Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.99□□□□□ -2.57
SHROOM4Q9ULL8 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.99□□□□□ -2.57
SHROOM4Q9ULL8 RNU6-719P-201ENST00000516671 104 ntBASIC-0.99□□□□□ -2.57
SHROOM4Q9ULL8 snoR1.1-201ENST00000628177 80 ntBASIC-0.99□□□□□ -2.57
SHROOM4Q9ULL8 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.99□□□□□ -2.57
SHROOM4Q9ULL8 Y_RNA.281-201ENST00000364774 94 ntBASIC-1□□□□□ -2.57
SHROOM4Q9ULL8 MIR8485-201ENST00000401372 91 ntBASIC-1□□□□□ -2.57
SHROOM4Q9ULL8 Y_RNA.703-201ENST00000516846 111 ntBASIC-1□□□□□ -2.57
SHROOM4Q9ULL8 snoU83B.1-201ENST00000517136 88 ntBASIC-1□□□□□ -2.57
SHROOM4Q9ULL8 RNU6-54P-201ENST00000365563 107 ntBASIC-1.01□□□□□ -2.57
SHROOM4Q9ULL8 SNORD42B-201ENST00000458893 67 ntBASIC-1.01□□□□□ -2.57
SHROOM4Q9ULL8 AC103810.7-201ENST00000607821 91 ntBASIC-1.01□□□□□ -2.57
SHROOM4Q9ULL8 RNU6-592P-201ENST00000411333 103 ntBASIC-1.02□□□□□ -2.57
SHROOM4Q9ULL8 RNU7-85P-201ENST00000458851 63 ntBASIC-1.02□□□□□ -2.57
SHROOM4Q9ULL8 MIR4306-201ENST00000583390 91 ntBASIC-1.02□□□□□ -2.57
SHROOM4Q9ULL8 MIR6773-201ENST00000612812 74 ntBASIC-1.02□□□□□ -2.57
SHROOM4Q9ULL8 RNU6-704P-201ENST00000364162 103 ntBASIC-1.03□□□□□ -2.57
SHROOM4Q9ULL8 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.03□□□□□ -2.57
SHROOM4Q9ULL8 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.03□□□□□ -2.57
SHROOM4Q9ULL8 RNU6-24P-201ENST00000384440 107 ntBASIC-1.03□□□□□ -2.57
SHROOM4Q9ULL8 RNU7-134P-201ENST00000458997 64 ntBASIC-1.03□□□□□ -2.57
SHROOM4Q9ULL8 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.04□□□□□ -2.58
SHROOM4Q9ULL8 MIR548I1-201ENST00000408810 149 ntBASIC-1.04□□□□□ -2.58
SHROOM4Q9ULL8 MIR3133-201ENST00000583157 78 ntBASIC-1.04□□□□□ -2.58
SHROOM4Q9ULL8 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.05□□□□□ -2.58
SHROOM4Q9ULL8 MIRLET7B-201ENST00000385140 83 ntBASIC-1.05□□□□□ -2.58
SHROOM4Q9ULL8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.05□□□□□ -2.58
SHROOM4Q9ULL8 RNU6-208P-201ENST00000362431 107 ntBASIC-1.05□□□□□ -2.58
SHROOM4Q9ULL8 SNORD115-23-201ENST00000364461 82 ntBASIC-1.05□□□□□ -2.58
SHROOM4Q9ULL8 SNORD116-14-201ENST00000383894 92 ntBASIC-1.05□□□□□ -2.58
SHROOM4Q9ULL8 SNORD116-17-201ENST00000383929 92 ntBASIC-1.05□□□□□ -2.58
SHROOM4Q9ULL8 SNORD116-15-201ENST00000384445 92 ntBASIC-1.05□□□□□ -2.58
SHROOM4Q9ULL8 SNORD116-19-201ENST00000384729 92 ntBASIC-1.05□□□□□ -2.58
SHROOM4Q9ULL8 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.05□□□□□ -2.58
SHROOM4Q9ULL8 FGF7P7-201ENST00000514120 227 ntBASIC-1.05□□□□□ -2.58
SHROOM4Q9ULL8 MIR548Z-201ENST00000584743 97 ntBASIC-1.05□□□□□ -2.58
SHROOM4Q9ULL8 SNORD116-21-201ENST00000384507 92 ntBASIC-1.06□□□□□ -2.58
SHROOM4Q9ULL8 MIR3115-201ENST00000577915 68 ntBASIC-1.06□□□□□ -2.58
SHROOM4Q9ULL8 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.07□□□□□ -2.58
SHROOM4Q9ULL8 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.07□□□□□ -2.58
SHROOM4Q9ULL8 AC090617.8-201ENST00000623339 167 ntBASIC-1.07□□□□□ -2.58
SHROOM4Q9ULL8 RNU6-746P-201ENST00000384112 109 ntBASIC-1.08□□□□□ -2.58
SHROOM4Q9ULL8 MIR4464-201ENST00000580818 92 ntBASIC-1.08□□□□□ -2.58
SHROOM4Q9ULL8 YWHAEP3-201ENST00000582767 121 ntBASIC-1.08□□□□□ -2.58
SHROOM4Q9ULL8 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.09□□□□□ -2.58
SHROOM4Q9ULL8 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.09□□□□□ -2.58
SHROOM4Q9ULL8 RNU6-880P-201ENST00000384526 107 ntBASIC-1.09□□□□□ -2.58
SHROOM4Q9ULL8 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.09□□□□□ -2.58
SHROOM4Q9ULL8 RNU6-519P-201ENST00000410590 108 ntBASIC-1.09□□□□□ -2.58
SHROOM4Q9ULL8 SNORD4B-201ENST00000459083 72 ntBASIC-1.09□□□□□ -2.58
SHROOM4Q9ULL8 RNU6-706P-201ENST00000517229 104 ntBASIC-1.09□□□□□ -2.58
SHROOM4Q9ULL8 MIR6888-201ENST00000621977 67 ntBASIC-1.09□□□□□ -2.58
SHROOM4Q9ULL8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.1□□□□□ -2.59
SHROOM4Q9ULL8 RNU2-51P-201ENST00000410708 197 ntBASIC-1.1□□□□□ -2.59
SHROOM4Q9ULL8 MIR4777-201ENST00000583710 86 ntBASIC-1.1□□□□□ -2.59
SHROOM4Q9ULL8 AC021146.9-201ENST00000512503 156 ntBASIC-1.11□□□□□ -2.59
SHROOM4Q9ULL8 SCARNA23-201ENST00000516060 130 ntBASIC-1.11□□□□□ -2.59
SHROOM4Q9ULL8 SNORD63.1-201ENST00000516178 80 ntBASIC-1.11□□□□□ -2.59
SHROOM4Q9ULL8 RNU6-479P-201ENST00000516348 105 ntBASIC-1.11□□□□□ -2.59
SHROOM4Q9ULL8 SNORA63.2-201ENST00000362603 126 ntBASIC-1.12□□□□□ -2.59
SHROOM4Q9ULL8 SNORA62.4-201ENST00000365504 151 ntBASIC-1.12□□□□□ -2.59
SHROOM4Q9ULL8 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.12□□□□□ -2.59
SHROOM4Q9ULL8 RNU6-972P-201ENST00000391208 107 ntBASIC-1.12□□□□□ -2.59
SHROOM4Q9ULL8 AL445584.3-201ENST00000617173 78 ntBASIC-1.12□□□□□ -2.59
SHROOM4Q9ULL8 RNA5SP180-201ENST00000516181 101 ntBASIC-1.12□□□□□ -2.59
SHROOM4Q9ULL8 RNU6-795P-201ENST00000516323 103 ntBASIC-1.12□□□□□ -2.59
SHROOM4Q9ULL8 AL353803.5-201ENST00000599815 141 ntBASIC-1.12□□□□□ -2.59
SHROOM4Q9ULL8 RNU6-132P-201ENST00000383863 107 ntBASIC-1.13□□□□□ -2.59
SHROOM4Q9ULL8 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.13□□□□□ -2.59
SHROOM4Q9ULL8 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.13□□□□□ -2.59
SHROOM4Q9ULL8 RNU6-990P-201ENST00000364385 104 ntBASIC-1.14□□□□□ -2.59
SHROOM4Q9ULL8 MIR889-201ENST00000401280 79 ntBASIC-1.14□□□□□ -2.59
SHROOM4Q9ULL8 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.14□□□□□ -2.59
SHROOM4Q9ULL8 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.15□□□□□ -2.59
SHROOM4Q9ULL8 MIR527-201ENST00000385244 85 ntBASIC-1.15□□□□□ -2.59
SHROOM4Q9ULL8 MIR3064-201ENST00000581130 66 ntBASIC-1.15□□□□□ -2.59
SHROOM4Q9ULL8 AC012531.4-201ENST00000616509 177 ntBASIC-1.15□□□□□ -2.59
SHROOM4Q9ULL8 MIR6818-201ENST00000621576 65 ntBASIC-1.15□□□□□ -2.59
SHROOM4Q9ULL8 U6.96-201ENST00000636425 70 ntBASIC-1.15□□□□□ -2.59
SHROOM4Q9ULL8 HLA-S-202ENST00000425174 53 ntBASIC-1.16□□□□□ -2.59
SHROOM4Q9ULL8 AC132825.6-201ENST00000638861 357 ntBASIC-1.16□□□□□ -2.59
SHROOM4Q9ULL8 RNU6-495P-201ENST00000362995 107 ntBASIC-1.17□□□□□ -2.6
SHROOM4Q9ULL8 RNU6-774P-201ENST00000363238 107 ntBASIC-1.17□□□□□ -2.6
SHROOM4Q9ULL8 RNY4P7-201ENST00000364600 96 ntBASIC-1.17□□□□□ -2.6
SHROOM4Q9ULL8 RNU6-959P-201ENST00000384671 107 ntBASIC-1.17□□□□□ -2.6
SHROOM4Q9ULL8 MIR5591-201ENST00000578248 65 ntBASIC-1.17□□□□□ -2.6
SHROOM4Q9ULL8 RNA5SP26-201ENST00000362406 119 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 SNORD115-22-201ENST00000364456 82 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 SNORA63.6-201ENST00000364921 119 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 SNORD58A-201ENST00000383875 65 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 RNU4-61P-201ENST00000411243 107 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 MTATP6P29-201ENST00000415057 132 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 RNU6-62P-201ENST00000516526 102 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 MIR3140-201ENST00000583685 90 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 AC104996.3-201ENST00000590718 94 ntBASIC-1.18□□□□□ -2.6
SHROOM4Q9ULL8 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms