Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNU6-35P-201ENST00000384530 107 ntBASIC1.36□□□□□ -2.19
FOXR1Q6PIV2 SNORD99-201ENST00000408612 74 ntBASIC1.36□□□□□ -2.19
FOXR1Q6PIV2 SNORD116.2-201ENST00000391251 93 ntBASIC1.35□□□□□ -2.19
FOXR1Q6PIV2 RNU6-518P-201ENST00000516056 96 ntBASIC1.35□□□□□ -2.19
FOXR1Q6PIV2 RNA5SP220-201ENST00000516298 104 ntBASIC1.35□□□□□ -2.19
FOXR1Q6PIV2 SNORA40.16-201ENST00000517238 121 ntBASIC1.35□□□□□ -2.19
FOXR1Q6PIV2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
FOXR1Q6PIV2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
FOXR1Q6PIV2 SNORD114-22-201ENST00000365423 72 ntBASIC1.34□□□□□ -2.19
FOXR1Q6PIV2 HMGN2P22-201ENST00000427588 175 ntBASIC1.34□□□□□ -2.19
FOXR1Q6PIV2 RNA5SP94-201ENST00000516917 108 ntBASIC1.34□□□□□ -2.19
FOXR1Q6PIV2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.34□□□□□ -2.19
FOXR1Q6PIV2 Y_RNA.282-201ENST00000364793 102 ntBASIC1.33□□□□□ -2.2
FOXR1Q6PIV2 MIR519A2-201ENST00000384990 87 ntBASIC1.33□□□□□ -2.2
FOXR1Q6PIV2 MIR1255B2-201ENST00000408618 67 ntBASIC1.33□□□□□ -2.2
FOXR1Q6PIV2 RNU1-29P-201ENST00000606574 126 ntBASIC1.33□□□□□ -2.2
FOXR1Q6PIV2 Y_RNA.74-201ENST00000362911 99 ntBASIC1.32□□□□□ -2.2
FOXR1Q6PIV2 RNU7-119P-201ENST00000459279 63 ntBASIC1.32□□□□□ -2.2
FOXR1Q6PIV2 RNA5SP255-201ENST00000516370 107 ntBASIC1.32□□□□□ -2.2
FOXR1Q6PIV2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
FOXR1Q6PIV2 SNORD114-27-201ENST00000363766 70 ntBASIC1.31□□□□□ -2.2
FOXR1Q6PIV2 SNORD116-16-201ENST00000384533 92 ntBASIC1.31□□□□□ -2.2
FOXR1Q6PIV2 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.31□□□□□ -2.2
FOXR1Q6PIV2 AC243829.6-201ENST00000612652 106 ntBASIC1.31□□□□□ -2.2
FOXR1Q6PIV2 RNY1P8-201ENST00000383970 114 ntBASIC1.3□□□□□ -2.2
FOXR1Q6PIV2 MIR200A-201ENST00000384875 90 ntBASIC1.3□□□□□ -2.2
FOXR1Q6PIV2 AC025627.3-201ENST00000582078 182 ntBASIC1.3□□□□□ -2.2
FOXR1Q6PIV2 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
FOXR1Q6PIV2 RNU6-337P-201ENST00000391243 106 ntBASIC1.29□□□□□ -2.2
FOXR1Q6PIV2 AL021921.1-201ENST00000442774 93 ntBASIC1.29□□□□□ -2.2
FOXR1Q6PIV2 AC243829.3-201ENST00000622177 108 ntBASIC1.29□□□□□ -2.2
FOXR1Q6PIV2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
FOXR1Q6PIV2 RNU4-33P-201ENST00000364316 85 ntBASIC1.28□□□□□ -2.2
FOXR1Q6PIV2 MIR527-201ENST00000385244 85 ntBASIC1.28□□□□□ -2.2
FOXR1Q6PIV2 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
FOXR1Q6PIV2 RNA5SP404-201ENST00000517118 132 ntBASIC1.28□□□□□ -2.2
FOXR1Q6PIV2 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.28□□□□□ -2.2
FOXR1Q6PIV2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
FOXR1Q6PIV2 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
FOXR1Q6PIV2 MIR96-201ENST00000362288 78 ntBASIC1.26□□□□□ -2.21
FOXR1Q6PIV2 RNU6-810P-201ENST00000364001 107 ntBASIC1.26□□□□□ -2.21
FOXR1Q6PIV2 RNA5SP222-201ENST00000411039 105 ntBASIC1.26□□□□□ -2.21
FOXR1Q6PIV2 AC069271.1-201ENST00000445577 156 ntBASIC1.26□□□□□ -2.21
FOXR1Q6PIV2 MIR7110-201ENST00000612638 86 ntBASIC1.26□□□□□ -2.21
FOXR1Q6PIV2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.25□□□□□ -2.21
FOXR1Q6PIV2 SNORD114-24-201ENST00000365029 72 ntBASIC1.25□□□□□ -2.21
FOXR1Q6PIV2 SNORA49-201ENST00000386157 136 ntBASIC1.25□□□□□ -2.21
FOXR1Q6PIV2 MIR26B-201ENST00000362251 77 ntBASIC1.24□□□□□ -2.21
FOXR1Q6PIV2 SNORD1B-201ENST00000363091 84 ntBASIC1.24□□□□□ -2.21
FOXR1Q6PIV2 RNU6-1232P-201ENST00000516299 86 ntBASIC1.24□□□□□ -2.21
FOXR1Q6PIV2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
FOXR1Q6PIV2 Y_RNA.109-201ENST00000363215 102 ntBASIC1.23□□□□□ -2.21
FOXR1Q6PIV2 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
FOXR1Q6PIV2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.23□□□□□ -2.21
FOXR1Q6PIV2 RPS29P1-201ENST00000465274 159 ntBASIC1.23□□□□□ -2.21
FOXR1Q6PIV2 RNU6-930P-201ENST00000390938 100 ntBASIC1.22□□□□□ -2.21
FOXR1Q6PIV2 RNU6-172P-201ENST00000411000 93 ntBASIC1.22□□□□□ -2.21
FOXR1Q6PIV2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.22□□□□□ -2.21
FOXR1Q6PIV2 RNU1-124P-201ENST00000363861 145 ntBASIC1.21□□□□□ -2.22
FOXR1Q6PIV2 RNA5SP517-201ENST00000364724 117 ntBASIC1.21□□□□□ -2.22
FOXR1Q6PIV2 MIR520E-201ENST00000384867 87 ntBASIC1.21□□□□□ -2.22
FOXR1Q6PIV2 SNORA40B-201ENST00000385573 128 ntBASIC1.21□□□□□ -2.22
FOXR1Q6PIV2 AC244090.1-201ENST00000441884 93 ntBASIC1.21□□□□□ -2.22
FOXR1Q6PIV2 MIR548X-201ENST00000580069 75 ntBASIC1.21□□□□□ -2.22
FOXR1Q6PIV2 MIR6773-201ENST00000612812 74 ntBASIC1.21□□□□□ -2.22
FOXR1Q6PIV2 MIR6515-201ENST00000619843 57 ntBASIC1.21□□□□□ -2.22
FOXR1Q6PIV2 MIR20A-201ENST00000362279 71 ntBASIC1.2□□□□□ -2.22
FOXR1Q6PIV2 MIR4490-201ENST00000582647 84 ntBASIC1.2□□□□□ -2.22
FOXR1Q6PIV2 SNORA25.18-201ENST00000607153 114 ntBASIC1.2□□□□□ -2.22
FOXR1Q6PIV2 SNORD115-25-201ENST00000362619 82 ntBASIC1.19□□□□□ -2.22
FOXR1Q6PIV2 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
FOXR1Q6PIV2 MIR548F3-201ENST00000408509 87 ntBASIC1.19□□□□□ -2.22
FOXR1Q6PIV2 ACA64.5-201ENST00000516207 127 ntBASIC1.19□□□□□ -2.22
FOXR1Q6PIV2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
FOXR1Q6PIV2 RNU6-246P-201ENST00000384702 107 ntBASIC1.18□□□□□ -2.22
FOXR1Q6PIV2 RNU6-175P-201ENST00000516896 107 ntBASIC1.18□□□□□ -2.22
FOXR1Q6PIV2 RNU7-188P-201ENST00000517063 64 ntBASIC1.18□□□□□ -2.22
FOXR1Q6PIV2 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
FOXR1Q6PIV2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.17□□□□□ -2.22
FOXR1Q6PIV2 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
FOXR1Q6PIV2 SNORA36.2-201ENST00000384004 127 ntBASIC1.16□□□□□ -2.22
FOXR1Q6PIV2 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
FOXR1Q6PIV2 RNA5SP480-201ENST00000516840 109 ntBASIC1.16□□□□□ -2.22
FOXR1Q6PIV2 RNU1-93P-201ENST00000364704 169 ntBASIC1.15□□□□□ -2.23
FOXR1Q6PIV2 RNU4-45P-201ENST00000365469 141 ntBASIC1.15□□□□□ -2.23
FOXR1Q6PIV2 AL353765.1-201ENST00000605514 183 ntBASIC1.15□□□□□ -2.23
FOXR1Q6PIV2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.15□□□□□ -2.23
FOXR1Q6PIV2 MIR579-201ENST00000385221 98 ntBASIC1.14□□□□□ -2.23
FOXR1Q6PIV2 MIR5706-201ENST00000579841 80 ntBASIC1.14□□□□□ -2.23
FOXR1Q6PIV2 Y_RNA.423-201ENST00000384057 113 ntBASIC1.13□□□□□ -2.23
FOXR1Q6PIV2 RNU6-458P-201ENST00000384179 107 ntBASIC1.13□□□□□ -2.23
FOXR1Q6PIV2 RNU4-54P-201ENST00000516428 129 ntBASIC1.13□□□□□ -2.23
FOXR1Q6PIV2 U6.58-201ENST00000613107 107 ntBASIC1.13□□□□□ -2.23
FOXR1Q6PIV2 AC022709.1-201ENST00000615967 87 ntBASIC1.13□□□□□ -2.23
FOXR1Q6PIV2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
FOXR1Q6PIV2 MIRLET7B-201ENST00000385140 83 ntBASIC1.12□□□□□ -2.23
FOXR1Q6PIV2 RNU7-154P-201ENST00000516194 62 ntBASIC1.12□□□□□ -2.23
FOXR1Q6PIV2 RNU6-782P-201ENST00000516852 104 ntBASIC1.12□□□□□ -2.23
FOXR1Q6PIV2 RNU6-1223P-201ENST00000517124 104 ntBASIC1.12□□□□□ -2.23
FOXR1Q6PIV2 MIR151B-201ENST00000584249 96 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms