Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 SNORA19-201ENST00000384737 128 ntBASIC-1.13□□□□□ -2.59
VIMP08670 MT-TR-201ENST00000387439 65 ntBASIC-1.13□□□□□ -2.59
VIMP08670 MIR1236-201ENST00000408340 102 ntBASIC-1.13□□□□□ -2.59
VIMP08670 MIR1255B2-201ENST00000408618 67 ntBASIC-1.13□□□□□ -2.59
VIMP08670 U7.3-201ENST00000616123 62 ntBASIC-1.13□□□□□ -2.59
VIMP08670 AL445584.3-201ENST00000617173 78 ntBASIC-1.13□□□□□ -2.59
VIMP08670 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.13□□□□□ -2.59
VIMP08670 MIR6888-201ENST00000621977 67 ntBASIC-1.13□□□□□ -2.59
VIMP08670 RNU6-924P-201ENST00000362926 108 ntBASIC-1.14□□□□□ -2.59
VIMP08670 RNA5SP266-201ENST00000410273 108 ntBASIC-1.14□□□□□ -2.59
VIMP08670 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.14□□□□□ -2.59
VIMP08670 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.15□□□□□ -2.59
VIMP08670 RNU6-226P-201ENST00000363778 107 ntBASIC-1.15□□□□□ -2.59
VIMP08670 AL691482.2-201ENST00000457453 84 ntBASIC-1.15□□□□□ -2.59
VIMP08670 RNA5SP180-201ENST00000516181 101 ntBASIC-1.15□□□□□ -2.59
VIMP08670 MIR3657-201ENST00000584818 117 ntBASIC-1.15□□□□□ -2.59
VIMP08670 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.15□□□□□ -2.59
VIMP08670 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.16□□□□□ -2.6
VIMP08670 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.16□□□□□ -2.6
VIMP08670 MIR5591-201ENST00000578248 65 ntBASIC-1.16□□□□□ -2.6
VIMP08670 U6.81-201ENST00000612550 106 ntBASIC-1.16□□□□□ -2.6
VIMP08670 AC132825.6-201ENST00000638861 357 ntBASIC-1.16□□□□□ -2.6
VIMP08670 SNORA2.1-201ENST00000363089 137 ntBASIC-1.17□□□□□ -2.6
VIMP08670 MIR8485-201ENST00000401372 91 ntBASIC-1.17□□□□□ -2.6
VIMP08670 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.18□□□□□ -2.6
VIMP08670 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.18□□□□□ -2.6
VIMP08670 RNU7-153P-201ENST00000516455 62 ntBASIC-1.18□□□□□ -2.6
VIMP08670 MIR1246-201ENST00000636535 73 ntBASIC-1.18□□□□□ -2.6
VIMP08670 SNORD115-33-201ENST00000363723 82 ntBASIC-1.19□□□□□ -2.6
VIMP08670 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.19□□□□□ -2.6
VIMP08670 SNORA26.4-201ENST00000391188 123 ntBASIC-1.19□□□□□ -2.6
VIMP08670 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.19□□□□□ -2.6
VIMP08670 MIR1285-2-201ENST00000408311 88 ntBASIC-1.19□□□□□ -2.6
VIMP08670 RNU6-479P-201ENST00000516348 105 ntBASIC-1.19□□□□□ -2.6
VIMP08670 CYP3A54P-201ENST00000566950 75 ntBASIC-1.19□□□□□ -2.6
VIMP08670 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.19□□□□□ -2.6
VIMP08670 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.2□□□□□ -2.6
VIMP08670 RNU6-589P-201ENST00000516485 107 ntBASIC-1.2□□□□□ -2.6
VIMP08670 MIR29B1-201ENST00000385015 81 ntBASIC-1.21□□□□□ -2.6
VIMP08670 RNU6-576P-201ENST00000390854 102 ntBASIC-1.21□□□□□ -2.6
VIMP08670 RNU4-61P-201ENST00000411243 107 ntBASIC-1.21□□□□□ -2.6
VIMP08670 SNX3P1X-201ENST00000414887 175 ntBASIC-1.21□□□□□ -2.6
VIMP08670 RNA5SP476-201ENST00000516613 103 ntBASIC-1.21□□□□□ -2.6
VIMP08670 MIR4770-201ENST00000579149 58 ntBASIC-1.21□□□□□ -2.6
VIMP08670 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.21□□□□□ -2.6
VIMP08670 RNU6-766P-201ENST00000362478 107 ntBASIC-1.22□□□□□ -2.6
VIMP08670 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.22□□□□□ -2.6
VIMP08670 MIR548M-201ENST00000408260 86 ntBASIC-1.22□□□□□ -2.6
VIMP08670 RNU7-134P-201ENST00000458997 64 ntBASIC-1.22□□□□□ -2.6
VIMP08670 HAR1A.1-201ENST00000459583 118 ntBASIC-1.22□□□□□ -2.6
VIMP08670 SNORD63.1-201ENST00000516178 80 ntBASIC-1.22□□□□□ -2.6
VIMP08670 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.22□□□□□ -2.6
VIMP08670 RNU6-158P-201ENST00000517104 100 ntBASIC-1.22□□□□□ -2.6
VIMP08670 RNU6-834P-201ENST00000362367 110 ntBASIC-1.23□□□□□ -2.61
VIMP08670 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.23□□□□□ -2.61
VIMP08670 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.23□□□□□ -2.61
VIMP08670 AL450471.1-201ENST00000447509 127 ntBASIC-1.23□□□□□ -2.61
VIMP08670 RNU6-22P-201ENST00000384355 107 ntBASIC-1.24□□□□□ -2.61
VIMP08670 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.24□□□□□ -2.61
VIMP08670 RNU7-154P-201ENST00000516194 62 ntBASIC-1.24□□□□□ -2.61
VIMP08670 MIR6818-201ENST00000621576 65 ntBASIC-1.24□□□□□ -2.61
VIMP08670 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.24□□□□□ -2.61
VIMP08670 MIR198-201ENST00000637333 62 ntBASIC-1.24□□□□□ -2.61
VIMP08670 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.25□□□□□ -2.61
VIMP08670 SNORD115-27-201ENST00000364430 82 ntBASIC-1.25□□□□□ -2.61
VIMP08670 MIR601-201ENST00000385256 79 ntBASIC-1.25□□□□□ -2.61
VIMP08670 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.25□□□□□ -2.61
VIMP08670 MIR4520-1-201ENST00000582609 70 ntBASIC-1.25□□□□□ -2.61
VIMP08670 MIR365A-201ENST00000362260 87 ntBASIC-1.26□□□□□ -2.61
VIMP08670 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.26□□□□□ -2.61
VIMP08670 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.26□□□□□ -2.61
VIMP08670 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.26□□□□□ -2.61
VIMP08670 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.26□□□□□ -2.61
VIMP08670 MIR521-2-201ENST00000384818 87 ntBASIC-1.26□□□□□ -2.61
VIMP08670 MIR889-201ENST00000401280 79 ntBASIC-1.26□□□□□ -2.61
VIMP08670 MTATP8P2-201ENST00000435212 202 ntBASIC-1.26□□□□□ -2.61
VIMP08670 AL353691.2-201ENST00000443795 59 ntBASIC-1.26□□□□□ -2.61
VIMP08670 MIR4441-201ENST00000582623 100 ntBASIC-1.26□□□□□ -2.61
VIMP08670 MIR519C-201ENST00000385053 87 ntBASIC-1.27□□□□□ -2.61
VIMP08670 RNU6-518P-201ENST00000516056 96 ntBASIC-1.27□□□□□ -2.61
VIMP08670 MIR519A2-201ENST00000384990 87 ntBASIC-1.28□□□□□ -2.61
VIMP08670 MIR527-201ENST00000385244 85 ntBASIC-1.28□□□□□ -2.61
VIMP08670 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.29□□□□□ -2.62
VIMP08670 RNU6-752P-201ENST00000516376 102 ntBASIC-1.29□□□□□ -2.62
VIMP08670 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.29□□□□□ -2.62
VIMP08670 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.3□□□□□ -2.62
VIMP08670 RNU6-340P-201ENST00000364005 107 ntBASIC-1.31□□□□□ -2.62
VIMP08670 SNORD115-22-201ENST00000364456 82 ntBASIC-1.31□□□□□ -2.62
VIMP08670 RNU6-540P-201ENST00000384622 101 ntBASIC-1.31□□□□□ -2.62
VIMP08670 MIR507-201ENST00000385234 94 ntBASIC-1.31□□□□□ -2.62
VIMP08670 SNORD77.2-201ENST00000391045 68 ntBASIC-1.31□□□□□ -2.62
VIMP08670 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.31□□□□□ -2.62
VIMP08670 AL021921.1-201ENST00000442774 93 ntBASIC-1.31□□□□□ -2.62
VIMP08670 MIR6739-201ENST00000622461 75 ntBASIC-1.31□□□□□ -2.62
VIMP08670 AL031737.1-201ENST00000450125 223 ntBASIC-1.32□□□□□ -2.62
VIMP08670 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.32□□□□□ -2.62
VIMP08670 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
VIMP08670 MIR6502-201ENST00000617296 76 ntBASIC-1.32□□□□□ -2.62
VIMP08670 MIR2052-201ENST00000636055 55 ntBASIC-1.32□□□□□ -2.62
VIMP08670 RNU6-681P-201ENST00000364012 104 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 263.5 ms