Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 SNORA15B-2-201ENST00000384058 135 ntBASIC0.9□□□□□ -2.27
TRIM56Q9BRZ2 SNORA15B-1-201ENST00000384334 135 ntBASIC0.9□□□□□ -2.27
TRIM56Q9BRZ2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.9□□□□□ -2.27
TRIM56Q9BRZ2 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
TRIM56Q9BRZ2 MIR5000-201ENST00000577717 103 ntBASIC0.9□□□□□ -2.27
TRIM56Q9BRZ2 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
TRIM56Q9BRZ2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TRIM56Q9BRZ2 MIR521-2-201ENST00000384818 87 ntBASIC0.89□□□□□ -2.27
TRIM56Q9BRZ2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
TRIM56Q9BRZ2 AC069271.1-201ENST00000445577 156 ntBASIC0.89□□□□□ -2.27
TRIM56Q9BRZ2 RNU6-848P-201ENST00000515948 107 ntBASIC0.88□□□□□ -2.27
TRIM56Q9BRZ2 RNU6-617P-201ENST00000516147 107 ntBASIC0.88□□□□□ -2.27
TRIM56Q9BRZ2 RNU6-473P-201ENST00000516164 107 ntBASIC0.88□□□□□ -2.27
TRIM56Q9BRZ2 RNU6-542P-201ENST00000516405 103 ntBASIC0.88□□□□□ -2.27
TRIM56Q9BRZ2 RNU6-1049P-201ENST00000516414 107 ntBASIC0.88□□□□□ -2.27
TRIM56Q9BRZ2 RNU6-656P-201ENST00000516785 107 ntBASIC0.88□□□□□ -2.27
TRIM56Q9BRZ2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.88□□□□□ -2.27
TRIM56Q9BRZ2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRIM56Q9BRZ2 Y_RNA.375-201ENST00000365625 101 ntBASIC0.87□□□□□ -2.27
TRIM56Q9BRZ2 SNORA2A-201ENST00000383885 135 ntBASIC0.87□□□□□ -2.27
TRIM56Q9BRZ2 MIR518A1-201ENST00000385068 85 ntBASIC0.87□□□□□ -2.27
TRIM56Q9BRZ2 HMGN2P22-201ENST00000427588 175 ntBASIC0.87□□□□□ -2.27
TRIM56Q9BRZ2 CYP3A137P-201ENST00000562436 69 ntBASIC0.87□□□□□ -2.27
TRIM56Q9BRZ2 Y_RNA.125-201ENST00000363371 111 ntBASIC0.86□□□□□ -2.27
TRIM56Q9BRZ2 RNA5SP215-201ENST00000363440 122 ntBASIC0.86□□□□□ -2.27
TRIM56Q9BRZ2 snoU13.13-201ENST00000458842 104 ntBASIC0.86□□□□□ -2.27
TRIM56Q9BRZ2 RNU1-29P-201ENST00000606574 126 ntBASIC0.86□□□□□ -2.27
TRIM56Q9BRZ2 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
TRIM56Q9BRZ2 RNU6-863P-201ENST00000515989 104 ntBASIC0.85□□□□□ -2.27
TRIM56Q9BRZ2 RNU6-229P-201ENST00000516614 102 ntBASIC0.85□□□□□ -2.27
TRIM56Q9BRZ2 AL109933.3-201ENST00000619095 188 ntBASIC0.85□□□□□ -2.27
TRIM56Q9BRZ2 MIR20A-201ENST00000362279 71 ntBASIC0.84□□□□□ -2.27
TRIM56Q9BRZ2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
TRIM56Q9BRZ2 MIR548E-201ENST00000408287 88 ntBASIC0.84□□□□□ -2.27
TRIM56Q9BRZ2 RNU6-1089P-201ENST00000516473 104 ntBASIC0.84□□□□□ -2.27
TRIM56Q9BRZ2 RN7SL793P-201ENST00000583259 296 ntBASIC0.84□□□□□ -2.27
TRIM56Q9BRZ2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
TRIM56Q9BRZ2 AC244090.1-201ENST00000441884 93 ntBASIC0.83□□□□□ -2.28
TRIM56Q9BRZ2 Y_RNA.633-201ENST00000459107 95 ntBASIC0.83□□□□□ -2.28
TRIM56Q9BRZ2 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
TRIM56Q9BRZ2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TRIM56Q9BRZ2 RNU6-302P-201ENST00000365249 107 ntBASIC0.82□□□□□ -2.28
TRIM56Q9BRZ2 MIR582-201ENST00000365731 98 ntBASIC0.82□□□□□ -2.28
TRIM56Q9BRZ2 Y_RNA.423-201ENST00000384057 113 ntBASIC0.82□□□□□ -2.28
TRIM56Q9BRZ2 MIR216A-201ENST00000385063 110 ntBASIC0.82□□□□□ -2.28
TRIM56Q9BRZ2 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
TRIM56Q9BRZ2 AL157398.1-201ENST00000452981 186 ntBASIC0.82□□□□□ -2.28
TRIM56Q9BRZ2 SNORD2-201ENST00000459163 69 ntBASIC0.82□□□□□ -2.28
TRIM56Q9BRZ2 SNORD114-29-201ENST00000364819 70 ntBASIC0.81□□□□□ -2.28
TRIM56Q9BRZ2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.81□□□□□ -2.28
TRIM56Q9BRZ2 AC098934.3-201ENST00000430450 190 ntBASIC0.8□□□□□ -2.28
TRIM56Q9BRZ2 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
TRIM56Q9BRZ2 MIR548C-201ENST00000384815 97 ntBASIC0.79□□□□□ -2.28
TRIM56Q9BRZ2 MIR4714-201ENST00000580728 77 ntBASIC0.79□□□□□ -2.28
TRIM56Q9BRZ2 SNORA33.1-201ENST00000364957 130 ntBASIC0.78□□□□□ -2.28
TRIM56Q9BRZ2 RNA5SP299-201ENST00000391203 116 ntBASIC0.78□□□□□ -2.28
TRIM56Q9BRZ2 RNU4-54P-201ENST00000516428 129 ntBASIC0.78□□□□□ -2.28
TRIM56Q9BRZ2 RNU6-669P-201ENST00000365575 107 ntBASIC0.77□□□□□ -2.29
TRIM56Q9BRZ2 MIR9-2-201ENST00000384838 87 ntBASIC0.77□□□□□ -2.29
TRIM56Q9BRZ2 MIR516B1-201ENST00000385211 90 ntBASIC0.77□□□□□ -2.29
TRIM56Q9BRZ2 MIR760-201ENST00000390220 80 ntBASIC0.76□□□□□ -2.29
TRIM56Q9BRZ2 AC110620.1-201ENST00000416042 228 ntBASIC0.76□□□□□ -2.29
TRIM56Q9BRZ2 Y_RNA.374-201ENST00000365606 101 ntBASIC0.75□□□□□ -2.29
TRIM56Q9BRZ2 SCARNA21.1-201ENST00000515996 128 ntBASIC0.75□□□□□ -2.29
TRIM56Q9BRZ2 MIR6755-201ENST00000619993 66 ntBASIC0.75□□□□□ -2.29
TRIM56Q9BRZ2 U6.96-201ENST00000636425 70 ntBASIC0.75□□□□□ -2.29
TRIM56Q9BRZ2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
TRIM56Q9BRZ2 RNU6-945P-201ENST00000383947 107 ntBASIC0.74□□□□□ -2.29
TRIM56Q9BRZ2 RNA5SP121-201ENST00000516537 101 ntBASIC0.74□□□□□ -2.29
TRIM56Q9BRZ2 MIR4677-201ENST00000584153 80 ntBASIC0.74□□□□□ -2.29
TRIM56Q9BRZ2 MIR501-201ENST00000390204 84 ntBASIC0.73□□□□□ -2.29
TRIM56Q9BRZ2 RNU7-188P-201ENST00000517063 64 ntBASIC0.73□□□□□ -2.29
TRIM56Q9BRZ2 MIR548V-201ENST00000584165 80 ntBASIC0.73□□□□□ -2.29
TRIM56Q9BRZ2 MIR548AD-201ENST00000584780 82 ntBASIC0.73□□□□□ -2.29
TRIM56Q9BRZ2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.72□□□□□ -2.29
TRIM56Q9BRZ2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.72□□□□□ -2.29
TRIM56Q9BRZ2 RNA5SP128-201ENST00000365305 116 ntBASIC0.72□□□□□ -2.29
TRIM56Q9BRZ2 MIR517B-201ENST00000385102 67 ntBASIC0.72□□□□□ -2.29
TRIM56Q9BRZ2 AC243829.6-201ENST00000612652 106 ntBASIC0.72□□□□□ -2.29
TRIM56Q9BRZ2 U2.7-201ENST00000619197 100 ntBASIC0.72□□□□□ -2.29
TRIM56Q9BRZ2 AC084368.1-201ENST00000620935 65 ntBASIC0.72□□□□□ -2.29
TRIM56Q9BRZ2 SNORA25.5-201ENST00000363782 126 ntBASIC0.71□□□□□ -2.3
TRIM56Q9BRZ2 MIR193B-201ENST00000384907 83 ntBASIC0.71□□□□□ -2.3
TRIM56Q9BRZ2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
TRIM56Q9BRZ2 SNORD113-2-201ENST00000391082 72 ntBASIC0.7□□□□□ -2.3
TRIM56Q9BRZ2 RNU6-1232P-201ENST00000516299 86 ntBASIC0.7□□□□□ -2.3
TRIM56Q9BRZ2 MIR6513-201ENST00000621188 64 ntBASIC0.7□□□□□ -2.3
TRIM56Q9BRZ2 Y_RNA.30-201ENST00000362572 97 ntBASIC0.69□□□□□ -2.3
TRIM56Q9BRZ2 RNU6-698P-201ENST00000363523 107 ntBASIC0.69□□□□□ -2.3
TRIM56Q9BRZ2 RNU6-34P-201ENST00000364874 107 ntBASIC0.69□□□□□ -2.3
TRIM56Q9BRZ2 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
TRIM56Q9BRZ2 MIR1273G-201ENST00000577677 100 ntBASIC0.69□□□□□ -2.3
TRIM56Q9BRZ2 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
TRIM56Q9BRZ2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.69□□□□□ -2.3
TRIM56Q9BRZ2 RNU6-940P-201ENST00000363433 104 ntBASIC0.68□□□□□ -2.3
TRIM56Q9BRZ2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
TRIM56Q9BRZ2 RNU7-129P-201ENST00000516128 62 ntBASIC0.68□□□□□ -2.3
TRIM56Q9BRZ2 RNU7-174P-201ENST00000516248 59 ntBASIC0.68□□□□□ -2.3
TRIM56Q9BRZ2 RNU6-92P-201ENST00000605893 104 ntBASIC0.68□□□□□ -2.3
TRIM56Q9BRZ2 CYP3A54P-201ENST00000566950 75 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 189.8 ms