Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 SNORD115-23-201ENST00000364461 82 ntBASIC-0.96□□□□□ -2.56
DDX58O95786 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.96□□□□□ -2.56
DDX58O95786 AC022137.1-201ENST00000483735 151 ntBASIC-0.96□□□□□ -2.56
DDX58O95786 RNU6-789P-201ENST00000517105 102 ntBASIC-0.96□□□□□ -2.56
DDX58O95786 RNY1P9-201ENST00000532431 109 ntBASIC-0.96□□□□□ -2.56
DDX58O95786 SNORA2.1-201ENST00000363089 137 ntBASIC-0.97□□□□□ -2.56
DDX58O95786 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.97□□□□□ -2.56
DDX58O95786 SNORD113-1-201ENST00000365321 69 ntBASIC-0.97□□□□□ -2.56
DDX58O95786 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.97□□□□□ -2.56
DDX58O95786 AP000533.3-201ENST00000447704 118 ntBASIC-0.97□□□□□ -2.56
DDX58O95786 MIR4668-201ENST00000582284 70 ntBASIC-0.97□□□□□ -2.56
DDX58O95786 AP001318.4-201ENST00000616637 121 ntBASIC-0.97□□□□□ -2.56
DDX58O95786 RNU6-681P-201ENST00000364012 104 ntBASIC-0.98□□□□□ -2.57
DDX58O95786 RNU6-431P-201ENST00000383874 107 ntBASIC-0.98□□□□□ -2.57
DDX58O95786 RNU6-905P-201ENST00000384434 107 ntBASIC-0.98□□□□□ -2.57
DDX58O95786 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.98□□□□□ -2.57
DDX58O95786 SNORD77.2-201ENST00000391045 68 ntBASIC-0.99□□□□□ -2.57
DDX58O95786 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.99□□□□□ -2.57
DDX58O95786 SNORD57-201ENST00000448188 72 ntBASIC-0.99□□□□□ -2.57
DDX58O95786 YWHAEP3-201ENST00000582767 121 ntBASIC-0.99□□□□□ -2.57
DDX58O95786 MIR4499-201ENST00000584834 69 ntBASIC-0.99□□□□□ -2.57
DDX58O95786 SNORA33.1-201ENST00000364957 130 ntBASIC-1□□□□□ -2.57
DDX58O95786 SNORD116-22-201ENST00000384430 92 ntBASIC-1□□□□□ -2.57
DDX58O95786 MIR147A-201ENST00000385079 72 ntBASIC-1□□□□□ -2.57
DDX58O95786 SNORD64-201ENST00000386683 67 ntBASIC-1□□□□□ -2.57
DDX58O95786 SCARNA17-201ENST00000516183 144 ntBASIC-1□□□□□ -2.57
DDX58O95786 RNU6-633P-201ENST00000362612 103 ntBASIC-1.01□□□□□ -2.57
DDX58O95786 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.01□□□□□ -2.57
DDX58O95786 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
DDX58O95786 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.01□□□□□ -2.57
DDX58O95786 uc_338.19-201ENST00000616808 99 ntBASIC-1.01□□□□□ -2.57
DDX58O95786 MALAT1.1-201ENST00000618249 95 ntBASIC-1.01□□□□□ -2.57
DDX58O95786 AC090617.8-201ENST00000623339 167 ntBASIC-1.01□□□□□ -2.57
DDX58O95786 RNU6-340P-201ENST00000364005 107 ntBASIC-1.02□□□□□ -2.57
DDX58O95786 SNORA62.4-201ENST00000365504 151 ntBASIC-1.02□□□□□ -2.57
DDX58O95786 SNORA63.4-201ENST00000362763 126 ntBASIC-1.03□□□□□ -2.57
DDX58O95786 SCARNA18B-201ENST00000458806 135 ntBASIC-1.03□□□□□ -2.57
DDX58O95786 AC093729.1-201ENST00000513074 128 ntBASIC-1.03□□□□□ -2.57
DDX58O95786 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.03□□□□□ -2.57
DDX58O95786 RNU6-752P-201ENST00000516376 102 ntBASIC-1.03□□□□□ -2.57
DDX58O95786 MIR382-201ENST00000637119 76 ntBASIC-1.03□□□□□ -2.57
DDX58O95786 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.04□□□□□ -2.58
DDX58O95786 RNU6-32P-201ENST00000383948 107 ntBASIC-1.04□□□□□ -2.58
DDX58O95786 RNU6-13P-201ENST00000384248 107 ntBASIC-1.04□□□□□ -2.58
DDX58O95786 RNU6-12P-201ENST00000384604 107 ntBASIC-1.04□□□□□ -2.58
DDX58O95786 RNU6-41P-201ENST00000384741 107 ntBASIC-1.04□□□□□ -2.58
DDX58O95786 RNU6-755P-201ENST00000364400 103 ntBASIC-1.05□□□□□ -2.58
DDX58O95786 MIR1255B2-201ENST00000408618 67 ntBASIC-1.05□□□□□ -2.58
DDX58O95786 SNORD18.2-201ENST00000459604 70 ntBASIC-1.05□□□□□ -2.58
DDX58O95786 CYP3A54P-201ENST00000566950 75 ntBASIC-1.05□□□□□ -2.58
DDX58O95786 AL353803.5-201ENST00000599815 141 ntBASIC-1.05□□□□□ -2.58
DDX58O95786 SNORD20-201ENST00000384550 80 ntBASIC-1.06□□□□□ -2.58
DDX58O95786 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.06□□□□□ -2.58
DDX58O95786 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.07□□□□□ -2.58
DDX58O95786 MIR124-2-201ENST00000385081 109 ntBASIC-1.07□□□□□ -2.58
DDX58O95786 RNU6-402P-201ENST00000410678 103 ntBASIC-1.07□□□□□ -2.58
DDX58O95786 RNA5SP470-201ENST00000516463 106 ntBASIC-1.07□□□□□ -2.58
DDX58O95786 RNU6-919P-201ENST00000516731 104 ntBASIC-1.07□□□□□ -2.58
DDX58O95786 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.08□□□□□ -2.58
DDX58O95786 MIR521-2-201ENST00000384818 87 ntBASIC-1.08□□□□□ -2.58
DDX58O95786 RNU4-61P-201ENST00000411243 107 ntBASIC-1.08□□□□□ -2.58
DDX58O95786 AC140658.3-201ENST00000567603 271 ntBASIC-1.08□□□□□ -2.58
DDX58O95786 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
DDX58O95786 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.09□□□□□ -2.58
DDX58O95786 MIR378F-201ENST00000578143 78 ntBASIC-1.09□□□□□ -2.58
DDX58O95786 MIR548AI-201ENST00000579940 88 ntBASIC-1.09□□□□□ -2.58
DDX58O95786 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.1□□□□□ -2.59
DDX58O95786 RNU6-215P-201ENST00000365169 102 ntBASIC-1.11□□□□□ -2.59
DDX58O95786 RNU6-147P-201ENST00000383983 107 ntBASIC-1.11□□□□□ -2.59
DDX58O95786 SNX3P1X-201ENST00000414887 175 ntBASIC-1.11□□□□□ -2.59
DDX58O95786 MIR4464-201ENST00000580818 92 ntBASIC-1.11□□□□□ -2.59
DDX58O95786 AL035461.1-201ENST00000421490 332 ntBASIC-1.12□□□□□ -2.59
DDX58O95786 RNU6-267P-201ENST00000516714 103 ntBASIC-1.12□□□□□ -2.59
DDX58O95786 MIR4324-201ENST00000584846 72 ntBASIC-1.12□□□□□ -2.59
DDX58O95786 SNORD114-17-201ENST00000364699 75 ntBASIC-1.13□□□□□ -2.59
DDX58O95786 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.13□□□□□ -2.59
DDX58O95786 MIR6739-201ENST00000622461 75 ntBASIC-1.13□□□□□ -2.59
DDX58O95786 RNU6-219P-201ENST00000364728 107 ntBASIC-1.14□□□□□ -2.59
DDX58O95786 MIR587-201ENST00000384845 96 ntBASIC-1.14□□□□□ -2.59
DDX58O95786 MIR6738-201ENST00000619620 64 ntBASIC-1.14□□□□□ -2.59
DDX58O95786 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.15□□□□□ -2.59
DDX58O95786 RNU6-406P-201ENST00000516470 107 ntBASIC-1.15□□□□□ -2.59
DDX58O95786 MIR548BB-201ENST00000626714 66 ntBASIC-1.15□□□□□ -2.59
DDX58O95786 RNU6-624P-201ENST00000363411 107 ntBASIC-1.16□□□□□ -2.6
DDX58O95786 MIR488-201ENST00000365739 83 ntBASIC-1.16□□□□□ -2.6
DDX58O95786 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.17□□□□□ -2.6
DDX58O95786 MIR1468-201ENST00000410600 86 ntBASIC-1.17□□□□□ -2.6
DDX58O95786 RNU6-640P-201ENST00000363693 105 ntBASIC-1.18□□□□□ -2.6
DDX58O95786 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.18□□□□□ -2.6
DDX58O95786 MIR4306-201ENST00000583390 91 ntBASIC-1.18□□□□□ -2.6
DDX58O95786 MIR6888-201ENST00000621977 67 ntBASIC-1.18□□□□□ -2.6
DDX58O95786 RNU6-44P-201ENST00000384045 107 ntBASIC-1.19□□□□□ -2.6
DDX58O95786 snoU83B.1-201ENST00000517136 88 ntBASIC-1.19□□□□□ -2.6
DDX58O95786 AL445584.3-201ENST00000617173 78 ntBASIC-1.19□□□□□ -2.6
DDX58O95786 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.19□□□□□ -2.6
DDX58O95786 RNU6-10P-201ENST00000384036 107 ntBASIC-1.2□□□□□ -2.6
DDX58O95786 RNU6-24P-201ENST00000384440 107 ntBASIC-1.2□□□□□ -2.6
DDX58O95786 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.2□□□□□ -2.6
DDX58O95786 RNU6-518P-201ENST00000516056 96 ntBASIC-1.2□□□□□ -2.6
DDX58O95786 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms