Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RNU6-172P-201ENST00000411000 93 ntBASIC1.45□□□□□ -2.18
RSPO4Q2I0M5 AL162376.1-201ENST00000624117 175 ntBASIC1.45□□□□□ -2.18
RSPO4Q2I0M5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
RSPO4Q2I0M5 SNORD1B-201ENST00000363091 84 ntBASIC1.44□□□□□ -2.18
RSPO4Q2I0M5 RNU6-724P-201ENST00000390958 105 ntBASIC1.44□□□□□ -2.18
RSPO4Q2I0M5 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.44□□□□□ -2.18
RSPO4Q2I0M5 MIR4490-201ENST00000582647 84 ntBASIC1.44□□□□□ -2.18
RSPO4Q2I0M5 MIR548AE1-201ENST00000583292 70 ntBASIC1.44□□□□□ -2.18
RSPO4Q2I0M5 AC090617.8-201ENST00000623339 167 ntBASIC1.44□□□□□ -2.18
RSPO4Q2I0M5 MIR519A2-201ENST00000384990 87 ntBASIC1.43□□□□□ -2.18
RSPO4Q2I0M5 MIR516B1-201ENST00000385211 90 ntBASIC1.43□□□□□ -2.18
RSPO4Q2I0M5 SCARNA16.5-201ENST00000517114 183 ntBASIC1.43□□□□□ -2.18
RSPO4Q2I0M5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.42□□□□□ -2.18
RSPO4Q2I0M5 MIR3678-201ENST00000578455 94 ntBASIC1.42□□□□□ -2.18
RSPO4Q2I0M5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RSPO4Q2I0M5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
RSPO4Q2I0M5 Y_RNA.68-201ENST00000362881 102 ntBASIC1.41□□□□□ -2.18
RSPO4Q2I0M5 MIR1255B2-201ENST00000408618 67 ntBASIC1.41□□□□□ -2.18
RSPO4Q2I0M5 U7.7-201ENST00000459276 60 ntBASIC1.41□□□□□ -2.18
RSPO4Q2I0M5 MIR4473-201ENST00000583731 91 ntBASIC1.41□□□□□ -2.18
RSPO4Q2I0M5 MIR216A-201ENST00000385063 110 ntBASIC1.4□□□□□ -2.19
RSPO4Q2I0M5 SNORD12-201ENST00000391002 90 ntBASIC1.4□□□□□ -2.19
RSPO4Q2I0M5 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
RSPO4Q2I0M5 SNORA70.22-201ENST00000517160 124 ntBASIC1.4□□□□□ -2.19
RSPO4Q2I0M5 AC243829.6-201ENST00000612652 106 ntBASIC1.4□□□□□ -2.19
RSPO4Q2I0M5 AC243829.3-201ENST00000622177 108 ntBASIC1.4□□□□□ -2.19
RSPO4Q2I0M5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.39□□□□□ -2.19
RSPO4Q2I0M5 RNU6-1110P-201ENST00000516462 101 ntBASIC1.39□□□□□ -2.19
RSPO4Q2I0M5 AC012493.3-201ENST00000604494 112 ntBASIC1.39□□□□□ -2.19
RSPO4Q2I0M5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
RSPO4Q2I0M5 RNU6-986P-201ENST00000363133 102 ntBASIC1.38□□□□□ -2.19
RSPO4Q2I0M5 SNORD105-201ENST00000386910 85 ntBASIC1.38□□□□□ -2.19
RSPO4Q2I0M5 SNORD89-201ENST00000390981 114 ntBASIC1.38□□□□□ -2.19
RSPO4Q2I0M5 MIR1304-201ENST00000408243 91 ntBASIC1.38□□□□□ -2.19
RSPO4Q2I0M5 AC006210.1-201ENST00000424882 111 ntBASIC1.38□□□□□ -2.19
RSPO4Q2I0M5 MIR548AG1-201ENST00000579932 66 ntBASIC1.38□□□□□ -2.19
RSPO4Q2I0M5 RNU6-924P-201ENST00000362926 108 ntBASIC1.37□□□□□ -2.19
RSPO4Q2I0M5 Y_RNA.109-201ENST00000363215 102 ntBASIC1.37□□□□□ -2.19
RSPO4Q2I0M5 SNORD110-201ENST00000408189 75 ntBASIC1.37□□□□□ -2.19
RSPO4Q2I0M5 AC002429.1-201ENST00000437672 148 ntBASIC1.37□□□□□ -2.19
RSPO4Q2I0M5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.37□□□□□ -2.19
RSPO4Q2I0M5 MIR6828-201ENST00000636181 60 ntBASIC1.37□□□□□ -2.19
RSPO4Q2I0M5 MIR6767-201ENST00000637302 66 ntBASIC1.36□□□□□ -2.19
RSPO4Q2I0M5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
RSPO4Q2I0M5 MIR429-201ENST00000362106 83 ntBASIC1.35□□□□□ -2.19
RSPO4Q2I0M5 MIR548AL-201ENST00000578416 97 ntBASIC1.35□□□□□ -2.19
RSPO4Q2I0M5 MIR3612-201ENST00000579753 87 ntBASIC1.35□□□□□ -2.19
RSPO4Q2I0M5 Y_RNA.433-201ENST00000384089 102 ntBASIC1.34□□□□□ -2.19
RSPO4Q2I0M5 MIR573-201ENST00000384964 99 ntBASIC1.34□□□□□ -2.19
RSPO4Q2I0M5 RNU6-696P-201ENST00000390834 107 ntBASIC1.34□□□□□ -2.19
RSPO4Q2I0M5 RNA5SP227-201ENST00000516184 113 ntBASIC1.34□□□□□ -2.19
RSPO4Q2I0M5 RNU7-154P-201ENST00000516194 62 ntBASIC1.34□□□□□ -2.19
RSPO4Q2I0M5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RSPO4Q2I0M5 MIR222-201ENST00000384992 110 ntBASIC1.33□□□□□ -2.2
RSPO4Q2I0M5 MIR3122-201ENST00000577243 73 ntBASIC1.33□□□□□ -2.2
RSPO4Q2I0M5 RNU6-1206P-201ENST00000516339 103 ntBASIC1.32□□□□□ -2.2
RSPO4Q2I0M5 RNU7-160P-201ENST00000516660 62 ntBASIC1.32□□□□□ -2.2
RSPO4Q2I0M5 SNORD115-25-201ENST00000362619 82 ntBASIC1.31□□□□□ -2.2
RSPO4Q2I0M5 RNA5SP457-201ENST00000363657 124 ntBASIC1.31□□□□□ -2.2
RSPO4Q2I0M5 RNU6-458P-201ENST00000384179 107 ntBASIC1.31□□□□□ -2.2
RSPO4Q2I0M5 MIR579-201ENST00000385221 98 ntBASIC1.31□□□□□ -2.2
RSPO4Q2I0M5 MIR320A-201ENST00000385302 82 ntBASIC1.31□□□□□ -2.2
RSPO4Q2I0M5 FABP5P4-201ENST00000437203 171 ntBASIC1.31□□□□□ -2.2
RSPO4Q2I0M5 MIR5000-201ENST00000577717 103 ntBASIC1.31□□□□□ -2.2
RSPO4Q2I0M5 U6.58-201ENST00000613107 107 ntBASIC1.31□□□□□ -2.2
RSPO4Q2I0M5 RNU6-337P-201ENST00000391243 106 ntBASIC1.3□□□□□ -2.2
RSPO4Q2I0M5 AC244090.1-201ENST00000441884 93 ntBASIC1.3□□□□□ -2.2
RSPO4Q2I0M5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.3□□□□□ -2.2
RSPO4Q2I0M5 AC025627.3-201ENST00000582078 182 ntBASIC1.3□□□□□ -2.2
RSPO4Q2I0M5 MIR20A-201ENST00000362279 71 ntBASIC1.29□□□□□ -2.2
RSPO4Q2I0M5 Y_RNA.69-201ENST00000362885 109 ntBASIC1.29□□□□□ -2.2
RSPO4Q2I0M5 MIR193B-201ENST00000384907 83 ntBASIC1.29□□□□□ -2.2
RSPO4Q2I0M5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.29□□□□□ -2.2
RSPO4Q2I0M5 SNORA36.1-201ENST00000363424 132 ntBASIC1.28□□□□□ -2.2
RSPO4Q2I0M5 RNA5SP470-201ENST00000516463 106 ntBASIC1.28□□□□□ -2.2
RSPO4Q2I0M5 RNU7-151P-201ENST00000516930 53 ntBASIC1.28□□□□□ -2.2
RSPO4Q2I0M5 MIR1273G-201ENST00000577677 100 ntBASIC1.28□□□□□ -2.2
RSPO4Q2I0M5 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
RSPO4Q2I0M5 SNORD2-201ENST00000459163 69 ntBASIC1.27□□□□□ -2.21
RSPO4Q2I0M5 RNA5SP268-201ENST00000516828 124 ntBASIC1.27□□□□□ -2.21
RSPO4Q2I0M5 SNORA70.25-201ENST00000612741 95 ntBASIC1.27□□□□□ -2.21
RSPO4Q2I0M5 MIR6773-201ENST00000612812 74 ntBASIC1.27□□□□□ -2.21
RSPO4Q2I0M5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
RSPO4Q2I0M5 SNORA25-201ENST00000384384 134 ntBASIC1.26□□□□□ -2.21
RSPO4Q2I0M5 HMGN2P22-201ENST00000427588 175 ntBASIC1.26□□□□□ -2.21
RSPO4Q2I0M5 MIR7107-201ENST00000611489 80 ntBASIC1.26□□□□□ -2.21
RSPO4Q2I0M5 U2.18-201ENST00000622185 84 ntBASIC1.26□□□□□ -2.21
RSPO4Q2I0M5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.26□□□□□ -2.21
RSPO4Q2I0M5 Y_RNA.115-201ENST00000363272 98 ntBASIC1.25□□□□□ -2.21
RSPO4Q2I0M5 RNU6-598P-201ENST00000364017 105 ntBASIC1.25□□□□□ -2.21
RSPO4Q2I0M5 MIR329-2-201ENST00000385029 84 ntBASIC1.25□□□□□ -2.21
RSPO4Q2I0M5 U6.103-201ENST00000637085 61 ntBASIC1.25□□□□□ -2.21
RSPO4Q2I0M5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
RSPO4Q2I0M5 RNU6-1204P-201ENST00000363948 107 ntBASIC1.24□□□□□ -2.21
RSPO4Q2I0M5 AL451105.1-201ENST00000450005 189 ntBASIC1.24□□□□□ -2.21
RSPO4Q2I0M5 MIR4295-201ENST00000585286 85 ntBASIC1.24□□□□□ -2.21
RSPO4Q2I0M5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RSPO4Q2I0M5 AC087343.1-201ENST00000477341 475 ntBASIC1.23□□□□□ -2.21
RSPO4Q2I0M5 RNA5SP476-201ENST00000516613 103 ntBASIC1.23□□□□□ -2.21
RSPO4Q2I0M5 AL590095.2-201ENST00000604136 117 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms