494X3 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.83□□□□□ -2.7
ZNF404Q494X3 MIR548C-201ENST00000384815 97 ntBASIC-1.83□□□□□ -2.7
ZNF404Q494X3 MIR1302-5-201ENST00000408164 150 ntBASIC-1.83□□□□□ -2.7
ZNF404Q494X3 RNU6-983P-201ENST00000516004 103 ntBASIC-1.83□□□□□ -2.7
ZNF404Q494X3 RNU6-162P-201ENST00000516228 103 ntBASIC-1.83□□□□□ -2.7
ZNF404Q494X3 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.84□□□□□ -2.7
ZNF404Q494X3 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.84□□□□□ -2.7
ZNF404Q494X3 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.84□□□□□ -2.7
ZNF404Q494X3 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.84□□□□□ -2.7
ZNF404Q494X3 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.84□□□□□ -2.7
ZNF404Q494X3 MIR429-201ENST00000362106 83 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms