Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.79□□□□□ -2.12
HPS5Q9UPZ3 RNU6-518P-201ENST00000516056 96 ntBASIC1.79□□□□□ -2.12
HPS5Q9UPZ3 MIR4473-201ENST00000583731 91 ntBASIC1.79□□□□□ -2.12
HPS5Q9UPZ3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.79□□□□□ -2.12
HPS5Q9UPZ3 MIR573-201ENST00000384964 99 ntBASIC1.78□□□□□ -2.12
HPS5Q9UPZ3 SNORA31.24-201ENST00000517232 57 ntBASIC1.78□□□□□ -2.12
HPS5Q9UPZ3 MIR3612-201ENST00000579753 87 ntBASIC1.78□□□□□ -2.12
HPS5Q9UPZ3 MIR6788-201ENST00000618842 66 ntBASIC1.78□□□□□ -2.12
HPS5Q9UPZ3 AC090617.8-201ENST00000623339 167 ntBASIC1.78□□□□□ -2.12
HPS5Q9UPZ3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
HPS5Q9UPZ3 MIR516B1-201ENST00000385211 90 ntBASIC1.77□□□□□ -2.13
HPS5Q9UPZ3 MIR527-201ENST00000385244 85 ntBASIC1.77□□□□□ -2.13
HPS5Q9UPZ3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.76□□□□□ -2.13
HPS5Q9UPZ3 RNU6-838P-201ENST00000363399 108 ntBASIC1.76□□□□□ -2.13
HPS5Q9UPZ3 AC006210.1-201ENST00000424882 111 ntBASIC1.76□□□□□ -2.13
HPS5Q9UPZ3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.76□□□□□ -2.13
HPS5Q9UPZ3 RNU6-810P-201ENST00000364001 107 ntBASIC1.75□□□□□ -2.13
HPS5Q9UPZ3 MIR545-201ENST00000385085 106 ntBASIC1.75□□□□□ -2.13
HPS5Q9UPZ3 MIR548J-201ENST00000408833 112 ntBASIC1.75□□□□□ -2.13
HPS5Q9UPZ3 FABP5P4-201ENST00000437203 171 ntBASIC1.75□□□□□ -2.13
HPS5Q9UPZ3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.75□□□□□ -2.13
HPS5Q9UPZ3 MIR519A2-201ENST00000384990 87 ntBASIC1.74□□□□□ -2.13
HPS5Q9UPZ3 SNORD110-201ENST00000408189 75 ntBASIC1.74□□□□□ -2.13
HPS5Q9UPZ3 MIR1304-201ENST00000408243 91 ntBASIC1.74□□□□□ -2.13
HPS5Q9UPZ3 AC243829.3-201ENST00000622177 108 ntBASIC1.74□□□□□ -2.13
HPS5Q9UPZ3 RNU6-246P-201ENST00000384702 107 ntBASIC1.73□□□□□ -2.13
HPS5Q9UPZ3 RNA5SP227-201ENST00000516184 113 ntBASIC1.73□□□□□ -2.13
HPS5Q9UPZ3 SNORD1B-201ENST00000363091 84 ntBASIC1.72□□□□□ -2.13
HPS5Q9UPZ3 SNORD114-27-201ENST00000363766 70 ntBASIC1.72□□□□□ -2.13
HPS5Q9UPZ3 SNORA25-201ENST00000384384 134 ntBASIC1.72□□□□□ -2.13
HPS5Q9UPZ3 MIR1255B2-201ENST00000408618 67 ntBASIC1.72□□□□□ -2.13
HPS5Q9UPZ3 RNA5SP436-201ENST00000516020 115 ntBASIC1.72□□□□□ -2.13
HPS5Q9UPZ3 AC243829.6-201ENST00000612652 106 ntBASIC1.72□□□□□ -2.13
HPS5Q9UPZ3 RNU6-172P-201ENST00000411000 93 ntBASIC1.71□□□□□ -2.14
HPS5Q9UPZ3 AL354695.1-201ENST00000427935 228 ntBASIC1.71□□□□□ -2.14
HPS5Q9UPZ3 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
HPS5Q9UPZ3 SNORA36.1-201ENST00000363424 132 ntBASIC1.69□□□□□ -2.14
HPS5Q9UPZ3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HPS5Q9UPZ3 RNA5SP61-201ENST00000516453 100 ntBASIC1.69□□□□□ -2.14
HPS5Q9UPZ3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.69□□□□□ -2.14
HPS5Q9UPZ3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.68□□□□□ -2.14
HPS5Q9UPZ3 MIR548AG1-201ENST00000579932 66 ntBASIC1.68□□□□□ -2.14
HPS5Q9UPZ3 MIR4490-201ENST00000582647 84 ntBASIC1.68□□□□□ -2.14
HPS5Q9UPZ3 RN7SL793P-201ENST00000583259 296 ntBASIC1.68□□□□□ -2.14
HPS5Q9UPZ3 RNU6-419P-201ENST00000517030 63 ntBASIC1.67□□□□□ -2.14
HPS5Q9UPZ3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
HPS5Q9UPZ3 RNA5SP327-201ENST00000362494 101 ntBASIC1.66□□□□□ -2.14
HPS5Q9UPZ3 RNA5SP268-201ENST00000516828 124 ntBASIC1.66□□□□□ -2.14
HPS5Q9UPZ3 RNU6-247P-201ENST00000362636 107 ntBASIC1.65□□□□□ -2.15
HPS5Q9UPZ3 MIR19B1-201ENST00000384829 87 ntBASIC1.65□□□□□ -2.15
HPS5Q9UPZ3 RNU7-154P-201ENST00000516194 62 ntBASIC1.65□□□□□ -2.15
HPS5Q9UPZ3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.65□□□□□ -2.15
HPS5Q9UPZ3 Y_RNA.109-201ENST00000363215 102 ntBASIC1.64□□□□□ -2.15
HPS5Q9UPZ3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.64□□□□□ -2.15
HPS5Q9UPZ3 AC244090.1-201ENST00000441884 93 ntBASIC1.64□□□□□ -2.15
HPS5Q9UPZ3 MIR7107-201ENST00000611489 80 ntBASIC1.64□□□□□ -2.15
HPS5Q9UPZ3 SNORA70.25-201ENST00000612741 95 ntBASIC1.64□□□□□ -2.15
HPS5Q9UPZ3 MIR6767-201ENST00000637302 66 ntBASIC1.64□□□□□ -2.15
HPS5Q9UPZ3 MIR20A-201ENST00000362279 71 ntBASIC1.63□□□□□ -2.15
HPS5Q9UPZ3 AC025627.3-201ENST00000582078 182 ntBASIC1.63□□□□□ -2.15
HPS5Q9UPZ3 MIR18A-201ENST00000362310 71 ntBASIC1.62□□□□□ -2.15
HPS5Q9UPZ3 MIR200A-201ENST00000384875 90 ntBASIC1.62□□□□□ -2.15
HPS5Q9UPZ3 RNU6-337P-201ENST00000391243 106 ntBASIC1.62□□□□□ -2.15
HPS5Q9UPZ3 SNORD115-25-201ENST00000362619 82 ntBASIC1.61□□□□□ -2.15
HPS5Q9UPZ3 Y_RNA.68-201ENST00000362881 102 ntBASIC1.61□□□□□ -2.15
HPS5Q9UPZ3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.61□□□□□ -2.15
HPS5Q9UPZ3 HMGN2P22-201ENST00000427588 175 ntBASIC1.61□□□□□ -2.15
HPS5Q9UPZ3 SNORD124-201ENST00000459577 104 ntBASIC1.61□□□□□ -2.15
HPS5Q9UPZ3 MIR429-201ENST00000362106 83 ntBASIC1.6□□□□□ -2.15
HPS5Q9UPZ3 AC068338.1-201ENST00000565567 176 ntBASIC1.6□□□□□ -2.15
HPS5Q9UPZ3 MIR216A-201ENST00000385063 110 ntBASIC1.59□□□□□ -2.15
HPS5Q9UPZ3 RNA5SP94-201ENST00000516917 108 ntBASIC1.59□□□□□ -2.15
HPS5Q9UPZ3 RNU6-458P-201ENST00000384179 107 ntBASIC1.58□□□□□ -2.16
HPS5Q9UPZ3 SNORD2-201ENST00000459163 69 ntBASIC1.58□□□□□ -2.16
HPS5Q9UPZ3 MIR6773-201ENST00000612812 74 ntBASIC1.58□□□□□ -2.16
HPS5Q9UPZ3 U6.58-201ENST00000613107 107 ntBASIC1.58□□□□□ -2.16
HPS5Q9UPZ3 RNU6-924P-201ENST00000362926 108 ntBASIC1.57□□□□□ -2.16
HPS5Q9UPZ3 RNU4-45P-201ENST00000365469 141 ntBASIC1.57□□□□□ -2.16
HPS5Q9UPZ3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HPS5Q9UPZ3 RNU6-1250P-201ENST00000391218 107 ntBASIC1.57□□□□□ -2.16
HPS5Q9UPZ3 MIR4752-201ENST00000579672 72 ntBASIC1.57□□□□□ -2.16
HPS5Q9UPZ3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
HPS5Q9UPZ3 RNA5SP470-201ENST00000516463 106 ntBASIC1.56□□□□□ -2.16
HPS5Q9UPZ3 AC011195.1-201ENST00000578177 177 ntBASIC1.55□□□□□ -2.16
HPS5Q9UPZ3 RNU1-29P-201ENST00000606574 126 ntBASIC1.55□□□□□ -2.16
HPS5Q9UPZ3 Y_RNA.433-201ENST00000384089 102 ntBASIC1.54□□□□□ -2.16
HPS5Q9UPZ3 SNORA49-201ENST00000386157 136 ntBASIC1.54□□□□□ -2.16
HPS5Q9UPZ3 RNA5SP255-201ENST00000516370 107 ntBASIC1.54□□□□□ -2.16
HPS5Q9UPZ3 RNU7-160P-201ENST00000516660 62 ntBASIC1.54□□□□□ -2.16
HPS5Q9UPZ3 MIR3660-201ENST00000584845 100 ntBASIC1.54□□□□□ -2.16
HPS5Q9UPZ3 MIR7974-201ENST00000615835 79 ntBASIC1.54□□□□□ -2.16
HPS5Q9UPZ3 MIR5000-201ENST00000577717 103 ntBASIC1.53□□□□□ -2.16
HPS5Q9UPZ3 MIR5706-201ENST00000579841 80 ntBASIC1.53□□□□□ -2.16
HPS5Q9UPZ3 MIRLET7B-201ENST00000385140 83 ntBASIC1.52□□□□□ -2.17
HPS5Q9UPZ3 MIR579-201ENST00000385221 98 ntBASIC1.52□□□□□ -2.17
HPS5Q9UPZ3 SNORD99-201ENST00000408612 74 ntBASIC1.52□□□□□ -2.17
HPS5Q9UPZ3 RNU6-955P-201ENST00000410497 104 ntBASIC1.52□□□□□ -2.17
HPS5Q9UPZ3 RPS29P23-201ENST00000458635 123 ntBASIC1.52□□□□□ -2.17
HPS5Q9UPZ3 RNU6-1206P-201ENST00000516339 103 ntBASIC1.52□□□□□ -2.17
HPS5Q9UPZ3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 231.5 ms