Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MIR466-201ENST00000580653 84 ntBASIC0.74□□□□□ -2.29
NOTCH3Q9UM47 MIR4714-201ENST00000580728 77 ntBASIC0.74□□□□□ -2.29
NOTCH3Q9UM47 U4.2-201ENST00000618561 85 ntBASIC0.74□□□□□ -2.29
NOTCH3Q9UM47 MIR150-201ENST00000385048 84 ntBASIC0.73□□□□□ -2.29
NOTCH3Q9UM47 snoU13.9-201ENST00000458927 103 ntBASIC0.73□□□□□ -2.29
NOTCH3Q9UM47 MIR4422-201ENST00000581938 83 ntBASIC0.73□□□□□ -2.29
NOTCH3Q9UM47 Y_RNA.413-201ENST00000384007 102 ntBASIC0.73□□□□□ -2.29
NOTCH3Q9UM47 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
NOTCH3Q9UM47 Y_RNA.754-201ENST00000476024 102 ntBASIC0.73□□□□□ -2.29
NOTCH3Q9UM47 RNU6-758P-201ENST00000516292 89 ntBASIC0.73□□□□□ -2.29
NOTCH3Q9UM47 Y_RNA.790-201ENST00000614282 102 ntBASIC0.73□□□□□ -2.29
NOTCH3Q9UM47 Y_RNA.782-201ENST00000614695 102 ntBASIC0.73□□□□□ -2.29
NOTCH3Q9UM47 uc_338.10-201ENST00000621872 182 ntBASIC0.73□□□□□ -2.29
NOTCH3Q9UM47 AC073869.9-201ENST00000641610 120 ntBASIC0.73□□□□□ -2.29
NOTCH3Q9UM47 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
NOTCH3Q9UM47 RNA5SP403-201ENST00000363598 108 ntBASIC0.72□□□□□ -2.29
NOTCH3Q9UM47 RNU6-1065P-201ENST00000384513 106 ntBASIC0.72□□□□□ -2.29
NOTCH3Q9UM47 MIR934-201ENST00000401241 83 ntBASIC0.72□□□□□ -2.29
NOTCH3Q9UM47 MIR936-201ENST00000401264 98 ntBASIC0.72□□□□□ -2.29
NOTCH3Q9UM47 SCARNA17.3-201ENST00000516381 125 ntBASIC0.72□□□□□ -2.29
NOTCH3Q9UM47 MIR548V-201ENST00000584165 80 ntBASIC0.72□□□□□ -2.29
NOTCH3Q9UM47 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
NOTCH3Q9UM47 RNU6-990P-201ENST00000364385 104 ntBASIC0.72□□□□□ -2.29
NOTCH3Q9UM47 SNORA80D-201ENST00000384488 135 ntBASIC0.72□□□□□ -2.29
NOTCH3Q9UM47 MIR100-201ENST00000385259 80 ntBASIC0.72□□□□□ -2.29
NOTCH3Q9UM47 SNORA40.17-201ENST00000517256 115 ntBASIC0.71□□□□□ -2.3
NOTCH3Q9UM47 SNORD18A-201ENST00000363753 72 ntBASIC0.71□□□□□ -2.3
NOTCH3Q9UM47 RNU1-141P-201ENST00000364623 158 ntBASIC0.71□□□□□ -2.3
NOTCH3Q9UM47 SNORA33.1-201ENST00000364957 130 ntBASIC0.71□□□□□ -2.3
NOTCH3Q9UM47 SNORA75.1-201ENST00000391130 148 ntBASIC0.71□□□□□ -2.3
NOTCH3Q9UM47 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.71□□□□□ -2.3
NOTCH3Q9UM47 MIR4676-201ENST00000583078 72 ntBASIC0.71□□□□□ -2.3
NOTCH3Q9UM47 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
NOTCH3Q9UM47 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
NOTCH3Q9UM47 SNORD105-201ENST00000386910 85 ntBASIC0.7□□□□□ -2.3
NOTCH3Q9UM47 SNORD113-2-201ENST00000391082 72 ntBASIC0.7□□□□□ -2.3
NOTCH3Q9UM47 AC008834.1-201ENST00000511612 175 ntBASIC0.7□□□□□ -2.3
NOTCH3Q9UM47 RNU5B-6P-201ENST00000516765 68 ntBASIC0.7□□□□□ -2.3
NOTCH3Q9UM47 MIR4802-201ENST00000581881 80 ntBASIC0.7□□□□□ -2.3
NOTCH3Q9UM47 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
NOTCH3Q9UM47 AL096840.1-201ENST00000603287 93 ntBASIC0.7□□□□□ -2.3
NOTCH3Q9UM47 SNORD114-3-201ENST00000364969 75 ntBASIC0.69□□□□□ -2.3
NOTCH3Q9UM47 SNORA25-201ENST00000384384 134 ntBASIC0.69□□□□□ -2.3
NOTCH3Q9UM47 SNORD2-201ENST00000459163 69 ntBASIC0.69□□□□□ -2.3
NOTCH3Q9UM47 RNU6-351P-201ENST00000516097 100 ntBASIC0.69□□□□□ -2.3
NOTCH3Q9UM47 RNU6-469P-201ENST00000516253 101 ntBASIC0.69□□□□□ -2.3
NOTCH3Q9UM47 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.69□□□□□ -2.3
NOTCH3Q9UM47 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
NOTCH3Q9UM47 Y_RNA.246-201ENST00000364495 108 ntBASIC0.69□□□□□ -2.3
NOTCH3Q9UM47 MIR644A-201ENST00000385262 94 ntBASIC0.69□□□□□ -2.3
NOTCH3Q9UM47 SNORD99-201ENST00000408612 74 ntBASIC0.69□□□□□ -2.3
NOTCH3Q9UM47 RNA5SP368-201ENST00000364298 116 ntBASIC0.68□□□□□ -2.3
NOTCH3Q9UM47 RNU4-33P-201ENST00000364316 85 ntBASIC0.68□□□□□ -2.3
NOTCH3Q9UM47 SNORA8.2-201ENST00000384372 139 ntBASIC0.68□□□□□ -2.3
NOTCH3Q9UM47 RNU6-980P-201ENST00000516925 103 ntBASIC0.68□□□□□ -2.3
NOTCH3Q9UM47 AC108676.2-201ENST00000605225 163 ntBASIC0.68□□□□□ -2.3
NOTCH3Q9UM47 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.68□□□□□ -2.3
NOTCH3Q9UM47 Y_RNA.32-201ENST00000362589 110 ntBASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 SNORA25.8-201ENST00000364831 128 ntBASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 SNORD26-201ENST00000384147 75 ntBASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 MIR573-201ENST00000384964 99 ntBASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 RNU6-269P-201ENST00000391077 97 ntBASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 CYP3A54P-201ENST00000566950 75 ntBASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 MIR4460-201ENST00000577862 86 ntBASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 U2.7-201ENST00000619197 100 ntBASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 RNU6-302P-201ENST00000365249 107 ntBASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 SNORA41B-201ENST00000384785 128 ntBASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 MIR19B1-201ENST00000384829 87 ntBASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.67□□□□□ -2.3
NOTCH3Q9UM47 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.66□□□□□ -2.3
NOTCH3Q9UM47 RNU7-119P-201ENST00000459279 63 ntBASIC0.66□□□□□ -2.3
NOTCH3Q9UM47 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.66□□□□□ -2.3
NOTCH3Q9UM47 Y_RNA.379-201ENST00000365653 102 ntBASIC0.66□□□□□ -2.3
NOTCH3Q9UM47 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
NOTCH3Q9UM47 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.66□□□□□ -2.3
NOTCH3Q9UM47 HMGN2P22-201ENST00000427588 175 ntBASIC0.66□□□□□ -2.3
NOTCH3Q9UM47 AC021146.9-201ENST00000512503 156 ntBASIC0.66□□□□□ -2.3
NOTCH3Q9UM47 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.66□□□□□ -2.3
NOTCH3Q9UM47 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
NOTCH3Q9UM47 MIR4711-201ENST00000578274 70 ntBASIC0.66□□□□□ -2.3
NOTCH3Q9UM47 SNORD116.2-201ENST00000391251 93 ntBASIC0.65□□□□□ -2.3
NOTCH3Q9UM47 SNORD110-201ENST00000408189 75 ntBASIC0.65□□□□□ -2.3
NOTCH3Q9UM47 U7.7-201ENST00000459276 60 ntBASIC0.65□□□□□ -2.3
NOTCH3Q9UM47 RNA5SP47-201ENST00000517230 109 ntBASIC0.65□□□□□ -2.3
NOTCH3Q9UM47 MIR548X-201ENST00000580069 75 ntBASIC0.65□□□□□ -2.3
NOTCH3Q9UM47 MIR20A-201ENST00000362279 71 ntBASIC0.65□□□□□ -2.31
NOTCH3Q9UM47 Y_RNA.325-201ENST00000365171 122 ntBASIC0.65□□□□□ -2.31
NOTCH3Q9UM47 MIR548E-201ENST00000408287 88 ntBASIC0.65□□□□□ -2.31
NOTCH3Q9UM47 SNORA70.22-201ENST00000517160 124 ntBASIC0.65□□□□□ -2.31
NOTCH3Q9UM47 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
NOTCH3Q9UM47 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
NOTCH3Q9UM47 MIR18A-201ENST00000362310 71 ntBASIC0.64□□□□□ -2.31
NOTCH3Q9UM47 MIR548C-201ENST00000384815 97 ntBASIC0.64□□□□□ -2.31
NOTCH3Q9UM47 MIR519A2-201ENST00000384990 87 ntBASIC0.64□□□□□ -2.31
NOTCH3Q9UM47 MIR200A-201ENST00000384875 90 ntBASIC0.64□□□□□ -2.31
NOTCH3Q9UM47 MIR545-201ENST00000385085 106 ntBASIC0.64□□□□□ -2.31
NOTCH3Q9UM47 Y_RNA.633-201ENST00000459107 95 ntBASIC0.64□□□□□ -2.31
NOTCH3Q9UM47 AC243829.6-201ENST00000612652 106 ntBASIC0.64□□□□□ -2.31
NOTCH3Q9UM47 RNU6-753P-201ENST00000363926 107 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms