Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR548D2-201ENST00000384955 97 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 SNORA17.4-201ENST00000391287 132 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 MIR1302-6-201ENST00000408466 90 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 AC109635.3-201ENST00000529536 185 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 MIR4796-201ENST00000580742 81 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 Z99129.1-201ENST00000612510 255 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 SNORD77.2-201ENST00000391045 68 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 MIR3658-201ENST00000636291 56 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 SNORA41B-201ENST00000384785 128 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 RNU6-493P-201ENST00000391321 108 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR8053-201ENST00000613344 75 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR579-201ENST00000385221 98 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR1302-11-201ENST00000408051 138 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR548P-201ENST00000408336 84 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR1302-9-201ENST00000408365 138 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR1302-10-201ENST00000408734 138 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR1302-2-201ENST00000607096 138 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 RNU6-624P-201ENST00000363411 107 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 RNU6-956P-201ENST00000458868 103 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 RNU6-303P-201ENST00000517091 106 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 RNU6-974P-201ENST00000384099 108 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 RNU6-649P-201ENST00000384463 107 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 RNU6-554P-201ENST00000410466 106 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 RNU7-152P-201ENST00000458982 64 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 SNORD63.2-201ENST00000516303 64 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 RNU6-182P-201ENST00000516970 105 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 RNU6-176P-201ENST00000517196 105 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 U2.14-201ENST00000615943 113 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 SNORD45.2-201ENST00000363552 72 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 RNU6-828P-201ENST00000364876 107 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 RNU6-121P-201ENST00000410525 99 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 MIR3675-201ENST00000583661 73 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 MIR4777-201ENST00000583710 86 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
HSPG2P98160 SNORA40.4-201ENST00000390971 128 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 SNORD37.2-201ENST00000391075 66 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.23□□□□□ -2.61
HSPG2P98160 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 MIR3613-201ENST00000579844 87 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 AC103810.7-201ENST00000607821 91 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 MIR369-201ENST00000362155 70 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNY3P2-201ENST00000362918 102 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNY3P8-201ENST00000411366 126 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.24□□□□□ -2.61
HSPG2P98160 RNY4P14-201ENST00000363656 96 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNU6-537P-201ENST00000517277 103 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 AC090971.5-201ENST00000621102 293 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNU6-755P-201ENST00000364400 103 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 MTND2P23-201ENST00000422990 651 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 SCARNA23-201ENST00000516060 130 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNA5SP173-201ENST00000364857 136 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNU6-590P-201ENST00000365039 107 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNU6-639P-201ENST00000384074 107 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNY3P15-201ENST00000516297 97 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 MIR7110-201ENST00000612638 86 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 MIR7978-201ENST00000636158 59 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 MIR202-201ENST00000362219 110 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 MIR1263-201ENST00000408324 86 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 RNU6-822P-201ENST00000362707 106 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU6-823P-201ENST00000391042 103 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU4-14P-201ENST00000410858 122 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 MTND4P17-201ENST00000470444 350 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU6-686P-201ENST00000364839 107 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU6-300P-201ENST00000459080 104 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU7-153P-201ENST00000516455 62 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU6-557P-201ENST00000516842 110 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 MIR4282-201ENST00000583613 67 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 AC078883.4-201ENST00000623218 367 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU6-770P-201ENST00000363929 105 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 RNU6-68P-201ENST00000516576 104 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 MIR620-201ENST00000385232 95 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 U4.5-201ENST00000617137 123 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms