Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 RNU6-887P-201ENST00000410660 100 ntBASIC-1.39□□□□□ -2.63
CLDN5O00501 RNU6-479P-201ENST00000516348 105 ntBASIC-1.39□□□□□ -2.63
CLDN5O00501 RNU6-659P-201ENST00000516454 104 ntBASIC-1.39□□□□□ -2.63
CLDN5O00501 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.39□□□□□ -2.63
CLDN5O00501 RNU6-824P-201ENST00000363724 104 ntBASIC-1.4□□□□□ -2.63
CLDN5O00501 RNY1P5-201ENST00000383890 115 ntBASIC-1.4□□□□□ -2.63
CLDN5O00501 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.4□□□□□ -2.63
CLDN5O00501 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.4□□□□□ -2.63
CLDN5O00501 RNU6-412P-201ENST00000516434 106 ntBASIC-1.4□□□□□ -2.63
CLDN5O00501 SNORD114-17-201ENST00000364699 75 ntBASIC-1.41□□□□□ -2.64
CLDN5O00501 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.41□□□□□ -2.64
CLDN5O00501 RNU6-907P-201ENST00000390924 102 ntBASIC-1.41□□□□□ -2.64
CLDN5O00501 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.42□□□□□ -2.64
CLDN5O00501 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.42□□□□□ -2.64
CLDN5O00501 SNORA33.1-201ENST00000364957 130 ntBASIC-1.42□□□□□ -2.64
CLDN5O00501 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.42□□□□□ -2.64
CLDN5O00501 AL691482.2-201ENST00000457453 84 ntBASIC-1.42□□□□□ -2.64
CLDN5O00501 RNU6-904P-201ENST00000516206 101 ntBASIC-1.42□□□□□ -2.64
CLDN5O00501 AC090425.1-201ENST00000610007 140 ntBASIC-1.42□□□□□ -2.64
CLDN5O00501 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.43□□□□□ -2.64
CLDN5O00501 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.43□□□□□ -2.64
CLDN5O00501 SNORD116-21-201ENST00000384507 92 ntBASIC-1.43□□□□□ -2.64
CLDN5O00501 MIR3657-201ENST00000584818 117 ntBASIC-1.43□□□□□ -2.64
CLDN5O00501 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.44□□□□□ -2.64
CLDN5O00501 SNORA2.1-201ENST00000363089 137 ntBASIC-1.44□□□□□ -2.64
CLDN5O00501 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.44□□□□□ -2.64
CLDN5O00501 MIR1255B2-201ENST00000408618 67 ntBASIC-1.44□□□□□ -2.64
CLDN5O00501 snoU83B.1-201ENST00000517136 88 ntBASIC-1.44□□□□□ -2.64
CLDN5O00501 MIR6502-201ENST00000617296 76 ntBASIC-1.44□□□□□ -2.64
CLDN5O00501 AC091912.2-201ENST00000624798 167 ntBASIC-1.44□□□□□ -2.64
CLDN5O00501 SNORD116-10-201ENST00000363791 102 ntBASIC-1.45□□□□□ -2.64
CLDN5O00501 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.45□□□□□ -2.64
CLDN5O00501 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.45□□□□□ -2.64
CLDN5O00501 RNA5SP86-201ENST00000390869 98 ntBASIC-1.45□□□□□ -2.64
CLDN5O00501 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.45□□□□□ -2.64
CLDN5O00501 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.45□□□□□ -2.64
CLDN5O00501 SNORD54-201ENST00000459159 67 ntBASIC-1.45□□□□□ -2.64
CLDN5O00501 MIR4796-201ENST00000580742 81 ntBASIC-1.45□□□□□ -2.64
CLDN5O00501 MIR4464-201ENST00000580818 92 ntBASIC-1.45□□□□□ -2.64
CLDN5O00501 RNU6-228P-201ENST00000362700 106 ntBASIC-1.46□□□□□ -2.64
CLDN5O00501 RNU6-980P-201ENST00000516925 103 ntBASIC-1.46□□□□□ -2.64
CLDN5O00501 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.46□□□□□ -2.64
CLDN5O00501 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.47□□□□□ -2.64
CLDN5O00501 MIR6888-201ENST00000621977 67 ntBASIC-1.47□□□□□ -2.64
CLDN5O00501 CYP3A54P-201ENST00000566950 75 ntBASIC-1.48□□□□□ -2.65
CLDN5O00501 RNU7-61P-201ENST00000515897 61 ntBASIC-1.49□□□□□ -2.65
CLDN5O00501 U6.81-201ENST00000612550 106 ntBASIC-1.49□□□□□ -2.65
CLDN5O00501 SNORD116-14-201ENST00000383894 92 ntBASIC-1.5□□□□□ -2.65
CLDN5O00501 SNORD116-17-201ENST00000383929 92 ntBASIC-1.5□□□□□ -2.65
CLDN5O00501 SNORD116-15-201ENST00000384445 92 ntBASIC-1.5□□□□□ -2.65
CLDN5O00501 SNORD116-19-201ENST00000384729 92 ntBASIC-1.5□□□□□ -2.65
CLDN5O00501 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.5□□□□□ -2.65
CLDN5O00501 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.51□□□□□ -2.65
CLDN5O00501 MIR1236-201ENST00000408340 102 ntBASIC-1.51□□□□□ -2.65
CLDN5O00501 MIR548H1-201ENST00000408610 102 ntBASIC-1.51□□□□□ -2.65
CLDN5O00501 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.51□□□□□ -2.65
CLDN5O00501 MIR527-201ENST00000385244 85 ntBASIC-1.52□□□□□ -2.65
CLDN5O00501 MIR1302-5-201ENST00000408164 150 ntBASIC-1.52□□□□□ -2.65
CLDN5O00501 RNY4-201ENST00000516507 96 ntBASIC-1.52□□□□□ -2.65
CLDN5O00501 RNU6-704P-201ENST00000364162 103 ntBASIC-1.53□□□□□ -2.65
CLDN5O00501 MIR590-201ENST00000385008 97 ntBASIC-1.53□□□□□ -2.65
CLDN5O00501 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.53□□□□□ -2.65
CLDN5O00501 RNU6-537P-201ENST00000517277 103 ntBASIC-1.53□□□□□ -2.65
CLDN5O00501 MIR3139-201ENST00000579145 76 ntBASIC-1.53□□□□□ -2.65
CLDN5O00501 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.54□□□□□ -2.66
CLDN5O00501 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.54□□□□□ -2.66
CLDN5O00501 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.54□□□□□ -2.66
CLDN5O00501 RNU6-924P-201ENST00000362926 108 ntBASIC-1.55□□□□□ -2.66
CLDN5O00501 AL450471.1-201ENST00000447509 127 ntBASIC-1.55□□□□□ -2.66
CLDN5O00501 RNU6-162P-201ENST00000516228 103 ntBASIC-1.55□□□□□ -2.66
CLDN5O00501 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.56□□□□□ -2.66
CLDN5O00501 MIR521-2-201ENST00000384818 87 ntBASIC-1.56□□□□□ -2.66
CLDN5O00501 MIR487B-201ENST00000385021 84 ntBASIC-1.57□□□□□ -2.66
CLDN5O00501 RNU7-153P-201ENST00000516455 62 ntBASIC-1.57□□□□□ -2.66
CLDN5O00501 MIR4756-201ENST00000577874 78 ntBASIC-1.57□□□□□ -2.66
CLDN5O00501 AC108019.1-201ENST00000512540 175 ntBASIC-1.58□□□□□ -2.66
CLDN5O00501 MT-TM-201ENST00000387377 68 ntBASIC-1.59□□□□□ -2.66
CLDN5O00501 snosnR66.1-201ENST00000391095 99 ntBASIC-1.59□□□□□ -2.66
CLDN5O00501 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.59□□□□□ -2.66
CLDN5O00501 RNU6-752P-201ENST00000516376 102 ntBASIC-1.59□□□□□ -2.66
CLDN5O00501 U7.3-201ENST00000616123 62 ntBASIC-1.59□□□□□ -2.66
CLDN5O00501 RNU7-154P-201ENST00000516194 62 ntBASIC-1.6□□□□□ -2.67
CLDN5O00501 RNU6-109P-201ENST00000516364 107 ntBASIC-1.6□□□□□ -2.67
CLDN5O00501 RNU6-184P-201ENST00000516514 107 ntBASIC-1.6□□□□□ -2.67
CLDN5O00501 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.6□□□□□ -2.67
CLDN5O00501 RNU6-794P-201ENST00000517261 64 ntBASIC-1.6□□□□□ -2.67
CLDN5O00501 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.6□□□□□ -2.67
CLDN5O00501 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.61□□□□□ -2.67
CLDN5O00501 RNU6-518P-201ENST00000516056 96 ntBASIC-1.61□□□□□ -2.67
CLDN5O00501 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.62□□□□□ -2.67
CLDN5O00501 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.62□□□□□ -2.67
CLDN5O00501 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.62□□□□□ -2.67
CLDN5O00501 MIR6739-201ENST00000622461 75 ntBASIC-1.62□□□□□ -2.67
CLDN5O00501 MIR664B-201ENST00000626756 61 ntBASIC-1.62□□□□□ -2.67
CLDN5O00501 MIR519A2-201ENST00000384990 87 ntBASIC-1.63□□□□□ -2.67
CLDN5O00501 RNU6-554P-201ENST00000410466 106 ntBASIC-1.63□□□□□ -2.67
CLDN5O00501 RNU2-51P-201ENST00000410708 197 ntBASIC-1.63□□□□□ -2.67
CLDN5O00501 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.63□□□□□ -2.67
CLDN5O00501 MIR3133-201ENST00000583157 78 ntBASIC-1.63□□□□□ -2.67
CLDN5O00501 RNU6-681P-201ENST00000364012 104 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms