Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RNA5SP66-201ENST00000517178 101 ntBASIC-0.62□□□□□ -2.51
CCDC38Q502W7 AP001318.4-201ENST00000616637 121 ntBASIC-0.62□□□□□ -2.51
CCDC38Q502W7 SNORD126-201ENST00000459475 77 ntBASIC-0.63□□□□□ -2.51
CCDC38Q502W7 SNORA40.13-201ENST00000516379 120 ntBASIC-0.63□□□□□ -2.51
CCDC38Q502W7 RNU6-215P-201ENST00000365169 102 ntBASIC-0.64□□□□□ -2.51
CCDC38Q502W7 RNU6-382P-201ENST00000365181 106 ntBASIC-0.64□□□□□ -2.51
CCDC38Q502W7 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.64□□□□□ -2.51
CCDC38Q502W7 RNU7-55P-201ENST00000459426 62 ntBASIC-0.64□□□□□ -2.51
CCDC38Q502W7 MIR548AI-201ENST00000579940 88 ntBASIC-0.64□□□□□ -2.51
CCDC38Q502W7 MIR548AZ-201ENST00000616567 95 ntBASIC-0.64□□□□□ -2.51
CCDC38Q502W7 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
CCDC38Q502W7 snoU13.17-201ENST00000458802 104 ntBASIC-0.65□□□□□ -2.51
CCDC38Q502W7 RNU6-919P-201ENST00000516731 104 ntBASIC-0.65□□□□□ -2.51
CCDC38Q502W7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.65□□□□□ -2.51
CCDC38Q502W7 RNU6-502P-201ENST00000362419 108 ntBASIC-0.66□□□□□ -2.52
CCDC38Q502W7 RNU6-901P-201ENST00000384593 106 ntBASIC-0.66□□□□□ -2.52
CCDC38Q502W7 RNU6-824P-201ENST00000363724 104 ntBASIC-0.67□□□□□ -2.52
CCDC38Q502W7 SNORD20-201ENST00000384550 80 ntBASIC-0.67□□□□□ -2.52
CCDC38Q502W7 MIR519C-201ENST00000385053 87 ntBASIC-0.67□□□□□ -2.52
CCDC38Q502W7 MIR4773-1-201ENST00000637203 78 ntBASIC-0.67□□□□□ -2.52
CCDC38Q502W7 RNU6-990P-201ENST00000364385 104 ntBASIC-0.68□□□□□ -2.52
CCDC38Q502W7 RNU7-153P-201ENST00000516455 62 ntBASIC-0.68□□□□□ -2.52
CCDC38Q502W7 uc_338.36-201ENST00000622331 158 ntBASIC-0.68□□□□□ -2.52
CCDC38Q502W7 RNU6-32P-201ENST00000383948 107 ntBASIC-0.69□□□□□ -2.52
CCDC38Q502W7 RNU6-13P-201ENST00000384248 107 ntBASIC-0.69□□□□□ -2.52
CCDC38Q502W7 RNU6-12P-201ENST00000384604 107 ntBASIC-0.69□□□□□ -2.52
CCDC38Q502W7 RNU6-41P-201ENST00000384741 107 ntBASIC-0.69□□□□□ -2.52
CCDC38Q502W7 snoU13.13-201ENST00000458842 104 ntBASIC-0.69□□□□□ -2.52
CCDC38Q502W7 AC093726.3-201ENST00000637588 150 ntBASIC-0.69□□□□□ -2.52
CCDC38Q502W7 SNORD114-11-201ENST00000363738 75 ntBASIC-0.7□□□□□ -2.52
CCDC38Q502W7 U6.81-201ENST00000612550 106 ntBASIC-0.7□□□□□ -2.52
CCDC38Q502W7 MALAT1.1-201ENST00000618249 95 ntBASIC-0.7□□□□□ -2.52
CCDC38Q502W7 SNORA63.4-201ENST00000362763 126 ntBASIC-0.71□□□□□ -2.52
CCDC38Q502W7 SNORD115-27-201ENST00000364430 82 ntBASIC-0.71□□□□□ -2.52
CCDC38Q502W7 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.71□□□□□ -2.52
CCDC38Q502W7 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.71□□□□□ -2.52
CCDC38Q502W7 SNORD56B-201ENST00000384713 71 ntBASIC-0.71□□□□□ -2.52
CCDC38Q502W7 RNU6-274P-201ENST00000459566 107 ntBASIC-0.71□□□□□ -2.52
CCDC38Q502W7 AC021146.9-201ENST00000512503 156 ntBASIC-0.71□□□□□ -2.52
CCDC38Q502W7 RNA5SP67-201ENST00000516422 131 ntBASIC-0.71□□□□□ -2.52
CCDC38Q502W7 MIR4668-201ENST00000582284 70 ntBASIC-0.71□□□□□ -2.52
CCDC38Q502W7 RNU6-633P-201ENST00000362612 103 ntBASIC-0.72□□□□□ -2.52
CCDC38Q502W7 RNU6-973P-201ENST00000364690 107 ntBASIC-0.72□□□□□ -2.52
CCDC38Q502W7 RNU6-260P-201ENST00000384092 107 ntBASIC-0.72□□□□□ -2.52
CCDC38Q502W7 SNORD75.1-201ENST00000408373 60 ntBASIC-0.72□□□□□ -2.52
CCDC38Q502W7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.72□□□□□ -2.52
CCDC38Q502W7 MIR6773-201ENST00000612812 74 ntBASIC-0.72□□□□□ -2.52
CCDC38Q502W7 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.73□□□□□ -2.53
CCDC38Q502W7 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.73□□□□□ -2.53
CCDC38Q502W7 MIR196A2-201ENST00000385189 110 ntBASIC-0.73□□□□□ -2.53
CCDC38Q502W7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
CCDC38Q502W7 AL035461.1-201ENST00000421490 332 ntBASIC-0.73□□□□□ -2.53
CCDC38Q502W7 AL445193.1-201ENST00000441183 141 ntBASIC-0.73□□□□□ -2.53
CCDC38Q502W7 AL450471.1-201ENST00000447509 127 ntBASIC-0.73□□□□□ -2.53
CCDC38Q502W7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.73□□□□□ -2.53
CCDC38Q502W7 SNORD115-37-201ENST00000363768 82 ntBASIC-0.74□□□□□ -2.53
CCDC38Q502W7 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.74□□□□□ -2.53
CCDC38Q502W7 RNU6-147P-201ENST00000383983 107 ntBASIC-0.74□□□□□ -2.53
CCDC38Q502W7 SNORD116-22-201ENST00000384430 92 ntBASIC-0.74□□□□□ -2.53
CCDC38Q502W7 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.74□□□□□ -2.53
CCDC38Q502W7 RNU4-63P-201ENST00000411313 118 ntBASIC-0.74□□□□□ -2.53
CCDC38Q502W7 RNU6-592P-201ENST00000411333 103 ntBASIC-0.74□□□□□ -2.53
CCDC38Q502W7 AL691482.2-201ENST00000457453 84 ntBASIC-0.74□□□□□ -2.53
CCDC38Q502W7 MIR6509-201ENST00000614603 85 ntBASIC-0.74□□□□□ -2.53
CCDC38Q502W7 AL391099.1-201ENST00000624635 187 ntBASIC-0.74□□□□□ -2.53
CCDC38Q502W7 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.75□□□□□ -2.53
CCDC38Q502W7 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.75□□□□□ -2.53
CCDC38Q502W7 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.75□□□□□ -2.53
CCDC38Q502W7 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.75□□□□□ -2.53
CCDC38Q502W7 MIR4280-201ENST00000582178 76 ntBASIC-0.75□□□□□ -2.53
CCDC38Q502W7 U2.22-201ENST00000636441 106 ntBASIC-0.75□□□□□ -2.53
CCDC38Q502W7 MIR4432-201ENST00000581823 84 ntBASIC-0.76□□□□□ -2.53
CCDC38Q502W7 RNU6-208P-201ENST00000362431 107 ntBASIC-0.77□□□□□ -2.53
CCDC38Q502W7 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.77□□□□□ -2.53
CCDC38Q502W7 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.77□□□□□ -2.53
CCDC38Q502W7 RNU6-284P-201ENST00000411105 106 ntBASIC-0.77□□□□□ -2.53
CCDC38Q502W7 SNORA2.1-201ENST00000363089 137 ntBASIC-0.78□□□□□ -2.53
CCDC38Q502W7 MIRLET7B-201ENST00000385140 83 ntBASIC-0.78□□□□□ -2.53
CCDC38Q502W7 snoR1.1-201ENST00000628177 80 ntBASIC-0.78□□□□□ -2.53
CCDC38Q502W7 U6.96-201ENST00000636425 70 ntBASIC-0.78□□□□□ -2.53
CCDC38Q502W7 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.79□□□□□ -2.54
CCDC38Q502W7 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.79□□□□□ -2.54
CCDC38Q502W7 SNORD77.2-201ENST00000391045 68 ntBASIC-0.79□□□□□ -2.54
CCDC38Q502W7 RNU6-337P-201ENST00000391243 106 ntBASIC-0.79□□□□□ -2.54
CCDC38Q502W7 AC114755.3-201ENST00000481111 251 ntBASIC-0.79□□□□□ -2.54
CCDC38Q502W7 RNU6-752P-201ENST00000516376 102 ntBASIC-0.79□□□□□ -2.54
CCDC38Q502W7 MIR3657-201ENST00000584818 117 ntBASIC-0.79□□□□□ -2.54
CCDC38Q502W7 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.79□□□□□ -2.54
CCDC38Q502W7 MIR6851-201ENST00000617060 67 ntBASIC-0.79□□□□□ -2.54
CCDC38Q502W7 MIR203A-201ENST00000384836 110 ntBASIC-0.8□□□□□ -2.54
CCDC38Q502W7 MT-TQ-201ENST00000387372 72 ntBASIC-0.8□□□□□ -2.54
CCDC38Q502W7 MIR3681-201ENST00000580089 72 ntBASIC-0.8□□□□□ -2.54
CCDC38Q502W7 RNU6-640P-201ENST00000363693 105 ntBASIC-0.81□□□□□ -2.54
CCDC38Q502W7 RNU6-681P-201ENST00000364012 104 ntBASIC-0.81□□□□□ -2.54
CCDC38Q502W7 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.81□□□□□ -2.54
CCDC38Q502W7 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.81□□□□□ -2.54
CCDC38Q502W7 MIR204-201ENST00000385200 110 ntBASIC-0.81□□□□□ -2.54
CCDC38Q502W7 AC093729.1-201ENST00000513074 128 ntBASIC-0.81□□□□□ -2.54
CCDC38Q502W7 MIR548AX-201ENST00000580117 73 ntBASIC-0.81□□□□□ -2.54
CCDC38Q502W7 RNU6-905P-201ENST00000384434 107 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 248.6 ms