Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.63□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.63□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-330P-201ENST00000363015 107 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 SNORD114-15-201ENST00000364687 72 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-497P-201ENST00000365316 104 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-147P-201ENST00000383983 107 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 SNORD77.2-201ENST00000391045 68 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 AL035461.1-201ENST00000421490 332 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 AC021146.6-201ENST00000514659 117 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-881P-201ENST00000516813 102 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 MIR548AG1-201ENST00000579932 66 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 SNORD114-25-201ENST00000363742 72 ntBASIC-0.65□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-755P-201ENST00000364400 103 ntBASIC-0.65□□□□□ -2.51
TRAV40A0A0B4J280 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.65□□□□□ -2.51
TRAV40A0A0B4J280 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.65□□□□□ -2.51
TRAV40A0A0B4J280 AL445584.3-201ENST00000617173 78 ntBASIC-0.65□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-215P-201ENST00000365169 102 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 MIR521-2-201ENST00000384818 87 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 MIR224-201ENST00000384889 81 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 AL603908.1-201ENST00000406098 201 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 SNORD18.2-201ENST00000459604 70 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 SNORA40.13-201ENST00000516379 120 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 AC140658.3-201ENST00000567603 271 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 MIR548BB-201ENST00000626714 66 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-624P-201ENST00000363411 107 ntBASIC-0.67□□□□□ -2.52
TRAV40A0A0B4J280 MIR519A2-201ENST00000384990 87 ntBASIC-0.67□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.67□□□□□ -2.52
TRAV40A0A0B4J280 AC093729.1-201ENST00000513074 128 ntBASIC-0.67□□□□□ -2.52
TRAV40A0A0B4J280 MIR6739-201ENST00000622461 75 ntBASIC-0.67□□□□□ -2.52
TRAV40A0A0B4J280 SNORD74.6-201ENST00000364796 70 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-44P-201ENST00000384045 107 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 SNORD116-22-201ENST00000384430 92 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 SNORA13-201ENST00000458790 133 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 snoU13.19-201ENST00000459148 104 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-656P-201ENST00000516785 107 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 MIR2052-201ENST00000636055 55 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-478P-201ENST00000363904 110 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 SNORD114-17-201ENST00000364699 75 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-431P-201ENST00000383874 107 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 AL500527.2-201ENST00000454105 95 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 MIR3681-201ENST00000580089 72 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 SNORA62.4-201ENST00000365504 151 ntBASIC-0.7□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.7□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.7□□□□□ -2.52
TRAV40A0A0B4J280 SNORD115-37-201ENST00000363768 82 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-49P-201ENST00000384256 107 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-30P-201ENST00000384561 107 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 SNORD64-201ENST00000386683 67 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 MT-TQ-201ENST00000387372 72 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-518P-201ENST00000516056 96 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-752P-201ENST00000516376 102 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-32P-201ENST00000383948 107 ntBASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-13P-201ENST00000384248 107 ntBASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-12P-201ENST00000384604 107 ntBASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-41P-201ENST00000384741 107 ntBASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-919P-201ENST00000516731 104 ntBASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 RNA5SP470-201ENST00000516463 106 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-406P-201ENST00000516470 107 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 U2.7-201ENST00000619197 100 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-681P-201ENST00000364012 104 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 MIR196A1-201ENST00000388006 70 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-982P-201ENST00000516216 102 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 MIR4484-201ENST00000582855 83 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 U2.22-201ENST00000636441 106 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 AC006160.2-201ENST00000637708 154 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-645P-201ENST00000364649 106 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-675P-201ENST00000384236 104 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 RNA5SP89-201ENST00000410300 108 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 RNU4-61P-201ENST00000411243 107 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-844P-201ENST00000517175 102 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 MIR548AX-201ENST00000580117 73 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.76□□□□□ -2.53
TRAV40A0A0B4J280 MIR147A-201ENST00000385079 72 ntBASIC-0.76□□□□□ -2.53
TRAV40A0A0B4J280 RNU4-63P-201ENST00000411313 118 ntBASIC-0.76□□□□□ -2.53
TRAV40A0A0B4J280 RNU7-154P-201ENST00000516194 62 ntBASIC-0.76□□□□□ -2.53
TRAV40A0A0B4J280 SNORD115-22-201ENST00000364456 82 ntBASIC-0.77□□□□□ -2.53
TRAV40A0A0B4J280 SNORA8.1-201ENST00000384250 140 ntBASIC-0.77□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.77□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-604P-201ENST00000390917 100 ntBASIC-0.77□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-168P-201ENST00000516189 101 ntBASIC-0.77□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-557P-201ENST00000516842 110 ntBASIC-0.77□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-686P-201ENST00000364839 107 ntBASIC-0.78□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-246P-201ENST00000384702 107 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms