Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 MIR6828-201ENST00000636181 60 ntBASIC1.64□□□□□ -2.15
TREML4Q6UXN2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TREML4Q6UXN2 RNU6-910P-201ENST00000390844 107 ntBASIC1.63□□□□□ -2.15
TREML4Q6UXN2 HMGN2P22-201ENST00000427588 175 ntBASIC1.63□□□□□ -2.15
TREML4Q6UXN2 snoU13.9-201ENST00000458927 103 ntBASIC1.63□□□□□ -2.15
TREML4Q6UXN2 snoU13.18-201ENST00000459483 104 ntBASIC1.63□□□□□ -2.15
TREML4Q6UXN2 TRMT112P2-201ENST00000512910 132 ntBASIC1.63□□□□□ -2.15
TREML4Q6UXN2 RNA5SP182-201ENST00000516064 82 ntBASIC1.63□□□□□ -2.15
TREML4Q6UXN2 RNA5SP364-201ENST00000516938 78 ntBASIC1.63□□□□□ -2.15
TREML4Q6UXN2 SNORA70.25-201ENST00000612741 95 ntBASIC1.63□□□□□ -2.15
TREML4Q6UXN2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.63□□□□□ -2.15
TREML4Q6UXN2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TREML4Q6UXN2 SNORD79.1-201ENST00000516069 84 ntBASIC1.62□□□□□ -2.15
TREML4Q6UXN2 RNA5SP227-201ENST00000516184 113 ntBASIC1.62□□□□□ -2.15
TREML4Q6UXN2 RN7SKP88-201ENST00000516847 250 ntBASIC1.62□□□□□ -2.15
TREML4Q6UXN2 7SK.8-201ENST00000612110 250 ntBASIC1.62□□□□□ -2.15
TREML4Q6UXN2 7SK.13-201ENST00000622040 250 ntBASIC1.62□□□□□ -2.15
TREML4Q6UXN2 SNORD33-201ENST00000362761 85 ntBASIC1.61□□□□□ -2.15
TREML4Q6UXN2 SNORD89-201ENST00000390981 114 ntBASIC1.61□□□□□ -2.15
TREML4Q6UXN2 AC245884.12-201ENST00000615364 59 ntBASIC1.61□□□□□ -2.15
TREML4Q6UXN2 uc_338.20-201ENST00000621563 178 ntBASIC1.61□□□□□ -2.15
TREML4Q6UXN2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
TREML4Q6UXN2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
TREML4Q6UXN2 RNU6-361P-201ENST00000364454 107 ntBASIC1.6□□□□□ -2.15
TREML4Q6UXN2 RNU1-52P-201ENST00000384190 164 ntBASIC1.6□□□□□ -2.15
TREML4Q6UXN2 Y_RNA.519-201ENST00000384553 102 ntBASIC1.6□□□□□ -2.15
TREML4Q6UXN2 RNU6-1111P-201ENST00000391118 107 ntBASIC1.6□□□□□ -2.15
TREML4Q6UXN2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.6□□□□□ -2.15
TREML4Q6UXN2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.6□□□□□ -2.15
TREML4Q6UXN2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
TREML4Q6UXN2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TREML4Q6UXN2 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
TREML4Q6UXN2 RNA5SP190-201ENST00000365222 118 ntBASIC1.57□□□□□ -2.16
TREML4Q6UXN2 RNA5SP489-201ENST00000410986 109 ntBASIC1.57□□□□□ -2.16
TREML4Q6UXN2 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
TREML4Q6UXN2 SNORA27.2-201ENST00000363365 126 ntBASIC1.56□□□□□ -2.16
TREML4Q6UXN2 SNORD115-23-201ENST00000364461 82 ntBASIC1.56□□□□□ -2.16
TREML4Q6UXN2 SNORD114-29-201ENST00000364819 70 ntBASIC1.56□□□□□ -2.16
TREML4Q6UXN2 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
TREML4Q6UXN2 RNU6-175P-201ENST00000516896 107 ntBASIC1.56□□□□□ -2.16
TREML4Q6UXN2 RNY1P9-201ENST00000532431 109 ntBASIC1.56□□□□□ -2.16
TREML4Q6UXN2 MIR3612-201ENST00000579753 87 ntBASIC1.56□□□□□ -2.16
TREML4Q6UXN2 AC104408.1-201ENST00000605241 170 ntBASIC1.56□□□□□ -2.16
TREML4Q6UXN2 Y_RNA.783-201ENST00000613546 102 ntBASIC1.56□□□□□ -2.16
TREML4Q6UXN2 MIR6888-201ENST00000621977 67 ntBASIC1.56□□□□□ -2.16
TREML4Q6UXN2 SNORA36.1-201ENST00000363424 132 ntBASIC1.55□□□□□ -2.16
TREML4Q6UXN2 RNU1-124P-201ENST00000363861 145 ntBASIC1.55□□□□□ -2.16
TREML4Q6UXN2 SNORD105-201ENST00000386910 85 ntBASIC1.55□□□□□ -2.16
TREML4Q6UXN2 SNORD13-201ENST00000459299 104 ntBASIC1.55□□□□□ -2.16
TREML4Q6UXN2 MIR4752-201ENST00000579672 72 ntBASIC1.55□□□□□ -2.16
TREML4Q6UXN2 MIR202-201ENST00000362219 110 ntBASIC1.54□□□□□ -2.16
TREML4Q6UXN2 MIR520D-201ENST00000385002 87 ntBASIC1.54□□□□□ -2.16
TREML4Q6UXN2 RNU6-1238P-201ENST00000517215 102 ntBASIC1.54□□□□□ -2.16
TREML4Q6UXN2 MIR4464-201ENST00000580818 92 ntBASIC1.54□□□□□ -2.16
TREML4Q6UXN2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
TREML4Q6UXN2 AP1B1P2-201ENST00000416196 106 ntBASIC1.53□□□□□ -2.16
TREML4Q6UXN2 HMGN2P19-201ENST00000425149 265 ntBASIC1.53□□□□□ -2.16
TREML4Q6UXN2 Y_RNA.699-201ENST00000516803 93 ntBASIC1.53□□□□□ -2.16
TREML4Q6UXN2 RNA5SP268-201ENST00000516828 124 ntBASIC1.53□□□□□ -2.16
TREML4Q6UXN2 RNU7-188P-201ENST00000517063 64 ntBASIC1.53□□□□□ -2.16
TREML4Q6UXN2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
TREML4Q6UXN2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
TREML4Q6UXN2 Y_RNA.134-201ENST00000363435 105 ntBASIC1.52□□□□□ -2.17
TREML4Q6UXN2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
TREML4Q6UXN2 RNU6-1036P-201ENST00000383959 104 ntBASIC1.51□□□□□ -2.17
TREML4Q6UXN2 SNORD115.2-201ENST00000391126 59 ntBASIC1.51□□□□□ -2.17
TREML4Q6UXN2 SNORA17.4-201ENST00000391287 132 ntBASIC1.51□□□□□ -2.17
TREML4Q6UXN2 RNA5SP67-201ENST00000516422 131 ntBASIC1.51□□□□□ -2.17
TREML4Q6UXN2 BX248123.2-201ENST00000606318 124 ntBASIC1.51□□□□□ -2.17
TREML4Q6UXN2 MIR7107-201ENST00000611489 80 ntBASIC1.51□□□□□ -2.17
TREML4Q6UXN2 AC084768.2-201ENST00000622736 221 ntBASIC1.51□□□□□ -2.17
TREML4Q6UXN2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.51□□□□□ -2.17
TREML4Q6UXN2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TREML4Q6UXN2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TREML4Q6UXN2 MIR573-201ENST00000384964 99 ntBASIC1.5□□□□□ -2.17
TREML4Q6UXN2 SNORD23.1-201ENST00000408212 104 ntBASIC1.5□□□□□ -2.17
TREML4Q6UXN2 AL356379.1-201ENST00000414105 126 ntBASIC1.5□□□□□ -2.17
TREML4Q6UXN2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.5□□□□□ -2.17
TREML4Q6UXN2 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC1.5□□□□□ -2.17
TREML4Q6UXN2 AL445584.3-201ENST00000617173 78 ntBASIC1.5□□□□□ -2.17
TREML4Q6UXN2 MIR30A-201ENST00000385092 71 ntBASIC1.49□□□□□ -2.17
TREML4Q6UXN2 SNORA67.5-201ENST00000391036 107 ntBASIC1.49□□□□□ -2.17
TREML4Q6UXN2 RNY3P8-201ENST00000411366 126 ntBASIC1.49□□□□□ -2.17
TREML4Q6UXN2 RNU6-176P-201ENST00000517196 105 ntBASIC1.49□□□□□ -2.17
TREML4Q6UXN2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TREML4Q6UXN2 SNORA16.1-201ENST00000364597 132 ntBASIC1.48□□□□□ -2.17
TREML4Q6UXN2 Y_RNA.382-201ENST00000365672 114 ntBASIC1.48□□□□□ -2.17
TREML4Q6UXN2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.48□□□□□ -2.17
TREML4Q6UXN2 RNU1-29P-201ENST00000606574 126 ntBASIC1.48□□□□□ -2.17
TREML4Q6UXN2 Y_RNA.613-201ENST00000410726 97 ntBASIC1.47□□□□□ -2.17
TREML4Q6UXN2 AC002429.1-201ENST00000437672 148 ntBASIC1.47□□□□□ -2.17
TREML4Q6UXN2 SNORA70.22-201ENST00000517160 124 ntBASIC1.47□□□□□ -2.17
TREML4Q6UXN2 MIR17-201ENST00000385012 84 ntBASIC1.46□□□□□ -2.18
TREML4Q6UXN2 RNA5SP233-201ENST00000459153 113 ntBASIC1.46□□□□□ -2.18
TREML4Q6UXN2 MIR4419B-201ENST00000577260 68 ntBASIC1.46□□□□□ -2.18
TREML4Q6UXN2 RNU6-42P-201ENST00000384165 107 ntBASIC1.45□□□□□ -2.18
TREML4Q6UXN2 MIR548Q-201ENST00000408404 100 ntBASIC1.45□□□□□ -2.18
TREML4Q6UXN2 AC003989.2-201ENST00000440224 169 ntBASIC1.45□□□□□ -2.18
TREML4Q6UXN2 AC008834.1-201ENST00000511612 175 ntBASIC1.45□□□□□ -2.18
TREML4Q6UXN2 RNA5SP169-201ENST00000517268 117 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms