Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 SNORA24B-201ENST00000384176 131 ntBASIC-0.46□□□□□ -2.48
Q9N2K0 MIR204-201ENST00000385200 110 ntBASIC-0.46□□□□□ -2.48
Q9N2K0 RNU7-55P-201ENST00000459426 62 ntBASIC-0.46□□□□□ -2.48
Q9N2K0 RNU6-162P-201ENST00000516228 103 ntBASIC-0.46□□□□□ -2.48
Q9N2K0 RNA5SP147-201ENST00000516493 109 ntBASIC-0.46□□□□□ -2.48
Q9N2K0 AC090617.8-201ENST00000623339 167 ntBASIC-0.46□□□□□ -2.48
Q9N2K0 RNU5F-1-201ENST00000362507 117 ntBASIC-0.47□□□□□ -2.48
Q9N2K0 RNU6-905P-201ENST00000384434 107 ntBASIC-0.47□□□□□ -2.48
Q9N2K0 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.47□□□□□ -2.48
Q9N2K0 SNORA40.17-201ENST00000517256 115 ntBASIC-0.47□□□□□ -2.48
Q9N2K0 AC026421.1-201ENST00000519101 163 ntBASIC-0.47□□□□□ -2.48
Q9N2K0 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 RNU6-337P-201ENST00000391243 106 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 RNU6-721P-201ENST00000410155 105 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 AL031737.1-201ENST00000450125 223 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 snoU13.17-201ENST00000458802 104 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 RNU6-109P-201ENST00000516364 107 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 RNU6-184P-201ENST00000516514 107 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 MIR6773-201ENST00000612812 74 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 U7.3-201ENST00000616123 62 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 AL391099.1-201ENST00000624635 187 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.49□□□□□ -2.49
Q9N2K0 MIR1236-201ENST00000408340 102 ntBASIC-0.49□□□□□ -2.49
Q9N2K0 SNORD75.2-201ENST00000408784 58 ntBASIC-0.49□□□□□ -2.49
Q9N2K0 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.49□□□□□ -2.49
Q9N2K0 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.49□□□□□ -2.49
Q9N2K0 MIR6851-201ENST00000617060 67 ntBASIC-0.49□□□□□ -2.49
Q9N2K0 RNU6-382P-201ENST00000365181 106 ntBASIC-0.5□□□□□ -2.49
Q9N2K0 SNORD22.1-201ENST00000516331 125 ntBASIC-0.5□□□□□ -2.49
Q9N2K0 AC006254.2-201ENST00000603259 279 ntBASIC-0.5□□□□□ -2.49
Q9N2K0 MIR4773-1-201ENST00000637203 78 ntBASIC-0.5□□□□□ -2.49
Q9N2K0 RNU6-824P-201ENST00000363724 104 ntBASIC-0.51□□□□□ -2.49
Q9N2K0 RNU6-973P-201ENST00000364690 107 ntBASIC-0.51□□□□□ -2.49
Q9N2K0 SNORA63.6-201ENST00000364921 119 ntBASIC-0.51□□□□□ -2.49
Q9N2K0 SNORD75.1-201ENST00000408373 60 ntBASIC-0.51□□□□□ -2.49
Q9N2K0 AC021146.9-201ENST00000512503 156 ntBASIC-0.51□□□□□ -2.49
Q9N2K0 MIR548AX-201ENST00000580117 73 ntBASIC-0.51□□□□□ -2.49
Q9N2K0 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 MIR517B-201ENST00000385102 67 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 MT-TQ-201ENST00000387372 72 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 AL606753.1-201ENST00000427435 87 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 MTATP8P2-201ENST00000435212 202 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 RNU7-153P-201ENST00000516455 62 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 MIR4796-201ENST00000580742 81 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 MIR6854-201ENST00000614935 69 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 MIRLET7B-201ENST00000385140 83 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 RNU4-63P-201ENST00000411313 118 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 AP000533.3-201ENST00000447704 118 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 MIR3179-1-201ENST00000578940 84 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 MIR3179-2-201ENST00000579107 84 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 MIR3179-3-201ENST00000579566 84 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 MIR3179-4-201ENST00000617599 84 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 snoR1.1-201ENST00000628177 80 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 U6.96-201ENST00000636425 70 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 SNORD114-25-201ENST00000363742 72 ntBASIC-0.54□□□□□ -2.5
Q9N2K0 MIR124-2-201ENST00000385081 109 ntBASIC-0.54□□□□□ -2.5
Q9N2K0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
Q9N2K0 RNY4P18-201ENST00000391107 89 ntBASIC-0.54□□□□□ -2.5
Q9N2K0 RNU6-592P-201ENST00000411333 103 ntBASIC-0.54□□□□□ -2.5
Q9N2K0 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.54□□□□□ -2.5
Q9N2K0 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.55□□□□□ -2.5
Q9N2K0 RNU6-755P-201ENST00000364400 103 ntBASIC-0.56□□□□□ -2.5
Q9N2K0 SNORD115-27-201ENST00000364430 82 ntBASIC-0.56□□□□□ -2.5
Q9N2K0 SNORA33.1-201ENST00000364957 130 ntBASIC-0.56□□□□□ -2.5
Q9N2K0 MIR518B-201ENST00000385127 83 ntBASIC-0.56□□□□□ -2.5
Q9N2K0 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
Q9N2K0 AC022137.1-201ENST00000483735 151 ntBASIC-0.56□□□□□ -2.5
Q9N2K0 MIR6509-201ENST00000614603 85 ntBASIC-0.56□□□□□ -2.5
Q9N2K0 MIR409-201ENST00000362237 79 ntBASIC-0.57□□□□□ -2.5
Q9N2K0 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.57□□□□□ -2.5
Q9N2K0 SNORD115-23-201ENST00000364461 82 ntBASIC-0.57□□□□□ -2.5
Q9N2K0 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.57□□□□□ -2.5
Q9N2K0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.57□□□□□ -2.5
Q9N2K0 RNU6-208P-201ENST00000362431 107 ntBASIC-0.58□□□□□ -2.5
Q9N2K0 SNORD114-14-201ENST00000362723 75 ntBASIC-0.58□□□□□ -2.5
Q9N2K0 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.58□□□□□ -2.5
Q9N2K0 RNU6-260P-201ENST00000384092 107 ntBASIC-0.58□□□□□ -2.5
Q9N2K0 RNU6-406P-201ENST00000516470 107 ntBASIC-0.58□□□□□ -2.5
Q9N2K0 MIR450A1-201ENST00000362262 91 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 AL691482.2-201ENST00000457453 84 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 SNORD18.2-201ENST00000459604 70 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 AC021146.6-201ENST00000514659 117 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 SNORA40.13-201ENST00000516379 120 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 RNA5SP67-201ENST00000516422 131 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 RNU6-881P-201ENST00000516813 102 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 MIR3657-201ENST00000584818 117 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 AL627230.5-201ENST00000619807 58 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 MIR519C-201ENST00000385053 87 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 MIR1255B2-201ENST00000408618 67 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 RNU4-61P-201ENST00000411243 107 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 RNU6-274P-201ENST00000459566 107 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 MIR4464-201ENST00000580818 92 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 AL353803.5-201ENST00000599815 141 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 AP001318.4-201ENST00000616637 121 ntBASIC-0.61□□□□□ -2.51
Q9N2K0 MIR6888-201ENST00000621977 67 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms