Protein–RNA interactions for Protein: P48436

SOX9, Transcription factor SOX-9, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9P48436 RNA5SP98-201ENST00000363158 137 ntBASIC0.16□□□□□ -2.38
SOX9P48436 MIR145-201ENST00000384967 88 ntBASIC0.16□□□□□ -2.38
SOX9P48436 RNU7-159P-201ENST00000459284 62 ntBASIC0.16□□□□□ -2.38
SOX9P48436 CR383656.4-201ENST00000546909 122 ntBASIC0.16□□□□□ -2.38
SOX9P48436 MIR8053-201ENST00000613344 75 ntBASIC0.16□□□□□ -2.38
SOX9P48436 SNORD114-9-201ENST00000364370 72 ntBASIC0.15□□□□□ -2.39
SOX9P48436 MIR106A-201ENST00000384870 81 ntBASIC0.15□□□□□ -2.39
SOX9P48436 SNORD114-5-201ENST00000362928 70 ntBASIC0.14□□□□□ -2.39
SOX9P48436 RNU6-604P-201ENST00000390917 100 ntBASIC0.14□□□□□ -2.39
SOX9P48436 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
SOX9P48436 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
SOX9P48436 MIR4662A-201ENST00000637499 67 ntBASIC0.14□□□□□ -2.39
SOX9P48436 Y_RNA.185-201ENST00000363894 100 ntBASIC0.13□□□□□ -2.39
SOX9P48436 Y_RNA.244-201ENST00000364484 109 ntBASIC0.13□□□□□ -2.39
SOX9P48436 RNU6-411P-201ENST00000384451 107 ntBASIC0.13□□□□□ -2.39
SOX9P48436 MIR154-201ENST00000385243 84 ntBASIC0.13□□□□□ -2.39
SOX9P48436 snoU13.19-201ENST00000459148 104 ntBASIC0.13□□□□□ -2.39
SOX9P48436 U6.96-201ENST00000636425 70 ntBASIC0.13□□□□□ -2.39
SOX9P48436 MIR148A-201ENST00000362215 68 ntBASIC0.12□□□□□ -2.39
SOX9P48436 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.12□□□□□ -2.39
SOX9P48436 MIR664A-201ENST00000626086 82 ntBASIC0.12□□□□□ -2.39
SOX9P48436 MIR548H2-201ENST00000408874 88 ntBASIC0.11□□□□□ -2.39
SOX9P48436 RNU6-180P-201ENST00000516697 61 ntBASIC0.11□□□□□ -2.39
SOX9P48436 SNORA40.17-201ENST00000517256 115 ntBASIC0.11□□□□□ -2.39
SOX9P48436 MIR3134-201ENST00000579433 74 ntBASIC0.11□□□□□ -2.39
SOX9P48436 Y_RNA.788-201ENST00000622394 112 ntBASIC0.11□□□□□ -2.39
SOX9P48436 MIR371B-201ENST00000638082 66 ntBASIC0.11□□□□□ -2.39
SOX9P48436 SNORD115-25-201ENST00000362619 82 ntBASIC0.1□□□□□ -2.39
SOX9P48436 RNU6-587P-201ENST00000391282 106 ntBASIC0.1□□□□□ -2.39
SOX9P48436 AP000676.1-201ENST00000533307 52 ntBASIC0.1□□□□□ -2.39
SOX9P48436 MIR6739-201ENST00000622461 75 ntBASIC0.1□□□□□ -2.39
SOX9P48436 RNU6-1241P-201ENST00000384536 107 ntBASIC0.09□□□□□ -2.4
SOX9P48436 MIR521-2-201ENST00000384818 87 ntBASIC0.09□□□□□ -2.4
SOX9P48436 Z95118.1-201ENST00000421372 247 ntBASIC0.09□□□□□ -2.4
SOX9P48436 RNU7-165P-201ENST00000458864 60 ntBASIC0.08□□□□□ -2.4
SOX9P48436 Y_RNA.633-201ENST00000459107 95 ntBASIC0.08□□□□□ -2.4
SOX9P48436 RNU6-638P-201ENST00000516582 104 ntBASIC0.07□□□□□ -2.4
SOX9P48436 RNU6-895P-201ENST00000384125 103 ntBASIC0.06□□□□□ -2.4
SOX9P48436 SNORA49-201ENST00000386157 136 ntBASIC0.06□□□□□ -2.4
SOX9P48436 RNA5SP25-201ENST00000410815 110 ntBASIC0.06□□□□□ -2.4
SOX9P48436 RNU6-645P-201ENST00000364649 106 ntBASIC0.05□□□□□ -2.4
SOX9P48436 SNORA33.1-201ENST00000364957 130 ntBASIC0.05□□□□□ -2.4
SOX9P48436 RNU6-30P-201ENST00000384561 107 ntBASIC0.05□□□□□ -2.4
SOX9P48436 Y_RNA.545-201ENST00000384652 105 ntBASIC0.05□□□□□ -2.4
SOX9P48436 MIR889-201ENST00000401280 79 ntBASIC0.05□□□□□ -2.4
SOX9P48436 MTND4LP1-201ENST00000446263 157 ntBASIC0.05□□□□□ -2.4
SOX9P48436 IGLVI-20-201ENST00000519296 130 ntBASIC0.05□□□□□ -2.4
SOX9P48436 MIR4667-201ENST00000578933 66 ntBASIC0.05□□□□□ -2.4
SOX9P48436 RNU6-758P-201ENST00000516292 89 ntBASIC0.04□□□□□ -2.4
SOX9P48436 SNORD114-31-201ENST00000363219 75 ntBASIC0.03□□□□□ -2.4
SOX9P48436 RNU6-776P-201ENST00000364403 104 ntBASIC0.03□□□□□ -2.4
SOX9P48436 SNORD115-22-201ENST00000364456 82 ntBASIC0.03□□□□□ -2.4
SOX9P48436 RNU6-1022P-201ENST00000365049 104 ntBASIC0.03□□□□□ -2.4
SOX9P48436 SNORD45A-201ENST00000384512 84 ntBASIC0.02□□□□□ -2.41
SOX9P48436 AC104692.1-201ENST00000472406 90 ntBASIC0.02□□□□□ -2.41
SOX9P48436 RNU6-881P-201ENST00000516813 102 ntBASIC0.02□□□□□ -2.41
SOX9P48436 MIR6773-201ENST00000612812 74 ntBASIC0.02□□□□□ -2.41
SOX9P48436 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
SOX9P48436 RNU6-871P-201ENST00000516122 100 ntBASIC0.01□□□□□ -2.41
SOX9P48436 SNORD113.1-201ENST00000363280 73 ntBASIC0□□□□□ -2.41
SOX9P48436 RNA5SP368-201ENST00000364298 116 ntBASIC0□□□□□ -2.41
SOX9P48436 RNU6-929P-201ENST00000384429 107 ntBASIC0□□□□□ -2.41
SOX9P48436 RNU6-687P-201ENST00000516443 89 ntBASIC0□□□□□ -2.41
SOX9P48436 RNU6-46P-201ENST00000383860 107 ntBASIC-0.01□□□□□ -2.41
SOX9P48436 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.01□□□□□ -2.41
SOX9P48436 RNU6-982P-201ENST00000516216 102 ntBASIC-0.01□□□□□ -2.41
SOX9P48436 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.01□□□□□ -2.41
SOX9P48436 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
SOX9P48436 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.01□□□□□ -2.41
SOX9P48436 SNORD114-15-201ENST00000364687 72 ntBASIC-0.02□□□□□ -2.41
SOX9P48436 RNU6-302P-201ENST00000365249 107 ntBASIC-0.02□□□□□ -2.41
SOX9P48436 MIR548C-201ENST00000384815 97 ntBASIC-0.02□□□□□ -2.41
SOX9P48436 RNU6-656P-201ENST00000516785 107 ntBASIC-0.02□□□□□ -2.41
SOX9P48436 MIR4493-201ENST00000584016 73 ntBASIC-0.02□□□□□ -2.41
SOX9P48436 AP001180.6-201ENST00000584918 159 ntBASIC-0.02□□□□□ -2.41
SOX9P48436 RNU6-502P-201ENST00000362419 108 ntBASIC-0.03□□□□□ -2.41
SOX9P48436 RNU6-668P-201ENST00000364180 107 ntBASIC-0.03□□□□□ -2.41
SOX9P48436 RNU6-455P-201ENST00000384681 107 ntBASIC-0.03□□□□□ -2.41
SOX9P48436 snoR1.1-201ENST00000628177 80 ntBASIC-0.03□□□□□ -2.41
SOX9P48436 MIR6507-201ENST00000613630 70 ntBASIC-0.04□□□□□ -2.42
SOX9P48436 MIR1295B-201ENST00000636144 60 ntBASIC-0.04□□□□□ -2.42
SOX9P48436 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.05□□□□□ -2.42
SOX9P48436 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
SOX9P48436 CYP3A54P-201ENST00000566950 75 ntBASIC-0.05□□□□□ -2.42
SOX9P48436 MIR604-201ENST00000384880 94 ntBASIC-0.06□□□□□ -2.42
SOX9P48436 MIRLET7B-201ENST00000385140 83 ntBASIC-0.07□□□□□ -2.42
SOX9P48436 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.07□□□□□ -2.42
SOX9P48436 RNU6-634P-201ENST00000459134 106 ntBASIC-0.07□□□□□ -2.42
SOX9P48436 RNU6-900P-201ENST00000384498 102 ntBASIC-0.08□□□□□ -2.42
SOX9P48436 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.08□□□□□ -2.42
SOX9P48436 RNU6-337P-201ENST00000391243 106 ntBASIC-0.08□□□□□ -2.42
SOX9P48436 SNORD49B-201ENST00000365172 72 ntBASIC-0.09□□□□□ -2.42
SOX9P48436 SNORD115-31-201ENST00000365318 82 ntBASIC-0.09□□□□□ -2.42
SOX9P48436 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.09□□□□□ -2.42
SOX9P48436 MIR1255B2-201ENST00000408618 67 ntBASIC-0.09□□□□□ -2.42
SOX9P48436 AC108676.2-201ENST00000605225 163 ntBASIC-0.09□□□□□ -2.42
SOX9P48436 RNU6-901P-201ENST00000384593 106 ntBASIC-0.1□□□□□ -2.43
SOX9P48436 MIR214-201ENST00000385214 110 ntBASIC-0.1□□□□□ -2.43
SOX9P48436 RNA5SP470-201ENST00000516463 106 ntBASIC-0.1□□□□□ -2.43
SOX9P48436 RNA5SP331-201ENST00000364986 107 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms