Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-162P-201ENST00000516228 103 ntBASIC-1.38□□□□□ -2.63
SCN1BQ07699 RNU6-158P-201ENST00000517104 100 ntBASIC-1.38□□□□□ -2.63
SCN1BQ07699 U6.81-201ENST00000612550 106 ntBASIC-1.38□□□□□ -2.63
SCN1BQ07699 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.38□□□□□ -2.63
SCN1BQ07699 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.39□□□□□ -2.63
SCN1BQ07699 RNU6-554P-201ENST00000410466 106 ntBASIC-1.39□□□□□ -2.63
SCN1BQ07699 MIR4723-201ENST00000585070 81 ntBASIC-1.39□□□□□ -2.63
SCN1BQ07699 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.4□□□□□ -2.63
SCN1BQ07699 RNU6-959P-201ENST00000384671 107 ntBASIC-1.4□□□□□ -2.63
SCN1BQ07699 AC008267.6-201ENST00000441664 139 ntBASIC-1.4□□□□□ -2.63
SCN1BQ07699 RNU6-109P-201ENST00000516364 107 ntBASIC-1.4□□□□□ -2.63
SCN1BQ07699 RNU6-184P-201ENST00000516514 107 ntBASIC-1.4□□□□□ -2.63
SCN1BQ07699 U7.3-201ENST00000616123 62 ntBASIC-1.4□□□□□ -2.63
SCN1BQ07699 RNU6-746P-201ENST00000384112 109 ntBASIC-1.41□□□□□ -2.64
SCN1BQ07699 MIR3668-201ENST00000582138 75 ntBASIC-1.41□□□□□ -2.64
SCN1BQ07699 SNORA19-201ENST00000384737 128 ntBASIC-1.42□□□□□ -2.64
SCN1BQ07699 MIR1255B2-201ENST00000408618 67 ntBASIC-1.42□□□□□ -2.64
SCN1BQ07699 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.42□□□□□ -2.64
SCN1BQ07699 RNU6-706P-201ENST00000517229 104 ntBASIC-1.42□□□□□ -2.64
SCN1BQ07699 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.42□□□□□ -2.64
SCN1BQ07699 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.43□□□□□ -2.64
SCN1BQ07699 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.43□□□□□ -2.64
SCN1BQ07699 SNORD114-3-201ENST00000364969 75 ntBASIC-1.43□□□□□ -2.64
SCN1BQ07699 RNU6-106P-201ENST00000384405 107 ntBASIC-1.43□□□□□ -2.64
SCN1BQ07699 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.44□□□□□ -2.64
SCN1BQ07699 MIR3671-201ENST00000580455 88 ntBASIC-1.44□□□□□ -2.64
SCN1BQ07699 MIR4464-201ENST00000580818 92 ntBASIC-1.44□□□□□ -2.64
SCN1BQ07699 MIR6129-201ENST00000616087 109 ntBASIC-1.44□□□□□ -2.64
SCN1BQ07699 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.45□□□□□ -2.64
SCN1BQ07699 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.45□□□□□ -2.64
SCN1BQ07699 AL450471.1-201ENST00000447509 127 ntBASIC-1.45□□□□□ -2.64
SCN1BQ07699 RNU7-153P-201ENST00000516455 62 ntBASIC-1.45□□□□□ -2.64
SCN1BQ07699 AL365222.1-201ENST00000614661 98 ntBASIC-1.46□□□□□ -2.64
SCN1BQ07699 MIR1246-201ENST00000636535 73 ntBASIC-1.46□□□□□ -2.64
SCN1BQ07699 RNY4P27-201ENST00000363341 96 ntBASIC-1.47□□□□□ -2.64
SCN1BQ07699 SNORD114-17-201ENST00000364699 75 ntBASIC-1.47□□□□□ -2.64
SCN1BQ07699 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.47□□□□□ -2.64
SCN1BQ07699 CYP3A54P-201ENST00000566950 75 ntBASIC-1.47□□□□□ -2.64
SCN1BQ07699 AL445584.3-201ENST00000617173 78 ntBASIC-1.47□□□□□ -2.64
SCN1BQ07699 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.48□□□□□ -2.65
SCN1BQ07699 snoU83B.1-201ENST00000517136 88 ntBASIC-1.48□□□□□ -2.65
SCN1BQ07699 MIR6888-201ENST00000621977 67 ntBASIC-1.48□□□□□ -2.65
SCN1BQ07699 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.49□□□□□ -2.65
SCN1BQ07699 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.49□□□□□ -2.65
SCN1BQ07699 MIR521-2-201ENST00000384818 87 ntBASIC-1.5□□□□□ -2.65
SCN1BQ07699 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.5□□□□□ -2.65
SCN1BQ07699 RNU6-752P-201ENST00000516376 102 ntBASIC-1.5□□□□□ -2.65
SCN1BQ07699 SNORD115-27-201ENST00000364430 82 ntBASIC-1.51□□□□□ -2.65
SCN1BQ07699 AC138207.3-201ENST00000585289 166 ntBASIC-1.51□□□□□ -2.65
SCN1BQ07699 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.52□□□□□ -2.65
SCN1BQ07699 MIR1207-201ENST00000408249 87 ntBASIC-1.52□□□□□ -2.65
SCN1BQ07699 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.52□□□□□ -2.65
SCN1BQ07699 RNU6-766P-201ENST00000362478 107 ntBASIC-1.53□□□□□ -2.65
SCN1BQ07699 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.53□□□□□ -2.65
SCN1BQ07699 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.53□□□□□ -2.65
SCN1BQ07699 RNU6-479P-201ENST00000516348 105 ntBASIC-1.53□□□□□ -2.65
SCN1BQ07699 RNU6-226P-201ENST00000363778 107 ntBASIC-1.54□□□□□ -2.66
SCN1BQ07699 RNU6-81P-201ENST00000365608 104 ntBASIC-1.54□□□□□ -2.66
SCN1BQ07699 MIR519C-201ENST00000385053 87 ntBASIC-1.54□□□□□ -2.66
SCN1BQ07699 RNU6-589P-201ENST00000516485 107 ntBASIC-1.54□□□□□ -2.66
SCN1BQ07699 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.54□□□□□ -2.66
SCN1BQ07699 AC132825.6-201ENST00000638861 357 ntBASIC-1.54□□□□□ -2.66
SCN1BQ07699 RNU6-340P-201ENST00000364005 107 ntBASIC-1.55□□□□□ -2.66
SCN1BQ07699 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.55□□□□□ -2.66
SCN1BQ07699 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.55□□□□□ -2.66
SCN1BQ07699 HLA-S-202ENST00000425174 53 ntBASIC-1.55□□□□□ -2.66
SCN1BQ07699 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.56□□□□□ -2.66
SCN1BQ07699 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
SCN1BQ07699 MIR6739-201ENST00000622461 75 ntBASIC-1.56□□□□□ -2.66
SCN1BQ07699 RNU6-681P-201ENST00000364012 104 ntBASIC-1.57□□□□□ -2.66
SCN1BQ07699 SNORD77.2-201ENST00000391045 68 ntBASIC-1.57□□□□□ -2.66
SCN1BQ07699 RNU7-134P-201ENST00000458997 64 ntBASIC-1.57□□□□□ -2.66
SCN1BQ07699 MIR8485-201ENST00000401372 91 ntBASIC-1.58□□□□□ -2.66
SCN1BQ07699 MTATP8P2-201ENST00000435212 202 ntBASIC-1.58□□□□□ -2.66
SCN1BQ07699 RNU7-154P-201ENST00000516194 62 ntBASIC-1.58□□□□□ -2.66
SCN1BQ07699 RNU6-924P-201ENST00000362926 108 ntBASIC-1.59□□□□□ -2.66
SCN1BQ07699 RNU6-834P-201ENST00000362367 110 ntBASIC-1.6□□□□□ -2.67
SCN1BQ07699 SNORD115-37-201ENST00000363768 82 ntBASIC-1.6□□□□□ -2.67
SCN1BQ07699 MT-TR-201ENST00000387439 65 ntBASIC-1.6□□□□□ -2.67
SCN1BQ07699 RNU6-518P-201ENST00000516056 96 ntBASIC-1.6□□□□□ -2.67
SCN1BQ07699 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.6□□□□□ -2.67
SCN1BQ07699 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.6□□□□□ -2.67
SCN1BQ07699 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.61□□□□□ -2.67
SCN1BQ07699 AL035461.1-201ENST00000421490 332 ntBASIC-1.61□□□□□ -2.67
SCN1BQ07699 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.61□□□□□ -2.67
SCN1BQ07699 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.62□□□□□ -2.67
SCN1BQ07699 MIR519A2-201ENST00000384990 87 ntBASIC-1.62□□□□□ -2.67
SCN1BQ07699 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
SCN1BQ07699 RNU6-22P-201ENST00000384355 107 ntBASIC-1.63□□□□□ -2.67
SCN1BQ07699 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.63□□□□□ -2.67
SCN1BQ07699 MIR5591-201ENST00000578248 65 ntBASIC-1.63□□□□□ -2.67
SCN1BQ07699 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.64□□□□□ -2.67
SCN1BQ07699 AL031737.1-201ENST00000450125 223 ntBASIC-1.64□□□□□ -2.67
SCN1BQ07699 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.64□□□□□ -2.67
SCN1BQ07699 MIR4668-201ENST00000582284 70 ntBASIC-1.64□□□□□ -2.67
SCN1BQ07699 MIR2052-201ENST00000636055 55 ntBASIC-1.64□□□□□ -2.67
SCN1BQ07699 RNU6-633P-201ENST00000362612 103 ntBASIC-1.65□□□□□ -2.67
SCN1BQ07699 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.65□□□□□ -2.67
SCN1BQ07699 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.65□□□□□ -2.67
SCN1BQ07699 RNU6-540P-201ENST00000384622 101 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 219.2 ms