Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 SNORA70.25-201ENST00000612741 95 ntBASIC0.89□□□□□ -2.27
PCDHA11Q9Y5I1 AC092634.7-201ENST00000621022 103 ntBASIC0.89□□□□□ -2.27
PCDHA11Q9Y5I1 MIR6739-201ENST00000622461 75 ntBASIC0.89□□□□□ -2.27
PCDHA11Q9Y5I1 Y_RNA.68-201ENST00000362881 102 ntBASIC0.88□□□□□ -2.27
PCDHA11Q9Y5I1 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
PCDHA11Q9Y5I1 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
PCDHA11Q9Y5I1 SCARNA17.3-201ENST00000516381 125 ntBASIC0.88□□□□□ -2.27
PCDHA11Q9Y5I1 MIR548AE1-201ENST00000583292 70 ntBASIC0.88□□□□□ -2.27
PCDHA11Q9Y5I1 MIR4473-201ENST00000583731 91 ntBASIC0.88□□□□□ -2.27
PCDHA11Q9Y5I1 RNU6-668P-201ENST00000364180 107 ntBASIC0.87□□□□□ -2.27
PCDHA11Q9Y5I1 MIR652-201ENST00000385278 98 ntBASIC0.87□□□□□ -2.27
PCDHA11Q9Y5I1 RNU1-29P-201ENST00000606574 126 ntBASIC0.87□□□□□ -2.27
PCDHA11Q9Y5I1 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
PCDHA11Q9Y5I1 MIR5706-201ENST00000579841 80 ntBASIC0.86□□□□□ -2.27
PCDHA11Q9Y5I1 SNORA25.18-201ENST00000607153 114 ntBASIC0.86□□□□□ -2.27
PCDHA11Q9Y5I1 SNORD118-201ENST00000363593 134 ntBASIC0.85□□□□□ -2.27
PCDHA11Q9Y5I1 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
PCDHA11Q9Y5I1 MIR508-201ENST00000384857 115 ntBASIC0.85□□□□□ -2.27
PCDHA11Q9Y5I1 AC069271.1-201ENST00000445577 156 ntBASIC0.85□□□□□ -2.27
PCDHA11Q9Y5I1 RNU6-656P-201ENST00000516785 107 ntBASIC0.85□□□□□ -2.27
PCDHA11Q9Y5I1 MIR4511-201ENST00000582784 87 ntBASIC0.85□□□□□ -2.27
PCDHA11Q9Y5I1 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
PCDHA11Q9Y5I1 AL109933.3-201ENST00000619095 188 ntBASIC0.85□□□□□ -2.27
PCDHA11Q9Y5I1 SNORA40.8-201ENST00000411034 126 ntBASIC0.84□□□□□ -2.27
PCDHA11Q9Y5I1 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
PCDHA11Q9Y5I1 AC103706.3-201ENST00000636297 85 ntBASIC0.84□□□□□ -2.27
PCDHA11Q9Y5I1 RNA5SP193-201ENST00000410353 107 ntBASIC0.83□□□□□ -2.28
PCDHA11Q9Y5I1 HMGN2P22-201ENST00000427588 175 ntBASIC0.83□□□□□ -2.28
PCDHA11Q9Y5I1 AC021146.9-201ENST00000512503 156 ntBASIC0.83□□□□□ -2.28
PCDHA11Q9Y5I1 MIR4711-201ENST00000578274 70 ntBASIC0.83□□□□□ -2.28
PCDHA11Q9Y5I1 RNU6-1162P-201ENST00000384443 104 ntBASIC0.82□□□□□ -2.28
PCDHA11Q9Y5I1 SNORD71-201ENST00000411292 86 ntBASIC0.82□□□□□ -2.28
PCDHA11Q9Y5I1 snoU13.13-201ENST00000458842 104 ntBASIC0.82□□□□□ -2.28
PCDHA11Q9Y5I1 MIR8087-201ENST00000612745 78 ntBASIC0.82□□□□□ -2.28
PCDHA11Q9Y5I1 uc_338.10-201ENST00000621872 182 ntBASIC0.82□□□□□ -2.28
PCDHA11Q9Y5I1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.82□□□□□ -2.28
PCDHA11Q9Y5I1 RNA5SP257-201ENST00000363023 116 ntBASIC0.81□□□□□ -2.28
PCDHA11Q9Y5I1 SNORA63.6-201ENST00000364921 119 ntBASIC0.81□□□□□ -2.28
PCDHA11Q9Y5I1 Y_RNA.375-201ENST00000365625 101 ntBASIC0.81□□□□□ -2.28
PCDHA11Q9Y5I1 MIR582-201ENST00000365731 98 ntBASIC0.81□□□□□ -2.28
PCDHA11Q9Y5I1 Y_RNA.433-201ENST00000384089 102 ntBASIC0.81□□□□□ -2.28
PCDHA11Q9Y5I1 MIR521-2-201ENST00000384818 87 ntBASIC0.81□□□□□ -2.28
PCDHA11Q9Y5I1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
PCDHA11Q9Y5I1 Y_RNA.633-201ENST00000459107 95 ntBASIC0.81□□□□□ -2.28
PCDHA11Q9Y5I1 RNA5SP121-201ENST00000516537 101 ntBASIC0.81□□□□□ -2.28
PCDHA11Q9Y5I1 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
PCDHA11Q9Y5I1 MIR330-201ENST00000362196 94 ntBASIC0.8□□□□□ -2.28
PCDHA11Q9Y5I1 Y_RNA.125-201ENST00000363371 111 ntBASIC0.8□□□□□ -2.28
PCDHA11Q9Y5I1 MIR518A1-201ENST00000385068 85 ntBASIC0.8□□□□□ -2.28
PCDHA11Q9Y5I1 MIR548E-201ENST00000408287 88 ntBASIC0.8□□□□□ -2.28
PCDHA11Q9Y5I1 RNA5SP347-201ENST00000362445 119 ntBASIC0.79□□□□□ -2.28
PCDHA11Q9Y5I1 SNORA15B-2-201ENST00000384058 135 ntBASIC0.79□□□□□ -2.28
PCDHA11Q9Y5I1 SNORA15B-1-201ENST00000384334 135 ntBASIC0.79□□□□□ -2.28
PCDHA11Q9Y5I1 SNORA2A-201ENST00000383885 135 ntBASIC0.78□□□□□ -2.28
PCDHA11Q9Y5I1 RNU6-542P-201ENST00000516405 103 ntBASIC0.78□□□□□ -2.28
PCDHA11Q9Y5I1 U7.6-201ENST00000610841 64 ntBASIC0.78□□□□□ -2.28
PCDHA11Q9Y5I1 RNA5SP215-201ENST00000363440 122 ntBASIC0.77□□□□□ -2.29
PCDHA11Q9Y5I1 AL157398.1-201ENST00000452981 186 ntBASIC0.77□□□□□ -2.29
PCDHA11Q9Y5I1 RNU6-1089P-201ENST00000516473 104 ntBASIC0.77□□□□□ -2.29
PCDHA11Q9Y5I1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
PCDHA11Q9Y5I1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
PCDHA11Q9Y5I1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
PCDHA11Q9Y5I1 MIR9-2-201ENST00000384838 87 ntBASIC0.76□□□□□ -2.29
PCDHA11Q9Y5I1 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
PCDHA11Q9Y5I1 RNU6-848P-201ENST00000515948 107 ntBASIC0.76□□□□□ -2.29
PCDHA11Q9Y5I1 RNU6-617P-201ENST00000516147 107 ntBASIC0.76□□□□□ -2.29
PCDHA11Q9Y5I1 RNU6-473P-201ENST00000516164 107 ntBASIC0.76□□□□□ -2.29
PCDHA11Q9Y5I1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.76□□□□□ -2.29
PCDHA11Q9Y5I1 RNU4-54P-201ENST00000516428 129 ntBASIC0.76□□□□□ -2.29
PCDHA11Q9Y5I1 RNU6-229P-201ENST00000516614 102 ntBASIC0.76□□□□□ -2.29
PCDHA11Q9Y5I1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.75□□□□□ -2.29
PCDHA11Q9Y5I1 AC098934.3-201ENST00000430450 190 ntBASIC0.75□□□□□ -2.29
PCDHA11Q9Y5I1 AC244090.1-201ENST00000441884 93 ntBASIC0.75□□□□□ -2.29
PCDHA11Q9Y5I1 MIR20A-201ENST00000362279 71 ntBASIC0.74□□□□□ -2.29
PCDHA11Q9Y5I1 SNORA33.1-201ENST00000364957 130 ntBASIC0.74□□□□□ -2.29
PCDHA11Q9Y5I1 MIR6755-201ENST00000619993 66 ntBASIC0.74□□□□□ -2.29
PCDHA11Q9Y5I1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
PCDHA11Q9Y5I1 RNU6-669P-201ENST00000365575 107 ntBASIC0.73□□□□□ -2.29
PCDHA11Q9Y5I1 AC110620.1-201ENST00000416042 228 ntBASIC0.73□□□□□ -2.29
PCDHA11Q9Y5I1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.73□□□□□ -2.29
PCDHA11Q9Y5I1 AC243829.3-201ENST00000622177 108 ntBASIC0.73□□□□□ -2.29
PCDHA11Q9Y5I1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.72□□□□□ -2.29
PCDHA11Q9Y5I1 RNA5SP299-201ENST00000391203 116 ntBASIC0.72□□□□□ -2.29
PCDHA11Q9Y5I1 SNORD114-29-201ENST00000364819 70 ntBASIC0.71□□□□□ -2.3
PCDHA11Q9Y5I1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
PCDHA11Q9Y5I1 MIR516B1-201ENST00000385211 90 ntBASIC0.7□□□□□ -2.3
PCDHA11Q9Y5I1 MIR501-201ENST00000390204 84 ntBASIC0.7□□□□□ -2.3
PCDHA11Q9Y5I1 MIR1197-201ENST00000408818 88 ntBASIC0.7□□□□□ -2.3
PCDHA11Q9Y5I1 RNU6-863P-201ENST00000515989 104 ntBASIC0.7□□□□□ -2.3
PCDHA11Q9Y5I1 SCARNA21.1-201ENST00000515996 128 ntBASIC0.7□□□□□ -2.3
PCDHA11Q9Y5I1 MIR4677-201ENST00000584153 80 ntBASIC0.7□□□□□ -2.3
PCDHA11Q9Y5I1 U2.7-201ENST00000619197 100 ntBASIC0.7□□□□□ -2.3
PCDHA11Q9Y5I1 RNA5SP62-201ENST00000363457 110 ntBASIC0.69□□□□□ -2.3
PCDHA11Q9Y5I1 RNU6-302P-201ENST00000365249 107 ntBASIC0.69□□□□□ -2.3
PCDHA11Q9Y5I1 MIR548C-201ENST00000384815 97 ntBASIC0.69□□□□□ -2.3
PCDHA11Q9Y5I1 MIR760-201ENST00000390220 80 ntBASIC0.69□□□□□ -2.3
PCDHA11Q9Y5I1 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
PCDHA11Q9Y5I1 SNORD2-201ENST00000459163 69 ntBASIC0.68□□□□□ -2.3
PCDHA11Q9Y5I1 RNU7-188P-201ENST00000517063 64 ntBASIC0.68□□□□□ -2.3
PCDHA11Q9Y5I1 MIR548AD-201ENST00000584780 82 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms