Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.63□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.63□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-330P-201ENST00000363015 107 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 SNORD114-15-201ENST00000364687 72 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-497P-201ENST00000365316 104 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-147P-201ENST00000383983 107 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 SNORD77.2-201ENST00000391045 68 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 AL035461.1-201ENST00000421490 332 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 AC021146.6-201ENST00000514659 117 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-881P-201ENST00000516813 102 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 MIR548AG1-201ENST00000579932 66 ntBASIC-0.64□□□□□ -2.51
TRAV40A0A0B4J280 SNORD114-25-201ENST00000363742 72 ntBASIC-0.65□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-755P-201ENST00000364400 103 ntBASIC-0.65□□□□□ -2.51
TRAV40A0A0B4J280 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.65□□□□□ -2.51
TRAV40A0A0B4J280 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.65□□□□□ -2.51
TRAV40A0A0B4J280 AL445584.3-201ENST00000617173 78 ntBASIC-0.65□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-215P-201ENST00000365169 102 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 MIR521-2-201ENST00000384818 87 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 MIR224-201ENST00000384889 81 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 AL603908.1-201ENST00000406098 201 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 SNORD18.2-201ENST00000459604 70 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 SNORA40.13-201ENST00000516379 120 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 AC140658.3-201ENST00000567603 271 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 MIR548BB-201ENST00000626714 66 ntBASIC-0.66□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-624P-201ENST00000363411 107 ntBASIC-0.67□□□□□ -2.52
TRAV40A0A0B4J280 MIR519A2-201ENST00000384990 87 ntBASIC-0.67□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.67□□□□□ -2.52
TRAV40A0A0B4J280 AC093729.1-201ENST00000513074 128 ntBASIC-0.67□□□□□ -2.52
TRAV40A0A0B4J280 MIR6739-201ENST00000622461 75 ntBASIC-0.67□□□□□ -2.52
TRAV40A0A0B4J280 SNORD74.6-201ENST00000364796 70 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-44P-201ENST00000384045 107 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 SNORD116-22-201ENST00000384430 92 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 SNORA13-201ENST00000458790 133 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 snoU13.19-201ENST00000459148 104 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-656P-201ENST00000516785 107 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 MIR2052-201ENST00000636055 55 ntBASIC-0.68□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-478P-201ENST00000363904 110 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 SNORD114-17-201ENST00000364699 75 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-431P-201ENST00000383874 107 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 AL500527.2-201ENST00000454105 95 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 MIR3681-201ENST00000580089 72 ntBASIC-0.69□□□□□ -2.52
TRAV40A0A0B4J280 SNORA62.4-201ENST00000365504 151 ntBASIC-0.7□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.7□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.7□□□□□ -2.52
TRAV40A0A0B4J280 SNORD115-37-201ENST00000363768 82 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-49P-201ENST00000384256 107 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-30P-201ENST00000384561 107 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 SNORD64-201ENST00000386683 67 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 MT-TQ-201ENST00000387372 72 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-518P-201ENST00000516056 96 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-752P-201ENST00000516376 102 ntBASIC-0.71□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-32P-201ENST00000383948 107 ntBASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-13P-201ENST00000384248 107 ntBASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-12P-201ENST00000384604 107 ntBASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-41P-201ENST00000384741 107 ntBASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 RNU6-919P-201ENST00000516731 104 ntBASIC-0.72□□□□□ -2.52
TRAV40A0A0B4J280 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 RNA5SP470-201ENST00000516463 106 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-406P-201ENST00000516470 107 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 U2.7-201ENST00000619197 100 ntBASIC-0.73□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-681P-201ENST00000364012 104 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 MIR196A1-201ENST00000388006 70 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-982P-201ENST00000516216 102 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 MIR4484-201ENST00000582855 83 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 U2.22-201ENST00000636441 106 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 AC006160.2-201ENST00000637708 154 ntBASIC-0.74□□□□□ -2.53
TRAV40A0A0B4J280 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-645P-201ENST00000364649 106 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-675P-201ENST00000384236 104 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 RNA5SP89-201ENST00000410300 108 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 RNU4-61P-201ENST00000411243 107 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-844P-201ENST00000517175 102 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 MIR548AX-201ENST00000580117 73 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.75□□□□□ -2.53
TRAV40A0A0B4J280 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.76□□□□□ -2.53
TRAV40A0A0B4J280 MIR147A-201ENST00000385079 72 ntBASIC-0.76□□□□□ -2.53
TRAV40A0A0B4J280 RNU4-63P-201ENST00000411313 118 ntBASIC-0.76□□□□□ -2.53
TRAV40A0A0B4J280 RNU7-154P-201ENST00000516194 62 ntBASIC-0.76□□□□□ -2.53
TRAV40A0A0B4J280 SNORD115-22-201ENST00000364456 82 ntBASIC-0.77□□□□□ -2.53
TRAV40A0A0B4J280 SNORA8.1-201ENST00000384250 140 ntBASIC-0.77□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.77□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-604P-201ENST00000390917 100 ntBASIC-0.77□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-168P-201ENST00000516189 101 ntBASIC-0.77□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-557P-201ENST00000516842 110 ntBASIC-0.77□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-686P-201ENST00000364839 107 ntBASIC-0.78□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-246P-201ENST00000384702 107 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms