Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC097510.1-201ENST00000510945 133 ntBASIC-0.26□□□□□ -2.45
SIN3AQ96ST3 RNU6-758P-201ENST00000516292 89 ntBASIC-0.26□□□□□ -2.45
SIN3AQ96ST3 SNORD114-28-201ENST00000363610 72 ntBASIC-0.27□□□□□ -2.45
SIN3AQ96ST3 SNORD116-22-201ENST00000384430 92 ntBASIC-0.27□□□□□ -2.45
SIN3AQ96ST3 RNY1P7-201ENST00000384743 110 ntBASIC-0.27□□□□□ -2.45
SIN3AQ96ST3 RNU6-497P-201ENST00000365316 104 ntBASIC-0.28□□□□□ -2.45
SIN3AQ96ST3 SNORD114-12-201ENST00000365400 75 ntBASIC-0.28□□□□□ -2.45
SIN3AQ96ST3 RNU6-402P-201ENST00000410678 103 ntBASIC-0.28□□□□□ -2.45
SIN3AQ96ST3 MIR101-1-201ENST00000362265 75 ntBASIC-0.29□□□□□ -2.46
SIN3AQ96ST3 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.29□□□□□ -2.46
SIN3AQ96ST3 RNU6-990P-201ENST00000364385 104 ntBASIC-0.29□□□□□ -2.46
SIN3AQ96ST3 MIR604-201ENST00000384880 94 ntBASIC-0.29□□□□□ -2.46
SIN3AQ96ST3 RNA5SP25-201ENST00000410815 110 ntBASIC-0.29□□□□□ -2.46
SIN3AQ96ST3 RNU6-267P-201ENST00000516714 103 ntBASIC-0.29□□□□□ -2.46
SIN3AQ96ST3 AC006254.2-201ENST00000603259 279 ntBASIC-0.29□□□□□ -2.46
SIN3AQ96ST3 RNA5SP368-201ENST00000364298 116 ntBASIC-0.3□□□□□ -2.46
SIN3AQ96ST3 U6.81-201ENST00000612550 106 ntBASIC-0.3□□□□□ -2.46
SIN3AQ96ST3 SNORD2-201ENST00000459163 69 ntBASIC-0.31□□□□□ -2.46
SIN3AQ96ST3 SNORA40.17-201ENST00000517256 115 ntBASIC-0.31□□□□□ -2.46
SIN3AQ96ST3 AP000676.1-201ENST00000533307 52 ntBASIC-0.31□□□□□ -2.46
SIN3AQ96ST3 MIR3666-201ENST00000607845 111 ntBASIC-0.31□□□□□ -2.46
SIN3AQ96ST3 MIR4773-1-201ENST00000637203 78 ntBASIC-0.31□□□□□ -2.46
SIN3AQ96ST3 SNORD115-25-201ENST00000362619 82 ntBASIC-0.32□□□□□ -2.46
SIN3AQ96ST3 snoU13.19-201ENST00000459148 104 ntBASIC-0.32□□□□□ -2.46
SIN3AQ96ST3 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.33□□□□□ -2.46
SIN3AQ96ST3 SNORA63.6-201ENST00000364921 119 ntBASIC-0.33□□□□□ -2.46
SIN3AQ96ST3 RNU6-455P-201ENST00000384681 107 ntBASIC-0.33□□□□□ -2.46
SIN3AQ96ST3 MIR9-2-201ENST00000384838 87 ntBASIC-0.33□□□□□ -2.46
SIN3AQ96ST3 AC108676.2-201ENST00000605225 163 ntBASIC-0.33□□□□□ -2.46
SIN3AQ96ST3 MIR8064-201ENST00000612863 90 ntBASIC-0.33□□□□□ -2.46
SIN3AQ96ST3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.34□□□□□ -2.46
SIN3AQ96ST3 SNORD115-37-201ENST00000363768 82 ntBASIC-0.34□□□□□ -2.46
SIN3AQ96ST3 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.34□□□□□ -2.46
SIN3AQ96ST3 RNU6-49P-201ENST00000384256 107 ntBASIC-0.34□□□□□ -2.46
SIN3AQ96ST3 AL450471.1-201ENST00000447509 127 ntBASIC-0.34□□□□□ -2.46
SIN3AQ96ST3 AC093729.1-201ENST00000513074 128 ntBASIC-0.34□□□□□ -2.46
SIN3AQ96ST3 RNU6-844P-201ENST00000517175 102 ntBASIC-0.34□□□□□ -2.46
SIN3AQ96ST3 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.35□□□□□ -2.47
SIN3AQ96ST3 RNU6-675P-201ENST00000384236 104 ntBASIC-0.35□□□□□ -2.47
SIN3AQ96ST3 RNA5SP300-201ENST00000391197 107 ntBASIC-0.35□□□□□ -2.47
SIN3AQ96ST3 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.35□□□□□ -2.47
SIN3AQ96ST3 RNA5SP451-201ENST00000410588 110 ntBASIC-0.35□□□□□ -2.47
SIN3AQ96ST3 RNU6-320P-201ENST00000516511 106 ntBASIC-0.35□□□□□ -2.47
SIN3AQ96ST3 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.35□□□□□ -2.47
SIN3AQ96ST3 MIR548BB-201ENST00000626714 66 ntBASIC-0.35□□□□□ -2.47
SIN3AQ96ST3 RNU6-208P-201ENST00000362431 107 ntBASIC-0.36□□□□□ -2.47
SIN3AQ96ST3 RNU6-592P-201ENST00000411333 103 ntBASIC-0.36□□□□□ -2.47
SIN3AQ96ST3 AC140658.3-201ENST00000567603 271 ntBASIC-0.36□□□□□ -2.47
SIN3AQ96ST3 AL590491.3-201ENST00000610731 82 ntBASIC-0.36□□□□□ -2.47
SIN3AQ96ST3 RNU6-502P-201ENST00000362419 108 ntBASIC-0.37□□□□□ -2.47
SIN3AQ96ST3 RNU6-624P-201ENST00000363411 107 ntBASIC-0.37□□□□□ -2.47
SIN3AQ96ST3 RNA5SP275-201ENST00000363936 118 ntBASIC-0.37□□□□□ -2.47
SIN3AQ96ST3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.37□□□□□ -2.47
SIN3AQ96ST3 RNU6-900P-201ENST00000384498 102 ntBASIC-0.37□□□□□ -2.47
SIN3AQ96ST3 RNU6-30P-201ENST00000384561 107 ntBASIC-0.37□□□□□ -2.47
SIN3AQ96ST3 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.37□□□□□ -2.47
SIN3AQ96ST3 SNORD77.2-201ENST00000391045 68 ntBASIC-0.37□□□□□ -2.47
SIN3AQ96ST3 RNU6-274P-201ENST00000459566 107 ntBASIC-0.37□□□□□ -2.47
SIN3AQ96ST3 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.38□□□□□ -2.47
SIN3AQ96ST3 SNORD95.1-201ENST00000364099 68 ntBASIC-0.38□□□□□ -2.47
SIN3AQ96ST3 RNU6-260P-201ENST00000384092 107 ntBASIC-0.38□□□□□ -2.47
SIN3AQ96ST3 AC021146.9-201ENST00000512503 156 ntBASIC-0.38□□□□□ -2.47
SIN3AQ96ST3 MIR4263-201ENST00000584745 83 ntBASIC-0.38□□□□□ -2.47
SIN3AQ96ST3 MIR6509-201ENST00000614603 85 ntBASIC-0.38□□□□□ -2.47
SIN3AQ96ST3 SNORD14C-201ENST00000365382 88 ntBASIC-0.39□□□□□ -2.47
SIN3AQ96ST3 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.39□□□□□ -2.47
SIN3AQ96ST3 MIR203A-201ENST00000384836 110 ntBASIC-0.39□□□□□ -2.47
SIN3AQ96ST3 AC096531.1-201ENST00000419107 107 ntBASIC-0.39□□□□□ -2.47
SIN3AQ96ST3 snoU13.13-201ENST00000458842 104 ntBASIC-0.39□□□□□ -2.47
SIN3AQ96ST3 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.39□□□□□ -2.47
SIN3AQ96ST3 RNU7-55P-201ENST00000459426 62 ntBASIC-0.39□□□□□ -2.47
SIN3AQ96ST3 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.39□□□□□ -2.47
SIN3AQ96ST3 RNU6-340P-201ENST00000364005 107 ntBASIC-0.4□□□□□ -2.47
SIN3AQ96ST3 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.4□□□□□ -2.47
SIN3AQ96ST3 RPS29P8-201ENST00000445109 171 ntBASIC-0.4□□□□□ -2.47
SIN3AQ96ST3 AL691482.2-201ENST00000457453 84 ntBASIC-0.4□□□□□ -2.47
SIN3AQ96ST3 MIR3657-201ENST00000584818 117 ntBASIC-0.4□□□□□ -2.47
SIN3AQ96ST3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.4□□□□□ -2.47
SIN3AQ96ST3 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.41□□□□□ -2.48
SIN3AQ96ST3 MIR224-201ENST00000384889 81 ntBASIC-0.41□□□□□ -2.48
SIN3AQ96ST3 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.41□□□□□ -2.48
SIN3AQ96ST3 MIR6773-201ENST00000612812 74 ntBASIC-0.41□□□□□ -2.48
SIN3AQ96ST3 MIR4788-201ENST00000639104 80 ntBASIC-0.41□□□□□ -2.48
SIN3AQ96ST3 SNORA2.1-201ENST00000363089 137 ntBASIC-0.42□□□□□ -2.48
SIN3AQ96ST3 RNU6-337P-201ENST00000391243 106 ntBASIC-0.42□□□□□ -2.48
SIN3AQ96ST3 RNY4P30-201ENST00000410216 95 ntBASIC-0.42□□□□□ -2.48
SIN3AQ96ST3 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
SIN3AQ96ST3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
SIN3AQ96ST3 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.43□□□□□ -2.48
SIN3AQ96ST3 RNA5SP147-201ENST00000516493 109 ntBASIC-0.43□□□□□ -2.48
SIN3AQ96ST3 YWHAEP3-201ENST00000582767 121 ntBASIC-0.43□□□□□ -2.48
SIN3AQ96ST3 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.44□□□□□ -2.48
SIN3AQ96ST3 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.44□□□□□ -2.48
SIN3AQ96ST3 SNORD56B-201ENST00000384713 71 ntBASIC-0.44□□□□□ -2.48
SIN3AQ96ST3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
SIN3AQ96ST3 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.44□□□□□ -2.48
SIN3AQ96ST3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.44□□□□□ -2.48
SIN3AQ96ST3 RNU6-752P-201ENST00000516376 102 ntBASIC-0.44□□□□□ -2.48
SIN3AQ96ST3 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.44□□□□□ -2.48
SIN3AQ96ST3 MIRLET7B-201ENST00000385140 83 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms