Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SNORA62.4-201ENST00000365504 151 ntBASIC-0.95□□□□□ -2.56
CLCF1Q9UBD9 RNU6-431P-201ENST00000383874 107 ntBASIC-0.95□□□□□ -2.56
CLCF1Q9UBD9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.95□□□□□ -2.56
CLCF1Q9UBD9 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.95□□□□□ -2.56
CLCF1Q9UBD9 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.95□□□□□ -2.56
CLCF1Q9UBD9 SNORD18.2-201ENST00000459604 70 ntBASIC-0.95□□□□□ -2.56
CLCF1Q9UBD9 SNORD116-10-201ENST00000363791 102 ntBASIC-0.96□□□□□ -2.56
CLCF1Q9UBD9 RNU6-382P-201ENST00000365181 106 ntBASIC-0.96□□□□□ -2.56
CLCF1Q9UBD9 RNU6-260P-201ENST00000384092 107 ntBASIC-0.96□□□□□ -2.56
CLCF1Q9UBD9 SNORD83B-201ENST00000386745 93 ntBASIC-0.96□□□□□ -2.56
CLCF1Q9UBD9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.96□□□□□ -2.56
CLCF1Q9UBD9 SNORA19.1-201ENST00000410656 129 ntBASIC-0.97□□□□□ -2.56
CLCF1Q9UBD9 MIR4773-1-201ENST00000637203 78 ntBASIC-0.97□□□□□ -2.56
CLCF1Q9UBD9 SNORD114-17-201ENST00000364699 75 ntBASIC-0.98□□□□□ -2.57
CLCF1Q9UBD9 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.98□□□□□ -2.57
CLCF1Q9UBD9 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.98□□□□□ -2.57
CLCF1Q9UBD9 MIR1302-5-201ENST00000408164 150 ntBASIC-0.98□□□□□ -2.57
CLCF1Q9UBD9 RNA5SP147-201ENST00000516493 109 ntBASIC-0.98□□□□□ -2.57
CLCF1Q9UBD9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.98□□□□□ -2.57
CLCF1Q9UBD9 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.99□□□□□ -2.57
CLCF1Q9UBD9 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.99□□□□□ -2.57
CLCF1Q9UBD9 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.99□□□□□ -2.57
CLCF1Q9UBD9 MIR203A-201ENST00000384836 110 ntBASIC-0.99□□□□□ -2.57
CLCF1Q9UBD9 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.99□□□□□ -2.57
CLCF1Q9UBD9 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.99□□□□□ -2.57
CLCF1Q9UBD9 AC026421.1-201ENST00000519101 163 ntBASIC-0.99□□□□□ -2.57
CLCF1Q9UBD9 MIR4464-201ENST00000580818 92 ntBASIC-0.99□□□□□ -2.57
CLCF1Q9UBD9 MIR4499-201ENST00000584834 69 ntBASIC-0.99□□□□□ -2.57
CLCF1Q9UBD9 MIR6509-201ENST00000614603 85 ntBASIC-0.99□□□□□ -2.57
CLCF1Q9UBD9 RNU6-208P-201ENST00000362431 107 ntBASIC-1□□□□□ -2.57
CLCF1Q9UBD9 RNU6-30P-201ENST00000384561 107 ntBASIC-1□□□□□ -2.57
CLCF1Q9UBD9 snoU13.17-201ENST00000458802 104 ntBASIC-1□□□□□ -2.57
CLCF1Q9UBD9 uc_338.19-201ENST00000616808 99 ntBASIC-1□□□□□ -2.57
CLCF1Q9UBD9 RNU6-824P-201ENST00000363724 104 ntBASIC-1.01□□□□□ -2.57
CLCF1Q9UBD9 RNU6-274P-201ENST00000459566 107 ntBASIC-1.01□□□□□ -2.57
CLCF1Q9UBD9 MIR4796-201ENST00000580742 81 ntBASIC-1.01□□□□□ -2.57
CLCF1Q9UBD9 SNORA2.1-201ENST00000363089 137 ntBASIC-1.02□□□□□ -2.57
CLCF1Q9UBD9 RNU6-704P-201ENST00000364162 103 ntBASIC-1.02□□□□□ -2.57
CLCF1Q9UBD9 RNU6-209P-201ENST00000384118 107 ntBASIC-1.02□□□□□ -2.57
CLCF1Q9UBD9 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.02□□□□□ -2.57
CLCF1Q9UBD9 MIR1236-201ENST00000408340 102 ntBASIC-1.02□□□□□ -2.57
CLCF1Q9UBD9 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.02□□□□□ -2.57
CLCF1Q9UBD9 AL691482.2-201ENST00000457453 84 ntBASIC-1.02□□□□□ -2.57
CLCF1Q9UBD9 MIR3133-201ENST00000583157 78 ntBASIC-1.02□□□□□ -2.57
CLCF1Q9UBD9 MIR6888-201ENST00000621977 67 ntBASIC-1.02□□□□□ -2.57
CLCF1Q9UBD9 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.03□□□□□ -2.57
CLCF1Q9UBD9 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.03□□□□□ -2.57
CLCF1Q9UBD9 RNA5SP470-201ENST00000516463 106 ntBASIC-1.03□□□□□ -2.57
CLCF1Q9UBD9 RNU6-537P-201ENST00000517277 103 ntBASIC-1.03□□□□□ -2.57
CLCF1Q9UBD9 MIR382-201ENST00000637119 76 ntBASIC-1.03□□□□□ -2.57
CLCF1Q9UBD9 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.04□□□□□ -2.58
CLCF1Q9UBD9 MIR590-201ENST00000385008 97 ntBASIC-1.04□□□□□ -2.58
CLCF1Q9UBD9 RNU7-61P-201ENST00000515897 61 ntBASIC-1.04□□□□□ -2.58
CLCF1Q9UBD9 SCARNA17-201ENST00000516183 144 ntBASIC-1.04□□□□□ -2.58
CLCF1Q9UBD9 AC140658.3-201ENST00000567603 271 ntBASIC-1.04□□□□□ -2.58
CLCF1Q9UBD9 MIR3657-201ENST00000584818 117 ntBASIC-1.04□□□□□ -2.58
CLCF1Q9UBD9 AL353803.5-201ENST00000599815 141 ntBASIC-1.04□□□□□ -2.58
CLCF1Q9UBD9 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.05□□□□□ -2.58
CLCF1Q9UBD9 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.05□□□□□ -2.58
CLCF1Q9UBD9 MIR147A-201ENST00000385079 72 ntBASIC-1.05□□□□□ -2.58
CLCF1Q9UBD9 U6.81-201ENST00000612550 106 ntBASIC-1.05□□□□□ -2.58
CLCF1Q9UBD9 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.06□□□□□ -2.58
CLCF1Q9UBD9 SNORA33.1-201ENST00000364957 130 ntBASIC-1.06□□□□□ -2.58
CLCF1Q9UBD9 AC008267.6-201ENST00000441664 139 ntBASIC-1.06□□□□□ -2.58
CLCF1Q9UBD9 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.06□□□□□ -2.58
CLCF1Q9UBD9 RNU6-959P-201ENST00000384671 107 ntBASIC-1.07□□□□□ -2.58
CLCF1Q9UBD9 AL445584.3-201ENST00000617173 78 ntBASIC-1.07□□□□□ -2.58
CLCF1Q9UBD9 RNU6-746P-201ENST00000384112 109 ntBASIC-1.08□□□□□ -2.58
CLCF1Q9UBD9 MIR1255B2-201ENST00000408618 67 ntBASIC-1.08□□□□□ -2.58
CLCF1Q9UBD9 SCARNA18B-201ENST00000458806 135 ntBASIC-1.08□□□□□ -2.58
CLCF1Q9UBD9 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.08□□□□□ -2.58
CLCF1Q9UBD9 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.09□□□□□ -2.58
CLCF1Q9UBD9 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.09□□□□□ -2.58
CLCF1Q9UBD9 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.09□□□□□ -2.58
CLCF1Q9UBD9 AL450471.1-201ENST00000447509 127 ntBASIC-1.09□□□□□ -2.58
CLCF1Q9UBD9 RNU6-752P-201ENST00000516376 102 ntBASIC-1.09□□□□□ -2.58
CLCF1Q9UBD9 CYP3A54P-201ENST00000566950 75 ntBASIC-1.09□□□□□ -2.58
CLCF1Q9UBD9 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.09□□□□□ -2.58
CLCF1Q9UBD9 U7.3-201ENST00000616123 62 ntBASIC-1.09□□□□□ -2.58
CLCF1Q9UBD9 MIR409-201ENST00000362237 79 ntBASIC-1.1□□□□□ -2.59
CLCF1Q9UBD9 RNU6-774P-201ENST00000363238 107 ntBASIC-1.1□□□□□ -2.59
CLCF1Q9UBD9 RNU6-106P-201ENST00000384405 107 ntBASIC-1.1□□□□□ -2.59
CLCF1Q9UBD9 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.1□□□□□ -2.59
CLCF1Q9UBD9 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.1□□□□□ -2.59
CLCF1Q9UBD9 MIR3671-201ENST00000580455 88 ntBASIC-1.1□□□□□ -2.59
CLCF1Q9UBD9 MIR3668-201ENST00000582138 75 ntBASIC-1.1□□□□□ -2.59
CLCF1Q9UBD9 MIR521-2-201ENST00000384818 87 ntBASIC-1.11□□□□□ -2.59
CLCF1Q9UBD9 RNU6-554P-201ENST00000410466 106 ntBASIC-1.11□□□□□ -2.59
CLCF1Q9UBD9 RNU7-134P-201ENST00000458997 64 ntBASIC-1.11□□□□□ -2.59
CLCF1Q9UBD9 RNU6-162P-201ENST00000516228 103 ntBASIC-1.11□□□□□ -2.59
CLCF1Q9UBD9 MIR378F-201ENST00000578143 78 ntBASIC-1.11□□□□□ -2.59
CLCF1Q9UBD9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.12□□□□□ -2.59
CLCF1Q9UBD9 RNU6-109P-201ENST00000516364 107 ntBASIC-1.12□□□□□ -2.59
CLCF1Q9UBD9 RNA5SP67-201ENST00000516422 131 ntBASIC-1.12□□□□□ -2.59
CLCF1Q9UBD9 RNU6-184P-201ENST00000516514 107 ntBASIC-1.12□□□□□ -2.59
CLCF1Q9UBD9 RNU6-924P-201ENST00000362926 108 ntBASIC-1.13□□□□□ -2.59
CLCF1Q9UBD9 RNU6-681P-201ENST00000364012 104 ntBASIC-1.13□□□□□ -2.59
CLCF1Q9UBD9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.13□□□□□ -2.59
CLCF1Q9UBD9 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.13□□□□□ -2.59
CLCF1Q9UBD9 RNU7-153P-201ENST00000516455 62 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms