Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 RNY4P19-201ENST00000362530 96 ntBASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 UBE2DNL-203ENST00000474922 222 ntBASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 RN7SL429P-201ENST00000479090 223 ntBASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 RN7SL489P-201ENST00000486185 223 ntBASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 RN7SL327P-201ENST00000488659 223 ntBASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR2114-201ENST00000516645 80 ntBASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR2276-201ENST00000516886 89 ntBASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR5004-201ENST00000579078 107 ntBASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR7112-201ENST00000616126 65 ntBASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 RN7SL853P-201ENST00000617250 223 ntBASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR6852-201ENST00000621699 66 ntBASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP9-4Q9BYQ2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR30E-201ENST00000362104 92 ntBASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR520E-201ENST00000384867 87 ntBASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 HMGN2P19-201ENST00000425149 265 ntBASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 RNU1-143P-201ENST00000516296 146 ntBASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 SCARNA11.2-201ENST00000517183 154 ntBASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR3605-201ENST00000583214 100 ntBASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 U1.23-201ENST00000610293 146 ntBASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 RNU1-68P-201ENST00000615382 146 ntBASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 U1.39-201ENST00000621562 146 ntBASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP9-4Q9BYQ2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR423-201ENST00000362201 94 ntBASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 Y_RNA.423-201ENST00000384057 113 ntBASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 SNORD56B-201ENST00000384713 71 ntBASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR200A-201ENST00000384875 90 ntBASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR128-1-201ENST00000384921 82 ntBASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 snoU13.10-201ENST00000459301 103 ntBASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR2682-201ENST00000580305 110 ntBASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR548W-201ENST00000581970 74 ntBASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR622-201ENST00000638396 96 ntBASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC0.94□□□□□ -2.26
KRTAP9-4Q9BYQ2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 RNA5SP393-201ENST00000363423 117 ntBASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 SNORD114-17-201ENST00000364699 75 ntBASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 SNORA7.4-201ENST00000384249 137 ntBASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR19B1-201ENST00000384829 87 ntBASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 RNA5SP489-201ENST00000410986 109 ntBASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 AC108740.1-201ENST00000498629 225 ntBASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR3945-201ENST00000581853 98 ntBASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 AC073476.4-201ENST00000628409 72 ntBASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP9-4Q9BYQ2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR148A-201ENST00000362215 68 ntBASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 RNA5SP374-201ENST00000362939 125 ntBASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 SNORA80A-201ENST00000363922 136 ntBASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 RNU6-301P-201ENST00000384277 107 ntBASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 RNU6-110P-201ENST00000384508 104 ntBASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 SNORD15B-201ENST00000384714 146 ntBASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 SNORA67.5-201ENST00000391036 107 ntBASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 RNA5SP229-201ENST00000410809 99 ntBASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 HMGN1P18-201ENST00000457642 277 ntBASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 AC104984.5-201ENST00000586878 94 ntBASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 FO624990.1-201ENST00000636373 85 ntBASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP9-4Q9BYQ2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
KRTAP9-4Q9BYQ2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC0.91□□□□□ -2.26
KRTAP9-4Q9BYQ2 SNORA32.1-201ENST00000364514 115 ntBASIC0.91□□□□□ -2.26
KRTAP9-4Q9BYQ2 SNORA71.1-201ENST00000364523 117 ntBASIC0.91□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR184-201ENST00000384962 84 ntBASIC0.91□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR4446-201ENST00000578505 67 ntBASIC0.91□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIR4672-201ENST00000583126 81 ntBASIC0.91□□□□□ -2.26
KRTAP9-4Q9BYQ2 U7.8-201ENST00000619968 63 ntBASIC0.91□□□□□ -2.26
KRTAP9-4Q9BYQ2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
KRTAP9-4Q9BYQ2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
KRTAP9-4Q9BYQ2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC0.91□□□□□ -2.26
KRTAP9-4Q9BYQ2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.26
KRTAP9-4Q9BYQ2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC0.9□□□□□ -2.26
KRTAP9-4Q9BYQ2 MIRLET7A2-201ENST00000362105 72 ntBASIC0.9□□□□□ -2.27
KRTAP9-4Q9BYQ2 MIR422A-201ENST00000362286 90 ntBASIC0.9□□□□□ -2.27
KRTAP9-4Q9BYQ2 Y_RNA.449-201ENST00000384187 102 ntBASIC0.9□□□□□ -2.27
KRTAP9-4Q9BYQ2 MIR760-201ENST00000390220 80 ntBASIC0.9□□□□□ -2.27
KRTAP9-4Q9BYQ2 RNA5SP217-201ENST00000515959 91 ntBASIC0.9□□□□□ -2.27
KRTAP9-4Q9BYQ2 Y_RNA.663-201ENST00000516043 101 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms