Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 MIR3179-3-201ENST00000579566 84 ntBASIC-0.76□□□□□ -2.53
PTPN4P29074 MIR3179-4-201ENST00000617599 84 ntBASIC-0.76□□□□□ -2.53
PTPN4P29074 SNORA33.1-201ENST00000364957 130 ntBASIC-0.77□□□□□ -2.53
PTPN4P29074 AP001318.4-201ENST00000616637 121 ntBASIC-0.77□□□□□ -2.53
PTPN4P29074 RNU6-208P-201ENST00000362431 107 ntBASIC-0.78□□□□□ -2.53
PTPN4P29074 RNU6-633P-201ENST00000362612 103 ntBASIC-0.78□□□□□ -2.53
PTPN4P29074 RNU6-755P-201ENST00000364400 103 ntBASIC-0.78□□□□□ -2.53
PTPN4P29074 SNORD74.6-201ENST00000364796 70 ntBASIC-0.78□□□□□ -2.53
PTPN4P29074 MIR196A1-201ENST00000388006 70 ntBASIC-0.78□□□□□ -2.53
PTPN4P29074 RNU6-721P-201ENST00000410155 105 ntBASIC-0.78□□□□□ -2.53
PTPN4P29074 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.78□□□□□ -2.53
PTPN4P29074 MIR4668-201ENST00000582284 70 ntBASIC-0.78□□□□□ -2.53
PTPN4P29074 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.79□□□□□ -2.54
PTPN4P29074 AL606753.1-201ENST00000427435 87 ntBASIC-0.79□□□□□ -2.54
PTPN4P29074 RNU6-752P-201ENST00000516376 102 ntBASIC-0.79□□□□□ -2.54
PTPN4P29074 MIR4320-201ENST00000636981 65 ntBASIC-0.79□□□□□ -2.54
PTPN4P29074 RNU6-340P-201ENST00000364005 107 ntBASIC-0.8□□□□□ -2.54
PTPN4P29074 SNORA62.4-201ENST00000365504 151 ntBASIC-0.8□□□□□ -2.54
PTPN4P29074 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.8□□□□□ -2.54
PTPN4P29074 RNU6-905P-201ENST00000384434 107 ntBASIC-0.8□□□□□ -2.54
PTPN4P29074 SNORD77.2-201ENST00000391045 68 ntBASIC-0.8□□□□□ -2.54
PTPN4P29074 MIR1468-201ENST00000410600 86 ntBASIC-0.8□□□□□ -2.54
PTPN4P29074 SNORA40.13-201ENST00000516379 120 ntBASIC-0.8□□□□□ -2.54
PTPN4P29074 MALAT1.1-201ENST00000618249 95 ntBASIC-0.8□□□□□ -2.54
PTPN4P29074 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.81□□□□□ -2.54
PTPN4P29074 RNU6-881P-201ENST00000516813 102 ntBASIC-0.81□□□□□ -2.54
PTPN4P29074 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
PTPN4P29074 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.82□□□□□ -2.54
PTPN4P29074 SNORD115-37-201ENST00000363768 82 ntBASIC-0.82□□□□□ -2.54
PTPN4P29074 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.82□□□□□ -2.54
PTPN4P29074 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.82□□□□□ -2.54
PTPN4P29074 AL353803.5-201ENST00000599815 141 ntBASIC-0.82□□□□□ -2.54
PTPN4P29074 RNU6-681P-201ENST00000364012 104 ntBASIC-0.83□□□□□ -2.54
PTPN4P29074 MIR521-2-201ENST00000384818 87 ntBASIC-0.83□□□□□ -2.54
PTPN4P29074 AP000533.3-201ENST00000447704 118 ntBASIC-0.83□□□□□ -2.54
PTPN4P29074 AC022137.1-201ENST00000483735 151 ntBASIC-0.83□□□□□ -2.54
PTPN4P29074 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.84□□□□□ -2.54
PTPN4P29074 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.84□□□□□ -2.54
PTPN4P29074 SNORD116-22-201ENST00000384430 92 ntBASIC-0.84□□□□□ -2.54
PTPN4P29074 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.84□□□□□ -2.54
PTPN4P29074 MIR1255B2-201ENST00000408618 67 ntBASIC-0.84□□□□□ -2.54
PTPN4P29074 RNA5SP470-201ENST00000516463 106 ntBASIC-0.84□□□□□ -2.54
PTPN4P29074 CYP3A54P-201ENST00000566950 75 ntBASIC-0.84□□□□□ -2.54
PTPN4P29074 MIR6739-201ENST00000622461 75 ntBASIC-0.84□□□□□ -2.54
PTPN4P29074 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.85□□□□□ -2.55
PTPN4P29074 RNU6-219P-201ENST00000364728 107 ntBASIC-0.85□□□□□ -2.55
PTPN4P29074 MIR517B-201ENST00000385102 67 ntBASIC-0.85□□□□□ -2.55
PTPN4P29074 AC093729.1-201ENST00000513074 128 ntBASIC-0.85□□□□□ -2.55
PTPN4P29074 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.85□□□□□ -2.55
PTPN4P29074 RNU6-789P-201ENST00000517105 102 ntBASIC-0.85□□□□□ -2.55
PTPN4P29074 MIR4464-201ENST00000580818 92 ntBASIC-0.85□□□□□ -2.55
PTPN4P29074 RNU6-624P-201ENST00000363411 107 ntBASIC-0.86□□□□□ -2.55
PTPN4P29074 RNU6-215P-201ENST00000365169 102 ntBASIC-0.86□□□□□ -2.55
PTPN4P29074 RNU6-32P-201ENST00000383948 107 ntBASIC-0.86□□□□□ -2.55
PTPN4P29074 RNU6-13P-201ENST00000384248 107 ntBASIC-0.86□□□□□ -2.55
PTPN4P29074 RNU6-12P-201ENST00000384604 107 ntBASIC-0.86□□□□□ -2.55
PTPN4P29074 RNU6-41P-201ENST00000384741 107 ntBASIC-0.86□□□□□ -2.55
PTPN4P29074 SNORD83B-201ENST00000386745 93 ntBASIC-0.86□□□□□ -2.55
PTPN4P29074 AL035461.1-201ENST00000421490 332 ntBASIC-0.86□□□□□ -2.55
PTPN4P29074 SNORA63.4-201ENST00000362763 126 ntBASIC-0.87□□□□□ -2.55
PTPN4P29074 RNU6-497P-201ENST00000365316 104 ntBASIC-0.87□□□□□ -2.55
PTPN4P29074 MIR124-2-201ENST00000385081 109 ntBASIC-0.87□□□□□ -2.55
PTPN4P29074 RNU6-402P-201ENST00000410678 103 ntBASIC-0.87□□□□□ -2.55
PTPN4P29074 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.87□□□□□ -2.55
PTPN4P29074 RNU6-640P-201ENST00000363693 105 ntBASIC-0.88□□□□□ -2.55
PTPN4P29074 SNORD20-201ENST00000384550 80 ntBASIC-0.88□□□□□ -2.55
PTPN4P29074 MIR601-201ENST00000385256 79 ntBASIC-0.88□□□□□ -2.55
PTPN4P29074 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.88□□□□□ -2.55
PTPN4P29074 SNORD18.2-201ENST00000459604 70 ntBASIC-0.88□□□□□ -2.55
PTPN4P29074 RNA5SP461-201ENST00000516451 104 ntBASIC-0.88□□□□□ -2.55
PTPN4P29074 RNU6-919P-201ENST00000516731 104 ntBASIC-0.88□□□□□ -2.55
PTPN4P29074 AC140658.3-201ENST00000567603 271 ntBASIC-0.88□□□□□ -2.55
PTPN4P29074 MIR4723-201ENST00000585070 81 ntBASIC-0.88□□□□□ -2.55
PTPN4P29074 MIR6888-201ENST00000621977 67 ntBASIC-0.88□□□□□ -2.55
PTPN4P29074 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.89□□□□□ -2.55
PTPN4P29074 MIR488-201ENST00000365739 83 ntBASIC-0.89□□□□□ -2.55
PTPN4P29074 RNU6-147P-201ENST00000383983 107 ntBASIC-0.89□□□□□ -2.55
PTPN4P29074 RNU6-406P-201ENST00000516470 107 ntBASIC-0.89□□□□□ -2.55
PTPN4P29074 RNU6-267P-201ENST00000516714 103 ntBASIC-0.89□□□□□ -2.55
PTPN4P29074 AL445584.3-201ENST00000617173 78 ntBASIC-0.89□□□□□ -2.55
PTPN4P29074 RNA5SP192-201ENST00000364404 120 ntBASIC-0.9□□□□□ -2.55
PTPN4P29074 MIR3115-201ENST00000577915 68 ntBASIC-0.9□□□□□ -2.55
PTPN4P29074 MIR378F-201ENST00000578143 78 ntBASIC-0.9□□□□□ -2.55
PTPN4P29074 MIR548BB-201ENST00000626714 66 ntBASIC-0.9□□□□□ -2.55
PTPN4P29074 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.91□□□□□ -2.56
PTPN4P29074 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.91□□□□□ -2.56
PTPN4P29074 RNU7-154P-201ENST00000516194 62 ntBASIC-0.92□□□□□ -2.56
PTPN4P29074 RNU6-557P-201ENST00000516842 110 ntBASIC-0.92□□□□□ -2.56
PTPN4P29074 RNU6-24P-201ENST00000384440 107 ntBASIC-0.93□□□□□ -2.56
PTPN4P29074 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.93□□□□□ -2.56
PTPN4P29074 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.93□□□□□ -2.56
PTPN4P29074 RNU4-61P-201ENST00000411243 107 ntBASIC-0.94□□□□□ -2.56
PTPN4P29074 RNU6-675P-201ENST00000384236 104 ntBASIC-0.95□□□□□ -2.56
PTPN4P29074 MIR519A2-201ENST00000384990 87 ntBASIC-0.95□□□□□ -2.56
PTPN4P29074 RNU6-518P-201ENST00000516056 96 ntBASIC-0.95□□□□□ -2.56
PTPN4P29074 RNU6-656P-201ENST00000516785 107 ntBASIC-0.95□□□□□ -2.56
PTPN4P29074 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.95□□□□□ -2.56
PTPN4P29074 MIR3165-201ENST00000579874 75 ntBASIC-0.95□□□□□ -2.56
PTPN4P29074 MIR198-201ENST00000637333 62 ntBASIC-0.95□□□□□ -2.56
PTPN4P29074 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 259.4 ms