Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIR1276-201ENST00000408707 83 ntBASIC1.15□□□□□ -2.23
ACTN4O43707 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
ACTN4O43707 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ACTN4O43707 MIR518A1-201ENST00000385068 85 ntBASIC1.14□□□□□ -2.23
ACTN4O43707 MIR760-201ENST00000390220 80 ntBASIC1.14□□□□□ -2.23
ACTN4O43707 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
ACTN4O43707 RNU4-54P-201ENST00000516428 129 ntBASIC1.14□□□□□ -2.23
ACTN4O43707 AL353803.5-201ENST00000599815 141 ntBASIC1.14□□□□□ -2.23
ACTN4O43707 RNU4-38P-201ENST00000364472 129 ntBASIC1.13□□□□□ -2.23
ACTN4O43707 snoU13.18-201ENST00000459483 104 ntBASIC1.13□□□□□ -2.23
ACTN4O43707 RNU6-848P-201ENST00000515948 107 ntBASIC1.13□□□□□ -2.23
ACTN4O43707 RNU6-617P-201ENST00000516147 107 ntBASIC1.13□□□□□ -2.23
ACTN4O43707 RNU6-473P-201ENST00000516164 107 ntBASIC1.13□□□□□ -2.23
ACTN4O43707 RNU6-1049P-201ENST00000516414 107 ntBASIC1.13□□□□□ -2.23
ACTN4O43707 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
ACTN4O43707 RNU6-598P-201ENST00000364017 105 ntBASIC1.12□□□□□ -2.23
ACTN4O43707 RNU7-160P-201ENST00000516660 62 ntBASIC1.12□□□□□ -2.23
ACTN4O43707 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
ACTN4O43707 RN7SL660P-201ENST00000614852 299 ntBASIC1.12□□□□□ -2.23
ACTN4O43707 MIR6755-201ENST00000619993 66 ntBASIC1.12□□□□□ -2.23
ACTN4O43707 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.11□□□□□ -2.23
ACTN4O43707 RNU7-151P-201ENST00000516930 53 ntBASIC1.11□□□□□ -2.23
ACTN4O43707 MIR4452-201ENST00000583004 71 ntBASIC1.11□□□□□ -2.23
ACTN4O43707 U2.18-201ENST00000622185 84 ntBASIC1.11□□□□□ -2.23
ACTN4O43707 RNA5SP220-201ENST00000516298 104 ntBASIC1.1□□□□□ -2.23
ACTN4O43707 RNA5SP102-201ENST00000516865 106 ntBASIC1.1□□□□□ -2.23
ACTN4O43707 RNU6-247P-201ENST00000362636 107 ntBASIC1.09□□□□□ -2.23
ACTN4O43707 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
ACTN4O43707 AP000676.1-201ENST00000533307 52 ntBASIC1.09□□□□□ -2.23
ACTN4O43707 Y_RNA.118-201ENST00000363300 101 ntBASIC1.08□□□□□ -2.24
ACTN4O43707 RNU6-42P-201ENST00000384165 107 ntBASIC1.08□□□□□ -2.24
ACTN4O43707 MIR545-201ENST00000385085 106 ntBASIC1.08□□□□□ -2.24
ACTN4O43707 RNU6-1206P-201ENST00000516339 103 ntBASIC1.08□□□□□ -2.24
ACTN4O43707 RNA5SP128-201ENST00000365305 116 ntBASIC1.07□□□□□ -2.24
ACTN4O43707 Y_RNA.355-201ENST00000365462 98 ntBASIC1.07□□□□□ -2.24
ACTN4O43707 AL590095.2-201ENST00000604136 117 ntBASIC1.07□□□□□ -2.24
ACTN4O43707 snoR1.1-201ENST00000628177 80 ntBASIC1.07□□□□□ -2.24
ACTN4O43707 Y_RNA.69-201ENST00000362885 109 ntBASIC1.06□□□□□ -2.24
ACTN4O43707 RNU6-110P-201ENST00000384508 104 ntBASIC1.06□□□□□ -2.24
ACTN4O43707 RNU6-995P-201ENST00000391244 107 ntBASIC1.06□□□□□ -2.24
ACTN4O43707 RNU7-129P-201ENST00000516128 62 ntBASIC1.06□□□□□ -2.24
ACTN4O43707 MIR4432-201ENST00000581823 84 ntBASIC1.06□□□□□ -2.24
ACTN4O43707 AC108676.2-201ENST00000605225 163 ntBASIC1.06□□□□□ -2.24
ACTN4O43707 MIR876-201ENST00000401147 81 ntBASIC1.05□□□□□ -2.24
ACTN4O43707 AC098934.3-201ENST00000430450 190 ntBASIC1.05□□□□□ -2.24
ACTN4O43707 MIR3925-201ENST00000584674 77 ntBASIC1.05□□□□□ -2.24
ACTN4O43707 MIR499B-201ENST00000636498 73 ntBASIC1.05□□□□□ -2.24
ACTN4O43707 RNU6-924P-201ENST00000362926 108 ntBASIC1.04□□□□□ -2.24
ACTN4O43707 SNORD115-23-201ENST00000364461 82 ntBASIC1.04□□□□□ -2.24
ACTN4O43707 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
ACTN4O43707 MIR548AA1-201ENST00000384971 97 ntBASIC1.03□□□□□ -2.24
ACTN4O43707 MIR329-2-201ENST00000385029 84 ntBASIC1.03□□□□□ -2.24
ACTN4O43707 RNU6-1262P-201ENST00000516217 96 ntBASIC1.03□□□□□ -2.24
ACTN4O43707 MIR6734-201ENST00000621166 68 ntBASIC1.02□□□□□ -2.25
ACTN4O43707 SNORD114-27-201ENST00000363766 70 ntBASIC1.01□□□□□ -2.25
ACTN4O43707 RNU6-696P-201ENST00000390834 107 ntBASIC1.01□□□□□ -2.25
ACTN4O43707 SCARNA11.2-201ENST00000517183 154 ntBASIC1.01□□□□□ -2.25
ACTN4O43707 RNU6-828P-201ENST00000364876 107 ntBASIC1□□□□□ -2.25
ACTN4O43707 MIR106A-201ENST00000384870 81 ntBASIC1□□□□□ -2.25
ACTN4O43707 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
ACTN4O43707 RPL39P28-201ENST00000465655 155 ntBASIC0.99□□□□□ -2.25
ACTN4O43707 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
ACTN4O43707 SNORD114-22-201ENST00000365423 72 ntBASIC0.98□□□□□ -2.25
ACTN4O43707 RNU6-863P-201ENST00000515989 104 ntBASIC0.98□□□□□ -2.25
ACTN4O43707 MIR7111-201ENST00000619751 72 ntBASIC0.98□□□□□ -2.25
ACTN4O43707 RNA5SP98-201ENST00000363158 137 ntBASIC0.97□□□□□ -2.25
ACTN4O43707 PSMC1P5-201ENST00000512850 177 ntBASIC0.97□□□□□ -2.25
ACTN4O43707 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
ACTN4O43707 MIR6767-201ENST00000637302 66 ntBASIC0.97□□□□□ -2.25
ACTN4O43707 Y_RNA.698-201ENST00000516798 118 ntBASIC0.96□□□□□ -2.26
ACTN4O43707 U7.5-201ENST00000517224 61 ntBASIC0.96□□□□□ -2.26
ACTN4O43707 MIR3973-201ENST00000579824 107 ntBASIC0.96□□□□□ -2.26
ACTN4O43707 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
ACTN4O43707 MIR96-201ENST00000362288 78 ntBASIC0.95□□□□□ -2.26
ACTN4O43707 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.95□□□□□ -2.26
ACTN4O43707 RNU6-1267P-201ENST00000410747 107 ntBASIC0.95□□□□□ -2.26
ACTN4O43707 RNU7-88P-201ENST00000458752 63 ntBASIC0.95□□□□□ -2.26
ACTN4O43707 RNU1-93P-201ENST00000364704 169 ntBASIC0.94□□□□□ -2.26
ACTN4O43707 MIR125B1-201ENST00000385236 88 ntBASIC0.94□□□□□ -2.26
ACTN4O43707 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.94□□□□□ -2.26
ACTN4O43707 AL451105.1-201ENST00000450005 189 ntBASIC0.94□□□□□ -2.26
ACTN4O43707 RNU6-1223P-201ENST00000517124 104 ntBASIC0.94□□□□□ -2.26
ACTN4O43707 MIR151B-201ENST00000584249 96 ntBASIC0.94□□□□□ -2.26
ACTN4O43707 MIR373-201ENST00000362273 69 ntBASIC0.93□□□□□ -2.26
ACTN4O43707 SNORD114-2-201ENST00000363953 78 ntBASIC0.93□□□□□ -2.26
ACTN4O43707 RNU6-1133P-201ENST00000410963 100 ntBASIC0.93□□□□□ -2.26
ACTN4O43707 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
ACTN4O43707 uc_338.36-201ENST00000622331 158 ntBASIC0.93□□□□□ -2.26
ACTN4O43707 MIR548AL-201ENST00000578416 97 ntBASIC0.92□□□□□ -2.26
ACTN4O43707 MIR6788-201ENST00000618842 66 ntBASIC0.92□□□□□ -2.26
ACTN4O43707 MIR6888-201ENST00000621977 67 ntBASIC0.92□□□□□ -2.26
ACTN4O43707 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
ACTN4O43707 SNORD44.1-201ENST00000363202 61 ntBASIC0.91□□□□□ -2.26
ACTN4O43707 SNORA62.4-201ENST00000365504 151 ntBASIC0.91□□□□□ -2.26
ACTN4O43707 SNORD57-201ENST00000448188 72 ntBASIC0.91□□□□□ -2.26
ACTN4O43707 AL391099.1-201ENST00000624635 187 ntBASIC0.91□□□□□ -2.26
ACTN4O43707 RNU6-945P-201ENST00000383947 107 ntBASIC0.9□□□□□ -2.27
ACTN4O43707 AC108740.1-201ENST00000498629 225 ntBASIC0.9□□□□□ -2.27
ACTN4O43707 MIR489-201ENST00000384923 84 ntBASIC0.89□□□□□ -2.27
ACTN4O43707 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 297.2 ms