Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 SNORA24B-201ENST00000384176 131 ntBASIC-0.46□□□□□ -2.48
Q9N2K0 MIR204-201ENST00000385200 110 ntBASIC-0.46□□□□□ -2.48
Q9N2K0 RNU7-55P-201ENST00000459426 62 ntBASIC-0.46□□□□□ -2.48
Q9N2K0 RNU6-162P-201ENST00000516228 103 ntBASIC-0.46□□□□□ -2.48
Q9N2K0 RNA5SP147-201ENST00000516493 109 ntBASIC-0.46□□□□□ -2.48
Q9N2K0 AC090617.8-201ENST00000623339 167 ntBASIC-0.46□□□□□ -2.48
Q9N2K0 RNU5F-1-201ENST00000362507 117 ntBASIC-0.47□□□□□ -2.48
Q9N2K0 RNU6-905P-201ENST00000384434 107 ntBASIC-0.47□□□□□ -2.48
Q9N2K0 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.47□□□□□ -2.48
Q9N2K0 SNORA40.17-201ENST00000517256 115 ntBASIC-0.47□□□□□ -2.48
Q9N2K0 AC026421.1-201ENST00000519101 163 ntBASIC-0.47□□□□□ -2.48
Q9N2K0 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 RNU6-337P-201ENST00000391243 106 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 RNU6-721P-201ENST00000410155 105 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 AL031737.1-201ENST00000450125 223 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 snoU13.17-201ENST00000458802 104 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 RNU6-109P-201ENST00000516364 107 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 RNU6-184P-201ENST00000516514 107 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 MIR6773-201ENST00000612812 74 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 U7.3-201ENST00000616123 62 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 AL391099.1-201ENST00000624635 187 ntBASIC-0.48□□□□□ -2.49
Q9N2K0 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.49□□□□□ -2.49
Q9N2K0 MIR1236-201ENST00000408340 102 ntBASIC-0.49□□□□□ -2.49
Q9N2K0 SNORD75.2-201ENST00000408784 58 ntBASIC-0.49□□□□□ -2.49
Q9N2K0 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.49□□□□□ -2.49
Q9N2K0 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.49□□□□□ -2.49
Q9N2K0 MIR6851-201ENST00000617060 67 ntBASIC-0.49□□□□□ -2.49
Q9N2K0 RNU6-382P-201ENST00000365181 106 ntBASIC-0.5□□□□□ -2.49
Q9N2K0 SNORD22.1-201ENST00000516331 125 ntBASIC-0.5□□□□□ -2.49
Q9N2K0 AC006254.2-201ENST00000603259 279 ntBASIC-0.5□□□□□ -2.49
Q9N2K0 MIR4773-1-201ENST00000637203 78 ntBASIC-0.5□□□□□ -2.49
Q9N2K0 RNU6-824P-201ENST00000363724 104 ntBASIC-0.51□□□□□ -2.49
Q9N2K0 RNU6-973P-201ENST00000364690 107 ntBASIC-0.51□□□□□ -2.49
Q9N2K0 SNORA63.6-201ENST00000364921 119 ntBASIC-0.51□□□□□ -2.49
Q9N2K0 SNORD75.1-201ENST00000408373 60 ntBASIC-0.51□□□□□ -2.49
Q9N2K0 AC021146.9-201ENST00000512503 156 ntBASIC-0.51□□□□□ -2.49
Q9N2K0 MIR548AX-201ENST00000580117 73 ntBASIC-0.51□□□□□ -2.49
Q9N2K0 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 MIR517B-201ENST00000385102 67 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 MT-TQ-201ENST00000387372 72 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 AL606753.1-201ENST00000427435 87 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 MTATP8P2-201ENST00000435212 202 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 RNU7-153P-201ENST00000516455 62 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 MIR4796-201ENST00000580742 81 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 MIR6854-201ENST00000614935 69 ntBASIC-0.52□□□□□ -2.49
Q9N2K0 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 MIRLET7B-201ENST00000385140 83 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 RNU4-63P-201ENST00000411313 118 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 AP000533.3-201ENST00000447704 118 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 MIR3179-1-201ENST00000578940 84 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 MIR3179-2-201ENST00000579107 84 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 MIR3179-3-201ENST00000579566 84 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 MIR3179-4-201ENST00000617599 84 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 snoR1.1-201ENST00000628177 80 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 U6.96-201ENST00000636425 70 ntBASIC-0.53□□□□□ -2.49
Q9N2K0 SNORD114-25-201ENST00000363742 72 ntBASIC-0.54□□□□□ -2.5
Q9N2K0 MIR124-2-201ENST00000385081 109 ntBASIC-0.54□□□□□ -2.5
Q9N2K0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
Q9N2K0 RNY4P18-201ENST00000391107 89 ntBASIC-0.54□□□□□ -2.5
Q9N2K0 RNU6-592P-201ENST00000411333 103 ntBASIC-0.54□□□□□ -2.5
Q9N2K0 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.54□□□□□ -2.5
Q9N2K0 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.55□□□□□ -2.5
Q9N2K0 RNU6-755P-201ENST00000364400 103 ntBASIC-0.56□□□□□ -2.5
Q9N2K0 SNORD115-27-201ENST00000364430 82 ntBASIC-0.56□□□□□ -2.5
Q9N2K0 SNORA33.1-201ENST00000364957 130 ntBASIC-0.56□□□□□ -2.5
Q9N2K0 MIR518B-201ENST00000385127 83 ntBASIC-0.56□□□□□ -2.5
Q9N2K0 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
Q9N2K0 AC022137.1-201ENST00000483735 151 ntBASIC-0.56□□□□□ -2.5
Q9N2K0 MIR6509-201ENST00000614603 85 ntBASIC-0.56□□□□□ -2.5
Q9N2K0 MIR409-201ENST00000362237 79 ntBASIC-0.57□□□□□ -2.5
Q9N2K0 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.57□□□□□ -2.5
Q9N2K0 SNORD115-23-201ENST00000364461 82 ntBASIC-0.57□□□□□ -2.5
Q9N2K0 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.57□□□□□ -2.5
Q9N2K0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.57□□□□□ -2.5
Q9N2K0 RNU6-208P-201ENST00000362431 107 ntBASIC-0.58□□□□□ -2.5
Q9N2K0 SNORD114-14-201ENST00000362723 75 ntBASIC-0.58□□□□□ -2.5
Q9N2K0 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.58□□□□□ -2.5
Q9N2K0 RNU6-260P-201ENST00000384092 107 ntBASIC-0.58□□□□□ -2.5
Q9N2K0 RNU6-406P-201ENST00000516470 107 ntBASIC-0.58□□□□□ -2.5
Q9N2K0 MIR450A1-201ENST00000362262 91 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 AL691482.2-201ENST00000457453 84 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 SNORD18.2-201ENST00000459604 70 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 AC021146.6-201ENST00000514659 117 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 SNORA40.13-201ENST00000516379 120 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 RNA5SP67-201ENST00000516422 131 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 RNU6-881P-201ENST00000516813 102 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 MIR3657-201ENST00000584818 117 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 AL627230.5-201ENST00000619807 58 ntBASIC-0.59□□□□□ -2.5
Q9N2K0 MIR519C-201ENST00000385053 87 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 MIR1255B2-201ENST00000408618 67 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 RNU4-61P-201ENST00000411243 107 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 RNU6-274P-201ENST00000459566 107 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 MIR4464-201ENST00000580818 92 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 AL353803.5-201ENST00000599815 141 ntBASIC-0.6□□□□□ -2.51
Q9N2K0 AP001318.4-201ENST00000616637 121 ntBASIC-0.61□□□□□ -2.51
Q9N2K0 MIR6888-201ENST00000621977 67 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms