Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 RNU6-330P-201ENST00000363015 107 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 RNY4P14-201ENST00000363656 96 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 RNU6-806P-201ENST00000365147 105 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 MIR509-1-201ENST00000385265 94 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 MIR124-1-201ENST00000385275 85 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
ABCA4P78363 MIR509-2-201ENST00000390724 91 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 RNU6-972P-201ENST00000391208 107 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 SNORA40.14-201ENST00000516543 86 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 AC130289.1-201ENST00000577321 73 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 MIR5009-201ENST00000578736 100 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 U6.104-201ENST00000637979 90 ntBASIC-0.98□□□□□ -2.57
ABCA4P78363 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 MTND3P22-201ENST00000510932 243 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 RNU6-311P-201ENST00000516224 102 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 AC090582.1-201ENST00000636321 199 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 SNORD113.1-201ENST00000363280 73 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 SNORD45B-201ENST00000364617 72 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 SNORA8.1-201ENST00000384250 140 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 RNU6-800P-201ENST00000384473 103 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 RNU6-381P-201ENST00000391259 108 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 MTND1P29-201ENST00000448112 647 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 RNU6-971P-201ENST00000516920 106 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 MIR4744-201ENST00000581563 82 ntBASIC-0.99□□□□□ -2.57
ABCA4P78363 Y_RNA.9-201ENST00000362354 101 ntBASIC-1□□□□□ -2.57
ABCA4P78363 RNU6-590P-201ENST00000365039 107 ntBASIC-1□□□□□ -2.57
ABCA4P78363 RNU6-737P-201ENST00000365370 107 ntBASIC-1□□□□□ -2.57
ABCA4P78363 Y_RNA.202-201ENST00000364083 110 ntBASIC-1□□□□□ -2.57
ABCA4P78363 SNORD114-13-201ENST00000364377 74 ntBASIC-1□□□□□ -2.57
ABCA4P78363 Y_RNA.264-201ENST00000364665 102 ntBASIC-1□□□□□ -2.57
ABCA4P78363 Y_RNA.281-201ENST00000364774 94 ntBASIC-1□□□□□ -2.57
ABCA4P78363 SNORD58A-201ENST00000383875 65 ntBASIC-1□□□□□ -2.57
ABCA4P78363 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1□□□□□ -2.57
ABCA4P78363 SNORA40.4-201ENST00000390971 128 ntBASIC-1□□□□□ -2.57
ABCA4P78363 RNU6-1248P-201ENST00000391096 64 ntBASIC-1□□□□□ -2.57
ABCA4P78363 RNU6-904P-201ENST00000516206 101 ntBASIC-1□□□□□ -2.57
ABCA4P78363 Y_RNA.718-201ENST00000517110 102 ntBASIC-1□□□□□ -2.57
ABCA4P78363 U7.2-201ENST00000607576 63 ntBASIC-1□□□□□ -2.57
ABCA4P78363 SNORD18B-201ENST00000365659 72 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
ABCA4P78363 DEFB108C-201ENST00000400154 252 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 AL731768.1-201ENST00000603124 139 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 RNU6-598P-201ENST00000364017 105 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 RNU7-197P-201ENST00000458836 62 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 RNU4-71P-201ENST00000516258 113 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 AC104996.3-201ENST00000590718 94 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 AC119751.7-201ENST00000600494 245 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 MIR548AH-201ENST00000637109 76 ntBASIC-1.01□□□□□ -2.57
ABCA4P78363 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.02□□□□□ -2.57
ABCA4P78363 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.02□□□□□ -2.57
ABCA4P78363 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-1.02□□□□□ -2.57
ABCA4P78363 RNU6-307P-201ENST00000516743 106 ntBASIC-1.02□□□□□ -2.57
ABCA4P78363 SNORA81.3-201ENST00000517283 198 ntBASIC-1.02□□□□□ -2.57
ABCA4P78363 AL603755.1-201ENST00000619504 163 ntBASIC-1.02□□□□□ -2.57
ABCA4P78363 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 RNY4P10-201ENST00000365571 96 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 SNORA40B-201ENST00000385573 128 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 SNORA7.5-201ENST00000410672 110 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 RNU6-772P-201ENST00000516042 105 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 RNU6-264P-201ENST00000517134 104 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 MIR3675-201ENST00000583661 73 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 RNA5SP173-201ENST00000364857 136 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 MIR559-201ENST00000385188 96 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 RNU6-129P-201ENST00000391022 107 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 RNU4-14P-201ENST00000410858 122 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.03□□□□□ -2.57
ABCA4P78363 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.03□□□□□ -2.57
ABCA4P78363 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.04□□□□□ -2.58
ABCA4P78363 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.04□□□□□ -2.58
ABCA4P78363 RNU6-918P-201ENST00000391219 106 ntBASIC-1.04□□□□□ -2.58
ABCA4P78363 AC074348.1-201ENST00000426503 132 ntBASIC-1.04□□□□□ -2.58
ABCA4P78363 RNU6-92P-201ENST00000605893 104 ntBASIC-1.04□□□□□ -2.58
ABCA4P78363 MIR6844-201ENST00000637122 62 ntBASIC-1.04□□□□□ -2.58
ABCA4P78363 MIR429-201ENST00000362106 83 ntBASIC-1.04□□□□□ -2.58
ABCA4P78363 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 415.6 ms