Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU6-106P-201ENST00000384405 107 ntBASIC-1.44□□□□□ -2.64
CHMP2AO43633 MIR8485-201ENST00000401372 91 ntBASIC-1.44□□□□□ -2.64
CHMP2AO43633 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.44□□□□□ -2.64
CHMP2AO43633 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.44□□□□□ -2.64
CHMP2AO43633 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.44□□□□□ -2.64
CHMP2AO43633 RNU6-246P-201ENST00000384702 107 ntBASIC-1.45□□□□□ -2.64
CHMP2AO43633 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.45□□□□□ -2.64
CHMP2AO43633 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.45□□□□□ -2.64
CHMP2AO43633 U7.5-201ENST00000517224 61 ntBASIC-1.45□□□□□ -2.64
CHMP2AO43633 MIR1302-5-201ENST00000408164 150 ntBASIC-1.46□□□□□ -2.64
CHMP2AO43633 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.46□□□□□ -2.64
CHMP2AO43633 MIR6818-201ENST00000621576 65 ntBASIC-1.46□□□□□ -2.64
CHMP2AO43633 RNA5SP26-201ENST00000362406 119 ntBASIC-1.47□□□□□ -2.64
CHMP2AO43633 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.47□□□□□ -2.64
CHMP2AO43633 MIR507-201ENST00000385234 94 ntBASIC-1.47□□□□□ -2.64
CHMP2AO43633 SNORD19-201ENST00000391191 68 ntBASIC-1.47□□□□□ -2.64
CHMP2AO43633 MIR3133-201ENST00000583157 78 ntBASIC-1.47□□□□□ -2.64
CHMP2AO43633 U2.7-201ENST00000619197 100 ntBASIC-1.47□□□□□ -2.64
CHMP2AO43633 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.48□□□□□ -2.65
CHMP2AO43633 RNU6-732P-201ENST00000516033 103 ntBASIC-1.48□□□□□ -2.65
CHMP2AO43633 RNU6-752P-201ENST00000516376 102 ntBASIC-1.48□□□□□ -2.65
CHMP2AO43633 MIR6129-201ENST00000616087 109 ntBASIC-1.48□□□□□ -2.65
CHMP2AO43633 SNORD77.2-201ENST00000391045 68 ntBASIC-1.49□□□□□ -2.65
CHMP2AO43633 AL021921.1-201ENST00000442774 93 ntBASIC-1.49□□□□□ -2.65
CHMP2AO43633 RNU6-479P-201ENST00000516348 105 ntBASIC-1.49□□□□□ -2.65
CHMP2AO43633 RNU6-330P-201ENST00000363015 107 ntBASIC-1.5□□□□□ -2.65
CHMP2AO43633 MIR519C-201ENST00000385053 87 ntBASIC-1.5□□□□□ -2.65
CHMP2AO43633 RNU4-61P-201ENST00000411243 107 ntBASIC-1.5□□□□□ -2.65
CHMP2AO43633 RPL35AP4-201ENST00000412007 102 ntBASIC-1.5□□□□□ -2.65
CHMP2AO43633 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.51□□□□□ -2.65
CHMP2AO43633 MIR548C-201ENST00000384815 97 ntBASIC-1.51□□□□□ -2.65
CHMP2AO43633 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
CHMP2AO43633 AL353691.2-201ENST00000443795 59 ntBASIC-1.51□□□□□ -2.65
CHMP2AO43633 AL365222.1-201ENST00000614661 98 ntBASIC-1.52□□□□□ -2.65
CHMP2AO43633 MIR409-201ENST00000362237 79 ntBASIC-1.53□□□□□ -2.65
CHMP2AO43633 RNU6-645P-201ENST00000364649 106 ntBASIC-1.53□□□□□ -2.65
CHMP2AO43633 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.54□□□□□ -2.66
CHMP2AO43633 MIR29B1-201ENST00000385015 81 ntBASIC-1.54□□□□□ -2.66
CHMP2AO43633 AC132825.6-201ENST00000638861 357 ntBASIC-1.54□□□□□ -2.66
CHMP2AO43633 MIR889-201ENST00000401280 79 ntBASIC-1.55□□□□□ -2.66
CHMP2AO43633 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.55□□□□□ -2.66
CHMP2AO43633 MIR4306-201ENST00000583390 91 ntBASIC-1.55□□□□□ -2.66
CHMP2AO43633 MIR4324-201ENST00000584846 72 ntBASIC-1.55□□□□□ -2.66
CHMP2AO43633 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.55□□□□□ -2.66
CHMP2AO43633 MIR6874-201ENST00000635894 71 ntBASIC-1.55□□□□□ -2.66
CHMP2AO43633 MIR5683-201ENST00000636514 76 ntBASIC-1.55□□□□□ -2.66
CHMP2AO43633 RNU6-681P-201ENST00000364012 104 ntBASIC-1.56□□□□□ -2.66
CHMP2AO43633 RNU6-704P-201ENST00000364162 103 ntBASIC-1.56□□□□□ -2.66
CHMP2AO43633 MTATP8P2-201ENST00000435212 202 ntBASIC-1.56□□□□□ -2.66
CHMP2AO43633 MIR4668-201ENST00000582284 70 ntBASIC-1.56□□□□□ -2.66
CHMP2AO43633 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.57□□□□□ -2.66
CHMP2AO43633 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.57□□□□□ -2.66
CHMP2AO43633 RNU6-633P-201ENST00000362612 103 ntBASIC-1.58□□□□□ -2.66
CHMP2AO43633 RNU6-24P-201ENST00000384440 107 ntBASIC-1.58□□□□□ -2.66
CHMP2AO43633 RNU6-959P-201ENST00000384671 107 ntBASIC-1.58□□□□□ -2.66
CHMP2AO43633 MIR527-201ENST00000385244 85 ntBASIC-1.58□□□□□ -2.66
CHMP2AO43633 RNU6-576P-201ENST00000390854 102 ntBASIC-1.58□□□□□ -2.66
CHMP2AO43633 RNU6-982P-201ENST00000516216 102 ntBASIC-1.58□□□□□ -2.66
CHMP2AO43633 RNU6-267P-201ENST00000516714 103 ntBASIC-1.58□□□□□ -2.66
CHMP2AO43633 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.58□□□□□ -2.66
CHMP2AO43633 AC091912.2-201ENST00000624798 167 ntBASIC-1.58□□□□□ -2.66
CHMP2AO43633 RNU6-766P-201ENST00000362478 107 ntBASIC-1.59□□□□□ -2.66
CHMP2AO43633 RNU6-478P-201ENST00000363904 110 ntBASIC-1.59□□□□□ -2.66
CHMP2AO43633 RNU6-807P-201ENST00000516805 107 ntBASIC-1.59□□□□□ -2.66
CHMP2AO43633 MIR6738-201ENST00000619620 64 ntBASIC-1.59□□□□□ -2.66
CHMP2AO43633 MIR450A1-201ENST00000362262 91 ntBASIC-1.6□□□□□ -2.67
CHMP2AO43633 MIR548Q-201ENST00000408404 100 ntBASIC-1.6□□□□□ -2.67
CHMP2AO43633 RNU6-794P-201ENST00000517261 64 ntBASIC-1.6□□□□□ -2.67
CHMP2AO43633 RNU6-624P-201ENST00000363411 107 ntBASIC-1.61□□□□□ -2.67
CHMP2AO43633 RNU6-209P-201ENST00000384118 107 ntBASIC-1.61□□□□□ -2.67
CHMP2AO43633 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.61□□□□□ -2.67
CHMP2AO43633 RNA5SP67-201ENST00000516422 131 ntBASIC-1.61□□□□□ -2.67
CHMP2AO43633 RNU6-589P-201ENST00000516485 107 ntBASIC-1.61□□□□□ -2.67
CHMP2AO43633 SNORD115-37-201ENST00000363768 82 ntBASIC-1.62□□□□□ -2.67
CHMP2AO43633 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.62□□□□□ -2.67
CHMP2AO43633 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.62□□□□□ -2.67
CHMP2AO43633 RNU6-458P-201ENST00000384179 107 ntBASIC-1.62□□□□□ -2.67
CHMP2AO43633 RNU6-604P-201ENST00000390917 100 ntBASIC-1.62□□□□□ -2.67
CHMP2AO43633 snosnR66.1-201ENST00000391095 99 ntBASIC-1.62□□□□□ -2.67
CHMP2AO43633 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.62□□□□□ -2.67
CHMP2AO43633 AC090616.4-201ENST00000448026 115 ntBASIC-1.62□□□□□ -2.67
CHMP2AO43633 U6.58-201ENST00000613107 107 ntBASIC-1.62□□□□□ -2.67
CHMP2AO43633 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.62□□□□□ -2.67
CHMP2AO43633 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.63□□□□□ -2.67
CHMP2AO43633 RNU6-402P-201ENST00000410678 103 ntBASIC-1.63□□□□□ -2.67
CHMP2AO43633 AC093729.1-201ENST00000513074 128 ntBASIC-1.63□□□□□ -2.67
CHMP2AO43633 RNU7-174P-201ENST00000516248 59 ntBASIC-1.63□□□□□ -2.67
CHMP2AO43633 MIR4490-201ENST00000582647 84 ntBASIC-1.63□□□□□ -2.67
CHMP2AO43633 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.64□□□□□ -2.67
CHMP2AO43633 RNU6-219P-201ENST00000364728 107 ntBASIC-1.64□□□□□ -2.67
CHMP2AO43633 SNORA8.1-201ENST00000384250 140 ntBASIC-1.64□□□□□ -2.67
CHMP2AO43633 AC008267.6-201ENST00000441664 139 ntBASIC-1.64□□□□□ -2.67
CHMP2AO43633 RNU6-164P-201ENST00000364604 103 ntBASIC-1.65□□□□□ -2.67
CHMP2AO43633 AL078595.1-201ENST00000404458 226 ntBASIC-1.65□□□□□ -2.67
CHMP2AO43633 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.65□□□□□ -2.67
CHMP2AO43633 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.65□□□□□ -2.67
CHMP2AO43633 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.66□□□□□ -2.68
CHMP2AO43633 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.66□□□□□ -2.68
CHMP2AO43633 MIR3675-201ENST00000583661 73 ntBASIC-1.66□□□□□ -2.68
CHMP2AO43633 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 228.3 ms