Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR4694-201ENST00000578534 80 ntBASIC-2.36□□□□□ -2.79
TNFP01375 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.37□□□□□ -2.79
TNFP01375 MIR548P-201ENST00000408336 84 ntBASIC-2.37□□□□□ -2.79
TNFP01375 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.37□□□□□ -2.79
TNFP01375 RNU6-373P-201ENST00000411247 98 ntBASIC-2.37□□□□□ -2.79
TNFP01375 AL450471.1-201ENST00000447509 127 ntBASIC-2.37□□□□□ -2.79
TNFP01375 RNU6-699P-201ENST00000517081 110 ntBASIC-2.37□□□□□ -2.79
TNFP01375 MIR376A1-201ENST00000616574 68 ntBASIC-2.37□□□□□ -2.79
TNFP01375 AL603755.1-201ENST00000619504 163 ntBASIC-2.37□□□□□ -2.79
TNFP01375 SNORA25.1-201ENST00000362326 128 ntBASIC-2.38□□□□□ -2.79
TNFP01375 Y_RNA.9-201ENST00000362354 101 ntBASIC-2.38□□□□□ -2.79
TNFP01375 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.38□□□□□ -2.79
TNFP01375 RNU4-40P-201ENST00000364351 143 ntBASIC-2.38□□□□□ -2.79
TNFP01375 RNY3P16-201ENST00000516338 101 ntBASIC-2.38□□□□□ -2.79
TNFP01375 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.38□□□□□ -2.79
TNFP01375 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.38□□□□□ -2.79
TNFP01375 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.39□□□□□ -2.79
TNFP01375 RNU6-810P-201ENST00000364001 107 ntBASIC-2.39□□□□□ -2.79
TNFP01375 RNU6-788P-201ENST00000390967 104 ntBASIC-2.39□□□□□ -2.79
TNFP01375 Y_RNA.713-201ENST00000517013 96 ntBASIC-2.39□□□□□ -2.79
TNFP01375 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.39□□□□□ -2.79
TNFP01375 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.4□□□□□ -2.79
TNFP01375 RNU6-300P-201ENST00000459080 104 ntBASIC-2.4□□□□□ -2.79
TNFP01375 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-2.4□□□□□ -2.79
TNFP01375 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.4□□□□□ -2.79
TNFP01375 RNU7-160P-201ENST00000516660 62 ntBASIC-2.4□□□□□ -2.79
TNFP01375 MIR3121-201ENST00000579680 77 ntBASIC-2.4□□□□□ -2.79
TNFP01375 MIR4282-201ENST00000583613 67 ntBASIC-2.4□□□□□ -2.79
TNFP01375 MIR4439-201ENST00000583746 80 ntBASIC-2.4□□□□□ -2.79
TNFP01375 AL035470.1-201ENST00000622571 220 ntBASIC-2.4□□□□□ -2.79
TNFP01375 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.4□□□□□ -2.79
TNFP01375 RNY3P2-201ENST00000362918 102 ntBASIC-2.41□□□□□ -2.8
TNFP01375 MIR620-201ENST00000385232 95 ntBASIC-2.41□□□□□ -2.8
TNFP01375 RNU6-795P-201ENST00000516323 103 ntBASIC-2.41□□□□□ -2.8
TNFP01375 RNU6-781P-201ENST00000516377 101 ntBASIC-2.41□□□□□ -2.8
TNFP01375 RNU6-1188P-201ENST00000363795 107 ntBASIC-2.42□□□□□ -2.8
TNFP01375 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.42□□□□□ -2.8
TNFP01375 SNORD58A-201ENST00000383875 65 ntBASIC-2.42□□□□□ -2.8
TNFP01375 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.42□□□□□ -2.8
TNFP01375 SNORA63-201ENST00000363450 132 ntBASIC-2.43□□□□□ -2.8
TNFP01375 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.43□□□□□ -2.8
TNFP01375 RNU6-755P-201ENST00000364400 103 ntBASIC-2.43□□□□□ -2.8
TNFP01375 RNU6-806P-201ENST00000365147 105 ntBASIC-2.43□□□□□ -2.8
TNFP01375 MTND4P17-201ENST00000470444 350 ntBASIC-2.43□□□□□ -2.8
TNFP01375 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.43□□□□□ -2.8
TNFP01375 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.43□□□□□ -2.8
TNFP01375 AC015540.1-201ENST00000615828 501 ntBASIC-2.43□□□□□ -2.8
TNFP01375 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.43□□□□□ -2.8
TNFP01375 MIR3658-201ENST00000636291 56 ntBASIC-2.43□□□□□ -2.8
TNFP01375 SNORD45.1-201ENST00000363181 77 ntBASIC-2.44□□□□□ -2.8
TNFP01375 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.44□□□□□ -2.8
TNFP01375 RNU6-681P-201ENST00000364012 104 ntBASIC-2.44□□□□□ -2.8
TNFP01375 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.44□□□□□ -2.8
TNFP01375 Y_RNA.359-201ENST00000365498 102 ntBASIC-2.44□□□□□ -2.8
TNFP01375 Y_RNA.445-201ENST00000384168 102 ntBASIC-2.44□□□□□ -2.8
TNFP01375 MIR1263-201ENST00000408324 86 ntBASIC-2.44□□□□□ -2.8
TNFP01375 RNU6-956P-201ENST00000458868 103 ntBASIC-2.44□□□□□ -2.8
TNFP01375 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.44□□□□□ -2.8
TNFP01375 MIR3675-201ENST00000583661 73 ntBASIC-2.44□□□□□ -2.8
TNFP01375 RPS29P30-201ENST00000600975 111 ntBASIC-2.44□□□□□ -2.8
TNFP01375 RNA5SP215-201ENST00000363440 122 ntBASIC-2.45□□□□□ -2.8
TNFP01375 RNA5SP224-201ENST00000365069 126 ntBASIC-2.45□□□□□ -2.8
TNFP01375 Y_RNA.402-201ENST00000383972 102 ntBASIC-2.45□□□□□ -2.8
TNFP01375 SNORA75.5-201ENST00000391291 81 ntBASIC-2.45□□□□□ -2.8
TNFP01375 AC074348.1-201ENST00000426503 132 ntBASIC-2.45□□□□□ -2.8
TNFP01375 MTND5P22-201ENST00000458380 195 ntBASIC-2.45□□□□□ -2.8
TNFP01375 Y_RNA.688-201ENST00000516565 95 ntBASIC-2.45□□□□□ -2.8
TNFP01375 MIR4643-201ENST00000577473 78 ntBASIC-2.45□□□□□ -2.8
TNFP01375 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.46□□□□□ -2.8
TNFP01375 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.46□□□□□ -2.8
TNFP01375 RNU6-639P-201ENST00000384074 107 ntBASIC-2.46□□□□□ -2.8
TNFP01375 SNORA8.1-201ENST00000384250 140 ntBASIC-2.46□□□□□ -2.8
TNFP01375 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.46□□□□□ -2.8
TNFP01375 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-2.46□□□□□ -2.8
TNFP01375 MTND4LP30-201ENST00000454092 297 ntBASIC-2.46□□□□□ -2.8
TNFP01375 SNORD127-201ENST00000458892 86 ntBASIC-2.46□□□□□ -2.8
TNFP01375 SNORA40.14-201ENST00000516543 86 ntBASIC-2.46□□□□□ -2.8
TNFP01375 SNORA20.3-201ENST00000516880 132 ntBASIC-2.46□□□□□ -2.8
TNFP01375 SNORA40.16-201ENST00000517238 121 ntBASIC-2.46□□□□□ -2.8
TNFP01375 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.46□□□□□ -2.8
TNFP01375 RNU6-275P-201ENST00000364910 107 ntBASIC-2.47□□□□□ -2.8
TNFP01375 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.47□□□□□ -2.8
TNFP01375 SNORD113.1-201ENST00000363280 73 ntBASIC-2.48□□□□□ -2.81
TNFP01375 RNU6-1119P-201ENST00000384349 108 ntBASIC-2.48□□□□□ -2.81
TNFP01375 MIR656-201ENST00000385224 78 ntBASIC-2.48□□□□□ -2.81
TNFP01375 AC020661.2-201ENST00000560114 134 ntBASIC-2.48□□□□□ -2.81
TNFP01375 DLEU2_1.1-201ENST00000612089 120 ntBASIC-2.48□□□□□ -2.81
TNFP01375 RNU6-624P-201ENST00000363411 107 ntBASIC-2.49□□□□□ -2.81
TNFP01375 SNORD45B-201ENST00000364617 72 ntBASIC-2.49□□□□□ -2.81
TNFP01375 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.49□□□□□ -2.81
TNFP01375 RNU6-259P-201ENST00000383999 107 ntBASIC-2.49□□□□□ -2.81
TNFP01375 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.49□□□□□ -2.81
TNFP01375 SNORD116-24-201ENST00000384549 92 ntBASIC-2.49□□□□□ -2.81
TNFP01375 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.49□□□□□ -2.81
TNFP01375 DEFB108C-201ENST00000400154 252 ntBASIC-2.49□□□□□ -2.81
TNFP01375 MIR1236-201ENST00000408340 102 ntBASIC-2.49□□□□□ -2.81
TNFP01375 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.49□□□□□ -2.81
TNFP01375 RNY4P13-201ENST00000384284 96 ntBASIC-2.5□□□□□ -2.81
TNFP01375 RNA5SP136-201ENST00000410906 107 ntBASIC-2.5□□□□□ -2.81
TNFP01375 AL451105.1-201ENST00000450005 189 ntBASIC-2.5□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms