Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 MIR494-201ENST00000349529 81 ntBASIC0.1□□□□□ -2.39
PTCHD3Q3KNS1 MIR329-2-201ENST00000385029 84 ntBASIC0.1□□□□□ -2.39
PTCHD3Q3KNS1 SNORD2-201ENST00000459163 69 ntBASIC0.1□□□□□ -2.39
PTCHD3Q3KNS1 AC022137.1-201ENST00000483735 151 ntBASIC0.1□□□□□ -2.39
PTCHD3Q3KNS1 RNU6-180P-201ENST00000516697 61 ntBASIC0.1□□□□□ -2.39
PTCHD3Q3KNS1 RNU6-340P-201ENST00000364005 107 ntBASIC0.09□□□□□ -2.4
PTCHD3Q3KNS1 SNORD73B-201ENST00000364394 72 ntBASIC0.09□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-686P-201ENST00000364839 107 ntBASIC0.09□□□□□ -2.4
PTCHD3Q3KNS1 MIR106A-201ENST00000384870 81 ntBASIC0.09□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-762P-201ENST00000517107 102 ntBASIC0.09□□□□□ -2.4
PTCHD3Q3KNS1 MIR4773-1-201ENST00000637203 78 ntBASIC0.09□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-35P-201ENST00000384530 107 ntBASIC0.08□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-1152P-201ENST00000384576 107 ntBASIC0.08□□□□□ -2.4
PTCHD3Q3KNS1 MIR145-201ENST00000384967 88 ntBASIC0.08□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-274P-201ENST00000459566 107 ntBASIC0.08□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-1108P-201ENST00000516308 104 ntBASIC0.08□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-752P-201ENST00000516376 102 ntBASIC0.08□□□□□ -2.4
PTCHD3Q3KNS1 CR383656.4-201ENST00000546909 122 ntBASIC0.08□□□□□ -2.4
PTCHD3Q3KNS1 Y_RNA.12-201ENST00000362393 112 ntBASIC0.07□□□□□ -2.4
PTCHD3Q3KNS1 AC062037.1-201ENST00000605302 128 ntBASIC0.07□□□□□ -2.4
PTCHD3Q3KNS1 RN7SL660P-201ENST00000614852 299 ntBASIC0.07□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-1276P-201ENST00000365372 104 ntBASIC0.06□□□□□ -2.4
PTCHD3Q3KNS1 Y_RNA.371-201ENST00000365591 113 ntBASIC0.06□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-1039P-201ENST00000383931 107 ntBASIC0.06□□□□□ -2.4
PTCHD3Q3KNS1 RNU7-165P-201ENST00000458864 60 ntBASIC0.06□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-175P-201ENST00000516896 107 ntBASIC0.06□□□□□ -2.4
PTCHD3Q3KNS1 MIRLET7A1-201ENST00000362295 80 ntBASIC0.05□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-315P-201ENST00000362666 107 ntBASIC0.05□□□□□ -2.4
PTCHD3Q3KNS1 MIR593-201ENST00000384856 100 ntBASIC0.05□□□□□ -2.4
PTCHD3Q3KNS1 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.05□□□□□ -2.4
PTCHD3Q3KNS1 MIR1302-4-201ENST00000408701 150 ntBASIC0.05□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-380P-201ENST00000410207 107 ntBASIC0.05□□□□□ -2.4
PTCHD3Q3KNS1 MIR5190-201ENST00000581537 80 ntBASIC0.05□□□□□ -2.4
PTCHD3Q3KNS1 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
PTCHD3Q3KNS1 MIR148A-201ENST00000362215 68 ntBASIC0.04□□□□□ -2.4
PTCHD3Q3KNS1 SNORD114-5-201ENST00000362928 70 ntBASIC0.04□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-478P-201ENST00000363904 110 ntBASIC0.04□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-260P-201ENST00000384092 107 ntBASIC0.04□□□□□ -2.4
PTCHD3Q3KNS1 RNA5SP163-201ENST00000410304 99 ntBASIC0.04□□□□□ -2.4
PTCHD3Q3KNS1 AL691482.2-201ENST00000457453 84 ntBASIC0.04□□□□□ -2.4
PTCHD3Q3KNS1 RNU7-159P-201ENST00000459284 62 ntBASIC0.04□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-303P-201ENST00000517091 106 ntBASIC0.04□□□□□ -2.4
PTCHD3Q3KNS1 MIR4666B-201ENST00000578142 81 ntBASIC0.04□□□□□ -2.4
PTCHD3Q3KNS1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
PTCHD3Q3KNS1 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
PTCHD3Q3KNS1 Y_RNA.185-201ENST00000363894 100 ntBASIC0.03□□□□□ -2.4
PTCHD3Q3KNS1 Y_RNA.316-201ENST00000365118 111 ntBASIC0.03□□□□□ -2.4
PTCHD3Q3KNS1 RNU6-302P-201ENST00000365249 107 ntBASIC0.02□□□□□ -2.41
PTCHD3Q3KNS1 MIR548E-201ENST00000408287 88 ntBASIC0.02□□□□□ -2.41
PTCHD3Q3KNS1 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
PTCHD3Q3KNS1 MIR6509-201ENST00000614603 85 ntBASIC0.02□□□□□ -2.41
PTCHD3Q3KNS1 MIR6514-201ENST00000622549 70 ntBASIC0.02□□□□□ -2.41
PTCHD3Q3KNS1 Y_RNA.250-201ENST00000364542 110 ntBASIC0.01□□□□□ -2.41
PTCHD3Q3KNS1 SNORA26.2-201ENST00000390922 122 ntBASIC0.01□□□□□ -2.41
PTCHD3Q3KNS1 MIR1265-201ENST00000408444 86 ntBASIC0.01□□□□□ -2.41
PTCHD3Q3KNS1 AC104692.1-201ENST00000472406 90 ntBASIC0.01□□□□□ -2.41
PTCHD3Q3KNS1 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.01□□□□□ -2.41
PTCHD3Q3KNS1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.01□□□□□ -2.41
PTCHD3Q3KNS1 MIR1297-201ENST00000637311 77 ntBASIC0.01□□□□□ -2.41
PTCHD3Q3KNS1 RNA5SP98-201ENST00000363158 137 ntBASIC0□□□□□ -2.41
PTCHD3Q3KNS1 MIR582-201ENST00000365731 98 ntBASIC0□□□□□ -2.41
PTCHD3Q3KNS1 RNY4P29-201ENST00000410801 97 ntBASIC0□□□□□ -2.41
PTCHD3Q3KNS1 MIR1245B-201ENST00000636115 69 ntBASIC0□□□□□ -2.41
PTCHD3Q3KNS1 MIR6086-201ENST00000638065 55 ntBASIC0□□□□□ -2.41
PTCHD3Q3KNS1 MIR6759-201ENST00000638110 65 ntBASIC0□□□□□ -2.41
PTCHD3Q3KNS1 AC074348.1-201ENST00000426503 132 ntBASIC-0.01□□□□□ -2.41
PTCHD3Q3KNS1 MIR1295B-201ENST00000636144 60 ntBASIC-0.01□□□□□ -2.41
PTCHD3Q3KNS1 SNORA2.1-201ENST00000363089 137 ntBASIC-0.02□□□□□ -2.41
PTCHD3Q3KNS1 SNORA63.6-201ENST00000364921 119 ntBASIC-0.02□□□□□ -2.41
PTCHD3Q3KNS1 RNU6-46P-201ENST00000383860 107 ntBASIC-0.02□□□□□ -2.41
PTCHD3Q3KNS1 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.02□□□□□ -2.41
PTCHD3Q3KNS1 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.03□□□□□ -2.41
PTCHD3Q3KNS1 RNU6-990P-201ENST00000364385 104 ntBASIC-0.03□□□□□ -2.41
PTCHD3Q3KNS1 RNU6-807P-201ENST00000516805 107 ntBASIC-0.03□□□□□ -2.41
PTCHD3Q3KNS1 MIR5589-201ENST00000579442 60 ntBASIC-0.03□□□□□ -2.41
PTCHD3Q3KNS1 MIR3657-201ENST00000584818 117 ntBASIC-0.03□□□□□ -2.41
PTCHD3Q3KNS1 RNU6-929P-201ENST00000384429 107 ntBASIC-0.04□□□□□ -2.42
PTCHD3Q3KNS1 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.04□□□□□ -2.42
PTCHD3Q3KNS1 MIR4679-1-201ENST00000637619 75 ntBASIC-0.04□□□□□ -2.42
PTCHD3Q3KNS1 SNORD114-31-201ENST00000363219 75 ntBASIC-0.05□□□□□ -2.42
PTCHD3Q3KNS1 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.05□□□□□ -2.42
PTCHD3Q3KNS1 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.05□□□□□ -2.42
PTCHD3Q3KNS1 SNORA49-201ENST00000386157 136 ntBASIC-0.05□□□□□ -2.42
PTCHD3Q3KNS1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
PTCHD3Q3KNS1 IGLVI-20-201ENST00000519296 130 ntBASIC-0.05□□□□□ -2.42
PTCHD3Q3KNS1 MIR4636-201ENST00000582271 80 ntBASIC-0.05□□□□□ -2.42
PTCHD3Q3KNS1 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.06□□□□□ -2.42
PTCHD3Q3KNS1 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.06□□□□□ -2.42
PTCHD3Q3KNS1 SNORA40.17-201ENST00000517256 115 ntBASIC-0.06□□□□□ -2.42
PTCHD3Q3KNS1 MIR4712-201ENST00000583750 82 ntBASIC-0.06□□□□□ -2.42
PTCHD3Q3KNS1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.06□□□□□ -2.42
PTCHD3Q3KNS1 MIR3202-2-201ENST00000635980 79 ntBASIC-0.06□□□□□ -2.42
PTCHD3Q3KNS1 RNU6-787P-201ENST00000384032 107 ntBASIC-0.07□□□□□ -2.42
PTCHD3Q3KNS1 HAR1A.1-201ENST00000459583 118 ntBASIC-0.07□□□□□ -2.42
PTCHD3Q3KNS1 AC021146.9-201ENST00000512503 156 ntBASIC-0.07□□□□□ -2.42
PTCHD3Q3KNS1 MIR203A-201ENST00000384836 110 ntBASIC-0.08□□□□□ -2.42
PTCHD3Q3KNS1 RNA5SP476-201ENST00000516613 103 ntBASIC-0.08□□□□□ -2.42
PTCHD3Q3KNS1 MIR3675-201ENST00000583661 73 ntBASIC-0.08□□□□□ -2.42
PTCHD3Q3KNS1 MIR6507-201ENST00000613630 70 ntBASIC-0.08□□□□□ -2.42
PTCHD3Q3KNS1 SNORD115-25-201ENST00000362619 82 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms