Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MIR6507-201ENST00000613630 70 ntBASIC-0.12□□□□□ -2.43
SIX2Q9NPC8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.12□□□□□ -2.43
SIX2Q9NPC8 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.13□□□□□ -2.43
SIX2Q9NPC8 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.13□□□□□ -2.43
SIX2Q9NPC8 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.13□□□□□ -2.43
SIX2Q9NPC8 RNU6-274P-201ENST00000459566 107 ntBASIC-0.13□□□□□ -2.43
SIX2Q9NPC8 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.13□□□□□ -2.43
SIX2Q9NPC8 RNA5SP285-201ENST00000516619 119 ntBASIC-0.13□□□□□ -2.43
SIX2Q9NPC8 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.13□□□□□ -2.43
SIX2Q9NPC8 IGLL4P-201ENST00000614590 133 ntBASIC-0.13□□□□□ -2.43
SIX2Q9NPC8 MIR1295B-201ENST00000636144 60 ntBASIC-0.13□□□□□ -2.43
SIX2Q9NPC8 AC006160.2-201ENST00000637708 154 ntBASIC-0.13□□□□□ -2.43
SIX2Q9NPC8 RNY1P1-201ENST00000364372 112 ntBASIC-0.14□□□□□ -2.43
SIX2Q9NPC8 RNU6-294P-201ENST00000364999 102 ntBASIC-0.14□□□□□ -2.43
SIX2Q9NPC8 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.14□□□□□ -2.43
SIX2Q9NPC8 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.14□□□□□ -2.43
SIX2Q9NPC8 AC244250.2-201ENST00000418731 148 ntBASIC-0.14□□□□□ -2.43
SIX2Q9NPC8 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.15□□□□□ -2.43
SIX2Q9NPC8 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.15□□□□□ -2.43
SIX2Q9NPC8 RNU6-340P-201ENST00000364005 107 ntBASIC-0.15□□□□□ -2.43
SIX2Q9NPC8 SNORA63.6-201ENST00000364921 119 ntBASIC-0.15□□□□□ -2.43
SIX2Q9NPC8 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.15□□□□□ -2.43
SIX2Q9NPC8 RNU6-557P-201ENST00000516842 110 ntBASIC-0.15□□□□□ -2.43
SIX2Q9NPC8 AC145423.2-201ENST00000610631 239 ntBASIC-0.15□□□□□ -2.43
SIX2Q9NPC8 MIR6509-201ENST00000614603 85 ntBASIC-0.15□□□□□ -2.43
SIX2Q9NPC8 RNU6-681P-201ENST00000364012 104 ntBASIC-0.16□□□□□ -2.44
SIX2Q9NPC8 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.16□□□□□ -2.44
SIX2Q9NPC8 AL691482.2-201ENST00000457453 84 ntBASIC-0.16□□□□□ -2.44
SIX2Q9NPC8 RNA5SP170-201ENST00000517150 101 ntBASIC-0.16□□□□□ -2.44
SIX2Q9NPC8 SNORA40.17-201ENST00000517256 115 ntBASIC-0.16□□□□□ -2.44
SIX2Q9NPC8 YWHAEP3-201ENST00000582767 121 ntBASIC-0.16□□□□□ -2.44
SIX2Q9NPC8 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.17□□□□□ -2.44
SIX2Q9NPC8 SNORD115-25-201ENST00000362619 82 ntBASIC-0.17□□□□□ -2.44
SIX2Q9NPC8 SNORD49B-201ENST00000365172 72 ntBASIC-0.17□□□□□ -2.44
SIX2Q9NPC8 RNU6-302P-201ENST00000365249 107 ntBASIC-0.17□□□□□ -2.44
SIX2Q9NPC8 RNU6-260P-201ENST00000384092 107 ntBASIC-0.17□□□□□ -2.44
SIX2Q9NPC8 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.17□□□□□ -2.44
SIX2Q9NPC8 MIR5588-201ENST00000581890 63 ntBASIC-0.17□□□□□ -2.44
SIX2Q9NPC8 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
SIX2Q9NPC8 MIR6759-201ENST00000638110 65 ntBASIC-0.17□□□□□ -2.44
SIX2Q9NPC8 MIR655-201ENST00000362159 97 ntBASIC-0.18□□□□□ -2.44
SIX2Q9NPC8 SNORA18.1-201ENST00000363418 128 ntBASIC-0.18□□□□□ -2.44
SIX2Q9NPC8 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.18□□□□□ -2.44
SIX2Q9NPC8 AC021146.9-201ENST00000512503 156 ntBASIC-0.18□□□□□ -2.44
SIX2Q9NPC8 RNU6-752P-201ENST00000516376 102 ntBASIC-0.18□□□□□ -2.44
SIX2Q9NPC8 AP000676.1-201ENST00000533307 52 ntBASIC-0.18□□□□□ -2.44
SIX2Q9NPC8 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.19□□□□□ -2.44
SIX2Q9NPC8 RNU6-979P-201ENST00000383896 107 ntBASIC-0.19□□□□□ -2.44
SIX2Q9NPC8 MIR203A-201ENST00000384836 110 ntBASIC-0.19□□□□□ -2.44
SIX2Q9NPC8 MIR450A2-201ENST00000385022 100 ntBASIC-0.19□□□□□ -2.44
SIX2Q9NPC8 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.19□□□□□ -2.44
SIX2Q9NPC8 MIR3657-201ENST00000584818 117 ntBASIC-0.19□□□□□ -2.44
SIX2Q9NPC8 SNORA2.1-201ENST00000363089 137 ntBASIC-0.2□□□□□ -2.44
SIX2Q9NPC8 RNU6-478P-201ENST00000363904 110 ntBASIC-0.2□□□□□ -2.44
SIX2Q9NPC8 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
SIX2Q9NPC8 RNU6-686P-201ENST00000364839 107 ntBASIC-0.2□□□□□ -2.44
SIX2Q9NPC8 SNORD114-12-201ENST00000365400 75 ntBASIC-0.2□□□□□ -2.44
SIX2Q9NPC8 RNU6-455P-201ENST00000384681 107 ntBASIC-0.2□□□□□ -2.44
SIX2Q9NPC8 RNU6-129P-201ENST00000391022 107 ntBASIC-0.2□□□□□ -2.44
SIX2Q9NPC8 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.2□□□□□ -2.44
SIX2Q9NPC8 SNORD4A-201ENST00000459174 72 ntBASIC-0.2□□□□□ -2.44
SIX2Q9NPC8 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.2□□□□□ -2.44
SIX2Q9NPC8 MIR494-201ENST00000349529 81 ntBASIC-0.21□□□□□ -2.44
SIX2Q9NPC8 snoU13.13-201ENST00000458842 104 ntBASIC-0.21□□□□□ -2.44
SIX2Q9NPC8 AC022137.1-201ENST00000483735 151 ntBASIC-0.21□□□□□ -2.44
SIX2Q9NPC8 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.22□□□□□ -2.44
SIX2Q9NPC8 MIR9-2-201ENST00000384838 87 ntBASIC-0.22□□□□□ -2.44
SIX2Q9NPC8 RNA5SP147-201ENST00000516493 109 ntBASIC-0.22□□□□□ -2.44
SIX2Q9NPC8 RNU6-502P-201ENST00000362419 108 ntBASIC-0.23□□□□□ -2.45
SIX2Q9NPC8 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.23□□□□□ -2.45
SIX2Q9NPC8 RNU6-900P-201ENST00000384498 102 ntBASIC-0.23□□□□□ -2.45
SIX2Q9NPC8 MIR214-201ENST00000385214 110 ntBASIC-0.23□□□□□ -2.45
SIX2Q9NPC8 RNU7-171P-201ENST00000459581 62 ntBASIC-0.23□□□□□ -2.45
SIX2Q9NPC8 RNU6-303P-201ENST00000517091 106 ntBASIC-0.23□□□□□ -2.45
SIX2Q9NPC8 IGLVI-20-201ENST00000519296 130 ntBASIC-0.23□□□□□ -2.45
SIX2Q9NPC8 MIR3666-201ENST00000607845 111 ntBASIC-0.23□□□□□ -2.45
SIX2Q9NPC8 MIR6773-201ENST00000612812 74 ntBASIC-0.23□□□□□ -2.45
SIX2Q9NPC8 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.25□□□□□ -2.45
SIX2Q9NPC8 RNU7-55P-201ENST00000459426 62 ntBASIC-0.25□□□□□ -2.45
SIX2Q9NPC8 MIR4263-201ENST00000584745 83 ntBASIC-0.25□□□□□ -2.45
SIX2Q9NPC8 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.26□□□□□ -2.45
SIX2Q9NPC8 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.26□□□□□ -2.45
SIX2Q9NPC8 RNU6-820P-201ENST00000384273 107 ntBASIC-0.26□□□□□ -2.45
SIX2Q9NPC8 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.26□□□□□ -2.45
SIX2Q9NPC8 RNU6-242P-201ENST00000384359 107 ntBASIC-0.26□□□□□ -2.45
SIX2Q9NPC8 RNU6-337P-201ENST00000391243 106 ntBASIC-0.26□□□□□ -2.45
SIX2Q9NPC8 AC074348.1-201ENST00000426503 132 ntBASIC-0.26□□□□□ -2.45
SIX2Q9NPC8 RNU6-315P-201ENST00000362666 107 ntBASIC-0.27□□□□□ -2.45
SIX2Q9NPC8 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.27□□□□□ -2.45
SIX2Q9NPC8 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.27□□□□□ -2.45
SIX2Q9NPC8 MIRLET7B-201ENST00000385140 83 ntBASIC-0.27□□□□□ -2.45
SIX2Q9NPC8 AC062037.1-201ENST00000605302 128 ntBASIC-0.27□□□□□ -2.45
SIX2Q9NPC8 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.28□□□□□ -2.45
SIX2Q9NPC8 SNORD114-31-201ENST00000363219 75 ntBASIC-0.28□□□□□ -2.45
SIX2Q9NPC8 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.28□□□□□ -2.45
SIX2Q9NPC8 RNA5SP300-201ENST00000391197 107 ntBASIC-0.28□□□□□ -2.45
SIX2Q9NPC8 AL590491.3-201ENST00000610731 82 ntBASIC-0.28□□□□□ -2.45
SIX2Q9NPC8 U6.96-201ENST00000636425 70 ntBASIC-0.28□□□□□ -2.45
SIX2Q9NPC8 RNU6-380P-201ENST00000410207 107 ntBASIC-0.29□□□□□ -2.46
SIX2Q9NPC8 MIR6739-201ENST00000622461 75 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms