Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AL021921.1-201ENST00000442774 93 ntBASIC1.24□□□□□ -2.21
NUCKS1Q9H1E3 RNU7-119P-201ENST00000459279 63 ntBASIC1.23□□□□□ -2.21
NUCKS1Q9H1E3 RNU6-231P-201ENST00000517122 103 ntBASIC1.23□□□□□ -2.21
NUCKS1Q9H1E3 RNU1-29P-201ENST00000606574 126 ntBASIC1.23□□□□□ -2.21
NUCKS1Q9H1E3 Y_RNA.379-201ENST00000365653 102 ntBASIC1.22□□□□□ -2.21
NUCKS1Q9H1E3 RNA5SP222-201ENST00000411039 105 ntBASIC1.22□□□□□ -2.21
NUCKS1Q9H1E3 RNU4-88P-201ENST00000411220 86 ntBASIC1.22□□□□□ -2.21
NUCKS1Q9H1E3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.22□□□□□ -2.21
NUCKS1Q9H1E3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.22□□□□□ -2.21
NUCKS1Q9H1E3 RNU6-518P-201ENST00000516056 96 ntBASIC1.22□□□□□ -2.21
NUCKS1Q9H1E3 AC243829.6-201ENST00000612652 106 ntBASIC1.22□□□□□ -2.21
NUCKS1Q9H1E3 Y_RNA.74-201ENST00000362911 99 ntBASIC1.2□□□□□ -2.22
NUCKS1Q9H1E3 AC244090.1-201ENST00000441884 93 ntBASIC1.2□□□□□ -2.22
NUCKS1Q9H1E3 AC243829.3-201ENST00000622177 108 ntBASIC1.2□□□□□ -2.22
NUCKS1Q9H1E3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
NUCKS1Q9H1E3 MIR20A-201ENST00000362279 71 ntBASIC1.19□□□□□ -2.22
NUCKS1Q9H1E3 SNORD116-16-201ENST00000384533 92 ntBASIC1.19□□□□□ -2.22
NUCKS1Q9H1E3 MIR1255B2-201ENST00000408618 67 ntBASIC1.19□□□□□ -2.22
NUCKS1Q9H1E3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.18□□□□□ -2.22
NUCKS1Q9H1E3 RNY1P8-201ENST00000383970 114 ntBASIC1.18□□□□□ -2.22
NUCKS1Q9H1E3 MIR5706-201ENST00000579841 80 ntBASIC1.18□□□□□ -2.22
NUCKS1Q9H1E3 MIR519A2-201ENST00000384990 87 ntBASIC1.17□□□□□ -2.22
NUCKS1Q9H1E3 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
NUCKS1Q9H1E3 AL353765.1-201ENST00000605514 183 ntBASIC1.17□□□□□ -2.22
NUCKS1Q9H1E3 RNU6-753P-201ENST00000363926 107 ntBASIC1.16□□□□□ -2.22
NUCKS1Q9H1E3 RNA5SP517-201ENST00000364724 117 ntBASIC1.16□□□□□ -2.22
NUCKS1Q9H1E3 Y_RNA.282-201ENST00000364793 102 ntBASIC1.16□□□□□ -2.22
NUCKS1Q9H1E3 AC069271.1-201ENST00000445577 156 ntBASIC1.16□□□□□ -2.22
NUCKS1Q9H1E3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.16□□□□□ -2.22
NUCKS1Q9H1E3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.16□□□□□ -2.22
NUCKS1Q9H1E3 MIR8070-201ENST00000616510 88 ntBASIC1.16□□□□□ -2.22
NUCKS1Q9H1E3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
NUCKS1Q9H1E3 SNORD116.2-201ENST00000391251 93 ntBASIC1.15□□□□□ -2.23
NUCKS1Q9H1E3 RNU6-980P-201ENST00000516925 103 ntBASIC1.15□□□□□ -2.23
NUCKS1Q9H1E3 AC103810.9-201ENST00000606688 112 ntBASIC1.15□□□□□ -2.23
NUCKS1Q9H1E3 MIR527-201ENST00000385244 85 ntBASIC1.14□□□□□ -2.23
NUCKS1Q9H1E3 RNU6-337P-201ENST00000391243 106 ntBASIC1.14□□□□□ -2.23
NUCKS1Q9H1E3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.14□□□□□ -2.23
NUCKS1Q9H1E3 SNORA40.16-201ENST00000517238 121 ntBASIC1.13□□□□□ -2.23
NUCKS1Q9H1E3 MIR548AG1-201ENST00000579932 66 ntBASIC1.13□□□□□ -2.23
NUCKS1Q9H1E3 SNORA25.18-201ENST00000607153 114 ntBASIC1.13□□□□□ -2.23
NUCKS1Q9H1E3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
NUCKS1Q9H1E3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
NUCKS1Q9H1E3 SNORA36.2-201ENST00000384004 127 ntBASIC1.12□□□□□ -2.23
NUCKS1Q9H1E3 SNORA49-201ENST00000386157 136 ntBASIC1.12□□□□□ -2.23
NUCKS1Q9H1E3 RNA5SP102-201ENST00000516865 106 ntBASIC1.12□□□□□ -2.23
NUCKS1Q9H1E3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.12□□□□□ -2.23
NUCKS1Q9H1E3 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
NUCKS1Q9H1E3 SNORD114-29-201ENST00000364819 70 ntBASIC1.11□□□□□ -2.23
NUCKS1Q9H1E3 SNORD2-201ENST00000459163 69 ntBASIC1.11□□□□□ -2.23
NUCKS1Q9H1E3 RPL39P28-201ENST00000465655 155 ntBASIC1.11□□□□□ -2.23
NUCKS1Q9H1E3 ACA64.5-201ENST00000516207 127 ntBASIC1.11□□□□□ -2.23
NUCKS1Q9H1E3 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
NUCKS1Q9H1E3 MIR7110-201ENST00000612638 86 ntBASIC1.11□□□□□ -2.23
NUCKS1Q9H1E3 MIR6773-201ENST00000612812 74 ntBASIC1.11□□□□□ -2.23
NUCKS1Q9H1E3 MIR96-201ENST00000362288 78 ntBASIC1.1□□□□□ -2.23
NUCKS1Q9H1E3 MIR140-201ENST00000385282 100 ntBASIC1.1□□□□□ -2.23
NUCKS1Q9H1E3 MIR1276-201ENST00000408707 83 ntBASIC1.1□□□□□ -2.23
NUCKS1Q9H1E3 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
NUCKS1Q9H1E3 RNU7-188P-201ENST00000517063 64 ntBASIC1.1□□□□□ -2.23
NUCKS1Q9H1E3 RNU7-154P-201ENST00000516194 62 ntBASIC1.09□□□□□ -2.23
NUCKS1Q9H1E3 SNORD115-25-201ENST00000362619 82 ntBASIC1.08□□□□□ -2.24
NUCKS1Q9H1E3 SNORD118-201ENST00000363593 134 ntBASIC1.08□□□□□ -2.24
NUCKS1Q9H1E3 RNU6-246P-201ENST00000384702 107 ntBASIC1.08□□□□□ -2.24
NUCKS1Q9H1E3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.07□□□□□ -2.24
NUCKS1Q9H1E3 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
NUCKS1Q9H1E3 SNORA2A-201ENST00000383885 135 ntBASIC1.07□□□□□ -2.24
NUCKS1Q9H1E3 RNU6-1232P-201ENST00000516299 86 ntBASIC1.07□□□□□ -2.24
NUCKS1Q9H1E3 RNU6-175P-201ENST00000516896 107 ntBASIC1.07□□□□□ -2.24
NUCKS1Q9H1E3 U7.6-201ENST00000610841 64 ntBASIC1.07□□□□□ -2.24
NUCKS1Q9H1E3 SNORD1B-201ENST00000363091 84 ntBASIC1.06□□□□□ -2.24
NUCKS1Q9H1E3 RNU4-33P-201ENST00000364316 85 ntBASIC1.06□□□□□ -2.24
NUCKS1Q9H1E3 RNU6-35P-201ENST00000384530 107 ntBASIC1.06□□□□□ -2.24
NUCKS1Q9H1E3 SNORA40B-201ENST00000385573 128 ntBASIC1.06□□□□□ -2.24
NUCKS1Q9H1E3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
NUCKS1Q9H1E3 RNU6-229P-201ENST00000516614 102 ntBASIC1.06□□□□□ -2.24
NUCKS1Q9H1E3 MIR6767-201ENST00000637302 66 ntBASIC1.06□□□□□ -2.24
NUCKS1Q9H1E3 MIRLET7B-201ENST00000385140 83 ntBASIC1.05□□□□□ -2.24
NUCKS1Q9H1E3 SNORA40.8-201ENST00000411034 126 ntBASIC1.05□□□□□ -2.24
NUCKS1Q9H1E3 Y_RNA.109-201ENST00000363215 102 ntBASIC1.04□□□□□ -2.24
NUCKS1Q9H1E3 RNU6-810P-201ENST00000364001 107 ntBASIC1.04□□□□□ -2.24
NUCKS1Q9H1E3 Y_RNA.423-201ENST00000384057 113 ntBASIC1.04□□□□□ -2.24
NUCKS1Q9H1E3 RNU6-172P-201ENST00000411000 93 ntBASIC1.04□□□□□ -2.24
NUCKS1Q9H1E3 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
NUCKS1Q9H1E3 MIR4677-201ENST00000584153 80 ntBASIC1.04□□□□□ -2.24
NUCKS1Q9H1E3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
NUCKS1Q9H1E3 RNA5SP470-201ENST00000516463 106 ntBASIC1.03□□□□□ -2.24
NUCKS1Q9H1E3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.02□□□□□ -2.25
NUCKS1Q9H1E3 MIR499A-201ENST00000384903 122 ntBASIC1.02□□□□□ -2.25
NUCKS1Q9H1E3 MIR501-201ENST00000390204 84 ntBASIC1.02□□□□□ -2.25
NUCKS1Q9H1E3 MIR548X-201ENST00000580069 75 ntBASIC1.02□□□□□ -2.25
NUCKS1Q9H1E3 MIR6504-201ENST00000613520 61 ntBASIC1.02□□□□□ -2.25
NUCKS1Q9H1E3 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.02□□□□□ -2.25
NUCKS1Q9H1E3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
NUCKS1Q9H1E3 RNU6-502P-201ENST00000362419 108 ntBASIC1.01□□□□□ -2.25
NUCKS1Q9H1E3 RNU1-93P-201ENST00000364704 169 ntBASIC1.01□□□□□ -2.25
NUCKS1Q9H1E3 SNORD114-22-201ENST00000365423 72 ntBASIC1.01□□□□□ -2.25
NUCKS1Q9H1E3 RNU6-1036P-201ENST00000383959 104 ntBASIC1.01□□□□□ -2.25
NUCKS1Q9H1E3 RNA5SP247-201ENST00000411181 105 ntBASIC1.01□□□□□ -2.25
NUCKS1Q9H1E3 RNU4-54P-201ENST00000516428 129 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms