Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 RNU6-226P-201ENST00000363778 107 ntBASIC-1.07□□□□□ -2.58
CPSF4O95639 SNORD116-14-201ENST00000383894 92 ntBASIC-1.07□□□□□ -2.58
CPSF4O95639 SNORD116-17-201ENST00000383929 92 ntBASIC-1.07□□□□□ -2.58
CPSF4O95639 SNORD116-15-201ENST00000384445 92 ntBASIC-1.07□□□□□ -2.58
CPSF4O95639 SNORD116-19-201ENST00000384729 92 ntBASIC-1.07□□□□□ -2.58
CPSF4O95639 RNU7-153P-201ENST00000516455 62 ntBASIC-1.07□□□□□ -2.58
CPSF4O95639 AC090425.1-201ENST00000610007 140 ntBASIC-1.07□□□□□ -2.58
CPSF4O95639 U4.2-201ENST00000618561 85 ntBASIC-1.07□□□□□ -2.58
CPSF4O95639 MIR1302-5-201ENST00000408164 150 ntBASIC-1.08□□□□□ -2.58
CPSF4O95639 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.08□□□□□ -2.58
CPSF4O95639 RNU7-154P-201ENST00000516194 62 ntBASIC-1.08□□□□□ -2.58
CPSF4O95639 MIR6739-201ENST00000622461 75 ntBASIC-1.08□□□□□ -2.58
CPSF4O95639 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.09□□□□□ -2.58
CPSF4O95639 MIR519A2-201ENST00000384990 87 ntBASIC-1.09□□□□□ -2.58
CPSF4O95639 AL450471.1-201ENST00000447509 127 ntBASIC-1.09□□□□□ -2.58
CPSF4O95639 SNORD63.1-201ENST00000516178 80 ntBASIC-1.09□□□□□ -2.58
CPSF4O95639 RNU6-162P-201ENST00000516228 103 ntBASIC-1.09□□□□□ -2.58
CPSF4O95639 RNU6-752P-201ENST00000516376 102 ntBASIC-1.09□□□□□ -2.58
CPSF4O95639 AC138207.3-201ENST00000585289 166 ntBASIC-1.09□□□□□ -2.58
CPSF4O95639 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.1□□□□□ -2.59
CPSF4O95639 SNORD115-33-201ENST00000363723 82 ntBASIC-1.1□□□□□ -2.59
CPSF4O95639 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.1□□□□□ -2.59
CPSF4O95639 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.1□□□□□ -2.59
CPSF4O95639 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.1□□□□□ -2.59
CPSF4O95639 RNU6-746P-201ENST00000384112 109 ntBASIC-1.1□□□□□ -2.59
CPSF4O95639 SNORA26.4-201ENST00000391188 123 ntBASIC-1.1□□□□□ -2.59
CPSF4O95639 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.1□□□□□ -2.59
CPSF4O95639 RNU6-518P-201ENST00000516056 96 ntBASIC-1.1□□□□□ -2.59
CPSF4O95639 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.1□□□□□ -2.59
CPSF4O95639 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.1□□□□□ -2.59
CPSF4O95639 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.1□□□□□ -2.59
CPSF4O95639 RNU6-109P-201ENST00000516364 107 ntBASIC-1.11□□□□□ -2.59
CPSF4O95639 RNU6-184P-201ENST00000516514 107 ntBASIC-1.11□□□□□ -2.59
CPSF4O95639 U7.3-201ENST00000616123 62 ntBASIC-1.11□□□□□ -2.59
CPSF4O95639 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.12□□□□□ -2.59
CPSF4O95639 RNU6-340P-201ENST00000364005 107 ntBASIC-1.12□□□□□ -2.59
CPSF4O95639 SNORD114-3-201ENST00000364969 75 ntBASIC-1.12□□□□□ -2.59
CPSF4O95639 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.12□□□□□ -2.59
CPSF4O95639 MIR5591-201ENST00000578248 65 ntBASIC-1.12□□□□□ -2.59
CPSF4O95639 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
CPSF4O95639 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.13□□□□□ -2.59
CPSF4O95639 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.13□□□□□ -2.59
CPSF4O95639 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.13□□□□□ -2.59
CPSF4O95639 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.13□□□□□ -2.59
CPSF4O95639 MIR6129-201ENST00000616087 109 ntBASIC-1.13□□□□□ -2.59
CPSF4O95639 SNORD115-27-201ENST00000364430 82 ntBASIC-1.14□□□□□ -2.59
CPSF4O95639 SNORD115-22-201ENST00000364456 82 ntBASIC-1.14□□□□□ -2.59
CPSF4O95639 RNU6-554P-201ENST00000410466 106 ntBASIC-1.14□□□□□ -2.59
CPSF4O95639 AL021921.1-201ENST00000442774 93 ntBASIC-1.14□□□□□ -2.59
CPSF4O95639 RNU6-794P-201ENST00000517261 64 ntBASIC-1.14□□□□□ -2.59
CPSF4O95639 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.14□□□□□ -2.59
CPSF4O95639 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.14□□□□□ -2.59
CPSF4O95639 RNU6-681P-201ENST00000364012 104 ntBASIC-1.15□□□□□ -2.59
CPSF4O95639 RNU6-106P-201ENST00000384405 107 ntBASIC-1.15□□□□□ -2.59
CPSF4O95639 MIR8485-201ENST00000401372 91 ntBASIC-1.15□□□□□ -2.59
CPSF4O95639 MIR4723-201ENST00000585070 81 ntBASIC-1.15□□□□□ -2.59
CPSF4O95639 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.16□□□□□ -2.6
CPSF4O95639 MIR519C-201ENST00000385053 87 ntBASIC-1.16□□□□□ -2.6
CPSF4O95639 SNORD77.2-201ENST00000391045 68 ntBASIC-1.16□□□□□ -2.6
CPSF4O95639 AL035461.1-201ENST00000421490 332 ntBASIC-1.16□□□□□ -2.6
CPSF4O95639 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.17□□□□□ -2.6
CPSF4O95639 SNORA19-201ENST00000384737 128 ntBASIC-1.17□□□□□ -2.6
CPSF4O95639 MIR29B1-201ENST00000385015 81 ntBASIC-1.17□□□□□ -2.6
CPSF4O95639 AL353691.2-201ENST00000443795 59 ntBASIC-1.17□□□□□ -2.6
CPSF4O95639 RNU6-656P-201ENST00000516785 107 ntBASIC-1.17□□□□□ -2.6
CPSF4O95639 MIR3133-201ENST00000583157 78 ntBASIC-1.17□□□□□ -2.6
CPSF4O95639 RNU6-704P-201ENST00000364162 103 ntBASIC-1.18□□□□□ -2.6
CPSF4O95639 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
CPSF4O95639 RNU6-479P-201ENST00000516348 105 ntBASIC-1.18□□□□□ -2.6
CPSF4O95639 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.18□□□□□ -2.6
CPSF4O95639 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.18□□□□□ -2.6
CPSF4O95639 MIR548AG1-201ENST00000579932 66 ntBASIC-1.18□□□□□ -2.6
CPSF4O95639 MIR6818-201ENST00000621576 65 ntBASIC-1.18□□□□□ -2.6
CPSF4O95639 AC132825.6-201ENST00000638861 357 ntBASIC-1.18□□□□□ -2.6
CPSF4O95639 RNY4P27-201ENST00000363341 96 ntBASIC-1.19□□□□□ -2.6
CPSF4O95639 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.19□□□□□ -2.6
CPSF4O95639 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.19□□□□□ -2.6
CPSF4O95639 snosnR66.1-201ENST00000391095 99 ntBASIC-1.19□□□□□ -2.6
CPSF4O95639 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.19□□□□□ -2.6
CPSF4O95639 RNU4-61P-201ENST00000411243 107 ntBASIC-1.19□□□□□ -2.6
CPSF4O95639 RNU7-134P-201ENST00000458997 64 ntBASIC-1.19□□□□□ -2.6
CPSF4O95639 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.19□□□□□ -2.6
CPSF4O95639 MIR4770-201ENST00000579149 58 ntBASIC-1.19□□□□□ -2.6
CPSF4O95639 U2.7-201ENST00000619197 100 ntBASIC-1.19□□□□□ -2.6
CPSF4O95639 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.19□□□□□ -2.6
CPSF4O95639 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.2□□□□□ -2.6
CPSF4O95639 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.2□□□□□ -2.6
CPSF4O95639 RNU6-540P-201ENST00000384622 101 ntBASIC-1.2□□□□□ -2.6
CPSF4O95639 RNU7-88P-201ENST00000458752 63 ntBASIC-1.2□□□□□ -2.6
CPSF4O95639 RNU6-732P-201ENST00000516033 103 ntBASIC-1.2□□□□□ -2.6
CPSF4O95639 RNU6-774P-201ENST00000363238 107 ntBASIC-1.21□□□□□ -2.6
CPSF4O95639 RNU6-959P-201ENST00000384671 107 ntBASIC-1.21□□□□□ -2.6
CPSF4O95639 MIR1207-201ENST00000408249 87 ntBASIC-1.21□□□□□ -2.6
CPSF4O95639 AC008267.6-201ENST00000441664 139 ntBASIC-1.21□□□□□ -2.6
CPSF4O95639 RNA5SP26-201ENST00000362406 119 ntBASIC-1.22□□□□□ -2.6
CPSF4O95639 RNU6-766P-201ENST00000362478 107 ntBASIC-1.22□□□□□ -2.6
CPSF4O95639 RNU6-633P-201ENST00000362612 103 ntBASIC-1.22□□□□□ -2.6
CPSF4O95639 RNU6-246P-201ENST00000384702 107 ntBASIC-1.22□□□□□ -2.6
CPSF4O95639 MIR507-201ENST00000385234 94 ntBASIC-1.22□□□□□ -2.6
CPSF4O95639 RNU6-576P-201ENST00000390854 102 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 241.8 ms