Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
SH2D3AQ9BRG2 MIR582-201ENST00000365731 98 ntBASIC0.55□□□□□ -2.32
SH2D3AQ9BRG2 RNU6-604P-201ENST00000390917 100 ntBASIC0.55□□□□□ -2.32
SH2D3AQ9BRG2 AL691482.2-201ENST00000457453 84 ntBASIC0.55□□□□□ -2.32
SH2D3AQ9BRG2 RNU6-863P-201ENST00000515989 104 ntBASIC0.55□□□□□ -2.32
SH2D3AQ9BRG2 MIR6509-201ENST00000614603 85 ntBASIC0.55□□□□□ -2.32
SH2D3AQ9BRG2 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
SH2D3AQ9BRG2 MIR103A1-201ENST00000362165 78 ntBASIC0.54□□□□□ -2.32
SH2D3AQ9BRG2 SNORD115-31-201ENST00000365318 82 ntBASIC0.54□□□□□ -2.32
SH2D3AQ9BRG2 SNORD45A-201ENST00000384512 84 ntBASIC0.54□□□□□ -2.32
SH2D3AQ9BRG2 MIR652-201ENST00000385278 98 ntBASIC0.54□□□□□ -2.32
SH2D3AQ9BRG2 SNORD114-4-201ENST00000363962 75 ntBASIC0.53□□□□□ -2.32
SH2D3AQ9BRG2 RNU6-1241P-201ENST00000384536 107 ntBASIC0.53□□□□□ -2.32
SH2D3AQ9BRG2 RNU6-587P-201ENST00000391282 106 ntBASIC0.53□□□□□ -2.32
SH2D3AQ9BRG2 SNORD71-201ENST00000411292 86 ntBASIC0.53□□□□□ -2.32
SH2D3AQ9BRG2 RNU6-634P-201ENST00000459134 106 ntBASIC0.53□□□□□ -2.32
SH2D3AQ9BRG2 RNU7-129P-201ENST00000516128 62 ntBASIC0.53□□□□□ -2.32
SH2D3AQ9BRG2 RNA5SP121-201ENST00000516537 101 ntBASIC0.53□□□□□ -2.32
SH2D3AQ9BRG2 AL109933.3-201ENST00000619095 188 ntBASIC0.53□□□□□ -2.32
SH2D3AQ9BRG2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
SH2D3AQ9BRG2 Y_RNA.407-201ENST00000383986 113 ntBASIC0.52□□□□□ -2.33
SH2D3AQ9BRG2 RNU6-260P-201ENST00000384092 107 ntBASIC0.52□□□□□ -2.33
SH2D3AQ9BRG2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SH2D3AQ9BRG2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
SH2D3AQ9BRG2 RNU6-982P-201ENST00000516216 102 ntBASIC0.52□□□□□ -2.33
SH2D3AQ9BRG2 MIR330-201ENST00000362196 94 ntBASIC0.51□□□□□ -2.33
SH2D3AQ9BRG2 SNORD45.1-201ENST00000363181 77 ntBASIC0.51□□□□□ -2.33
SH2D3AQ9BRG2 SNORD44.1-201ENST00000363202 61 ntBASIC0.51□□□□□ -2.33
SH2D3AQ9BRG2 Y_RNA.125-201ENST00000363371 111 ntBASIC0.51□□□□□ -2.33
SH2D3AQ9BRG2 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
SH2D3AQ9BRG2 MIR3657-201ENST00000584818 117 ntBASIC0.51□□□□□ -2.33
SH2D3AQ9BRG2 MIR499B-201ENST00000636498 73 ntBASIC0.51□□□□□ -2.33
SH2D3AQ9BRG2 SNORD115-22-201ENST00000364456 82 ntBASIC0.5□□□□□ -2.33
SH2D3AQ9BRG2 SNORA2A-201ENST00000383885 135 ntBASIC0.5□□□□□ -2.33
SH2D3AQ9BRG2 MIR760-201ENST00000390220 80 ntBASIC0.5□□□□□ -2.33
SH2D3AQ9BRG2 SCARNA17.3-201ENST00000516381 125 ntBASIC0.5□□□□□ -2.33
SH2D3AQ9BRG2 SNORA2.1-201ENST00000363089 137 ntBASIC0.49□□□□□ -2.33
SH2D3AQ9BRG2 MIR501-201ENST00000390204 84 ntBASIC0.49□□□□□ -2.33
SH2D3AQ9BRG2 RNA5SP257-201ENST00000363023 116 ntBASIC0.48□□□□□ -2.33
SH2D3AQ9BRG2 Y_RNA.250-201ENST00000364542 110 ntBASIC0.48□□□□□ -2.33
SH2D3AQ9BRG2 MIR154-201ENST00000385243 84 ntBASIC0.48□□□□□ -2.33
SH2D3AQ9BRG2 Y_RNA.633-201ENST00000459107 95 ntBASIC0.48□□□□□ -2.33
SH2D3AQ9BRG2 MIR548AD-201ENST00000584780 82 ntBASIC0.48□□□□□ -2.33
SH2D3AQ9BRG2 U7.6-201ENST00000610841 64 ntBASIC0.48□□□□□ -2.33
SH2D3AQ9BRG2 MIR8053-201ENST00000613344 75 ntBASIC0.48□□□□□ -2.33
SH2D3AQ9BRG2 Y_RNA.68-201ENST00000362881 102 ntBASIC0.47□□□□□ -2.33
SH2D3AQ9BRG2 RNA5SP62-201ENST00000363457 110 ntBASIC0.47□□□□□ -2.33
SH2D3AQ9BRG2 Y_RNA.178-201ENST00000363832 102 ntBASIC0.47□□□□□ -2.33
SH2D3AQ9BRG2 MIR548E-201ENST00000408287 88 ntBASIC0.47□□□□□ -2.33
SH2D3AQ9BRG2 MIR1197-201ENST00000408818 88 ntBASIC0.47□□□□□ -2.33
SH2D3AQ9BRG2 AC243829.6-201ENST00000612652 106 ntBASIC0.47□□□□□ -2.33
SH2D3AQ9BRG2 MIR6739-201ENST00000622461 75 ntBASIC0.47□□□□□ -2.33
SH2D3AQ9BRG2 RNU6-540P-201ENST00000384622 101 ntBASIC0.46□□□□□ -2.34
SH2D3AQ9BRG2 MIR516B1-201ENST00000385211 90 ntBASIC0.46□□□□□ -2.34
SH2D3AQ9BRG2 uc_338.10-201ENST00000621872 182 ntBASIC0.46□□□□□ -2.34
SH2D3AQ9BRG2 RNU6-815P-201ENST00000384080 113 ntBASIC0.45□□□□□ -2.34
SH2D3AQ9BRG2 RNU6-871P-201ENST00000516122 100 ntBASIC0.45□□□□□ -2.34
SH2D3AQ9BRG2 RNU7-188P-201ENST00000517063 64 ntBASIC0.45□□□□□ -2.34
SH2D3AQ9BRG2 MIR4677-201ENST00000584153 80 ntBASIC0.45□□□□□ -2.34
SH2D3AQ9BRG2 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
SH2D3AQ9BRG2 MIR106A-201ENST00000384870 81 ntBASIC0.44□□□□□ -2.34
SH2D3AQ9BRG2 AC073261.1-201ENST00000429409 121 ntBASIC0.44□□□□□ -2.34
SH2D3AQ9BRG2 SNORD113.1-201ENST00000363280 73 ntBASIC0.43□□□□□ -2.34
SH2D3AQ9BRG2 RNA5SP128-201ENST00000365305 116 ntBASIC0.43□□□□□ -2.34
SH2D3AQ9BRG2 AC244090.1-201ENST00000441884 93 ntBASIC0.43□□□□□ -2.34
SH2D3AQ9BRG2 AC139453.2-201ENST00000487255 133 ntBASIC0.43□□□□□ -2.34
SH2D3AQ9BRG2 AC114801.3-201ENST00000510231 177 ntBASIC0.43□□□□□ -2.34
SH2D3AQ9BRG2 AC021146.9-201ENST00000512503 156 ntBASIC0.43□□□□□ -2.34
SH2D3AQ9BRG2 SNORA62.5-201ENST00000516634 120 ntBASIC0.43□□□□□ -2.34
SH2D3AQ9BRG2 MIR3925-201ENST00000584674 77 ntBASIC0.43□□□□□ -2.34
SH2D3AQ9BRG2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.42□□□□□ -2.34
SH2D3AQ9BRG2 SNORD116-24-201ENST00000384549 92 ntBASIC0.42□□□□□ -2.34
SH2D3AQ9BRG2 MIR643-201ENST00000385267 97 ntBASIC0.42□□□□□ -2.34
SH2D3AQ9BRG2 MIR876-201ENST00000401147 81 ntBASIC0.42□□□□□ -2.34
SH2D3AQ9BRG2 RNU6-539P-201ENST00000516665 103 ntBASIC0.42□□□□□ -2.34
SH2D3AQ9BRG2 RNU6-881P-201ENST00000516813 102 ntBASIC0.42□□□□□ -2.34
SH2D3AQ9BRG2 AC090617.8-201ENST00000623339 167 ntBASIC0.42□□□□□ -2.34
SH2D3AQ9BRG2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.42□□□□□ -2.34
SH2D3AQ9BRG2 RN7SL660P-201ENST00000614852 299 ntBASIC0.41□□□□□ -2.34
SH2D3AQ9BRG2 MIR20A-201ENST00000362279 71 ntBASIC0.4□□□□□ -2.35
SH2D3AQ9BRG2 SNORA63.6-201ENST00000364921 119 ntBASIC0.4□□□□□ -2.35
SH2D3AQ9BRG2 SNORA33.1-201ENST00000364957 130 ntBASIC0.4□□□□□ -2.35
SH2D3AQ9BRG2 MIR521-2-201ENST00000384818 87 ntBASIC0.4□□□□□ -2.35
SH2D3AQ9BRG2 SNORA49-201ENST00000386157 136 ntBASIC0.4□□□□□ -2.35
SH2D3AQ9BRG2 RNU6-656P-201ENST00000516785 107 ntBASIC0.4□□□□□ -2.35
SH2D3AQ9BRG2 RNU6-175P-201ENST00000516896 107 ntBASIC0.4□□□□□ -2.35
SH2D3AQ9BRG2 MIR4514-201ENST00000581410 57 ntBASIC0.4□□□□□ -2.35
SH2D3AQ9BRG2 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
SH2D3AQ9BRG2 RNU6-645P-201ENST00000364649 106 ntBASIC0.39□□□□□ -2.35
SH2D3AQ9BRG2 SNORD114-29-201ENST00000364819 70 ntBASIC0.39□□□□□ -2.35
SH2D3AQ9BRG2 SNORD30.1-201ENST00000391309 70 ntBASIC0.39□□□□□ -2.35
SH2D3AQ9BRG2 SNORA15B-2-201ENST00000384058 135 ntBASIC0.38□□□□□ -2.35
SH2D3AQ9BRG2 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
SH2D3AQ9BRG2 SNORA15B-1-201ENST00000384334 135 ntBASIC0.38□□□□□ -2.35
SH2D3AQ9BRG2 RNU6-127P-201ENST00000390897 107 ntBASIC0.38□□□□□ -2.35
SH2D3AQ9BRG2 RNU6-663P-201ENST00000391105 106 ntBASIC0.38□□□□□ -2.35
SH2D3AQ9BRG2 RNU6-1216P-201ENST00000362590 107 ntBASIC0.37□□□□□ -2.35
SH2D3AQ9BRG2 Y_RNA.386-201ENST00000383913 105 ntBASIC0.37□□□□□ -2.35
SH2D3AQ9BRG2 RNU6-895P-201ENST00000384125 103 ntBASIC0.37□□□□□ -2.35
SH2D3AQ9BRG2 AC108740.1-201ENST00000498629 225 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 232.6 ms