Protein–RNA interactions for Protein: Q15042

RAB3GAP1, Rab3 GTPase-activating protein catalytic subunit, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1Q15042 snoU13.13-201ENST00000458842 104 ntBASIC0.86□□□□□ -2.27
RAB3GAP1Q15042 SCARNA17.3-201ENST00000516381 125 ntBASIC0.86□□□□□ -2.27
RAB3GAP1Q15042 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
RAB3GAP1Q15042 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
RAB3GAP1Q15042 MIR582-201ENST00000365731 98 ntBASIC0.85□□□□□ -2.27
RAB3GAP1Q15042 MIR9-2-201ENST00000384838 87 ntBASIC0.85□□□□□ -2.27
RAB3GAP1Q15042 HMGN2P22-201ENST00000427588 175 ntBASIC0.85□□□□□ -2.27
RAB3GAP1Q15042 AC069271.1-201ENST00000445577 156 ntBASIC0.85□□□□□ -2.27
RAB3GAP1Q15042 SNORA25.18-201ENST00000607153 114 ntBASIC0.85□□□□□ -2.27
RAB3GAP1Q15042 Y_RNA.250-201ENST00000364542 110 ntBASIC0.84□□□□□ -2.27
RAB3GAP1Q15042 Y_RNA.375-201ENST00000365625 101 ntBASIC0.84□□□□□ -2.27
RAB3GAP1Q15042 MIR216A-201ENST00000385063 110 ntBASIC0.84□□□□□ -2.27
RAB3GAP1Q15042 RN7SL793P-201ENST00000583259 296 ntBASIC0.84□□□□□ -2.27
RAB3GAP1Q15042 AC092634.7-201ENST00000621022 103 ntBASIC0.84□□□□□ -2.27
RAB3GAP1Q15042 AC103706.3-201ENST00000636297 85 ntBASIC0.84□□□□□ -2.27
RAB3GAP1Q15042 SNORD118-201ENST00000363593 134 ntBASIC0.83□□□□□ -2.28
RAB3GAP1Q15042 Y_RNA.633-201ENST00000459107 95 ntBASIC0.83□□□□□ -2.28
RAB3GAP1Q15042 MIR548E-201ENST00000408287 88 ntBASIC0.82□□□□□ -2.28
RAB3GAP1Q15042 MIR5706-201ENST00000579841 80 ntBASIC0.82□□□□□ -2.28
RAB3GAP1Q15042 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
RAB3GAP1Q15042 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.82□□□□□ -2.28
RAB3GAP1Q15042 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.82□□□□□ -2.28
RAB3GAP1Q15042 MIR521-2-201ENST00000384818 87 ntBASIC0.81□□□□□ -2.28
RAB3GAP1Q15042 AC021146.9-201ENST00000512503 156 ntBASIC0.81□□□□□ -2.28
RAB3GAP1Q15042 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
RAB3GAP1Q15042 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
RAB3GAP1Q15042 SNORA40.8-201ENST00000411034 126 ntBASIC0.8□□□□□ -2.28
RAB3GAP1Q15042 SNORA63.6-201ENST00000364921 119 ntBASIC0.79□□□□□ -2.28
RAB3GAP1Q15042 RNU6-1162P-201ENST00000384443 104 ntBASIC0.79□□□□□ -2.28
RAB3GAP1Q15042 AL157398.1-201ENST00000452981 186 ntBASIC0.79□□□□□ -2.28
RAB3GAP1Q15042 RNU4-54P-201ENST00000516428 129 ntBASIC0.79□□□□□ -2.28
RAB3GAP1Q15042 MIR6513-201ENST00000621188 64 ntBASIC0.79□□□□□ -2.28
RAB3GAP1Q15042 RNU6-110P-201ENST00000384508 104 ntBASIC0.78□□□□□ -2.28
RAB3GAP1Q15042 AC110620.1-201ENST00000416042 228 ntBASIC0.78□□□□□ -2.28
RAB3GAP1Q15042 RNU6-1232P-201ENST00000516299 86 ntBASIC0.78□□□□□ -2.28
RAB3GAP1Q15042 RNU6-542P-201ENST00000516405 103 ntBASIC0.78□□□□□ -2.28
RAB3GAP1Q15042 RNU6-1089P-201ENST00000516473 104 ntBASIC0.78□□□□□ -2.28
RAB3GAP1Q15042 uc_338.10-201ENST00000621872 182 ntBASIC0.78□□□□□ -2.28
RAB3GAP1Q15042 Y_RNA.125-201ENST00000363371 111 ntBASIC0.77□□□□□ -2.29
RAB3GAP1Q15042 SNORA33.1-201ENST00000364957 130 ntBASIC0.77□□□□□ -2.29
RAB3GAP1Q15042 RNU6-669P-201ENST00000365575 107 ntBASIC0.76□□□□□ -2.29
RAB3GAP1Q15042 MIR518A1-201ENST00000385068 85 ntBASIC0.76□□□□□ -2.29
RAB3GAP1Q15042 MIR6755-201ENST00000619993 66 ntBASIC0.76□□□□□ -2.29
RAB3GAP1Q15042 RNA5SP215-201ENST00000363440 122 ntBASIC0.75□□□□□ -2.29
RAB3GAP1Q15042 SNORA15B-2-201ENST00000384058 135 ntBASIC0.75□□□□□ -2.29
RAB3GAP1Q15042 SNORA15B-1-201ENST00000384334 135 ntBASIC0.75□□□□□ -2.29
RAB3GAP1Q15042 RNA5SP299-201ENST00000391203 116 ntBASIC0.75□□□□□ -2.29
RAB3GAP1Q15042 SNORA2A-201ENST00000383885 135 ntBASIC0.74□□□□□ -2.29
RAB3GAP1Q15042 MIR936-201ENST00000401264 98 ntBASIC0.74□□□□□ -2.29
RAB3GAP1Q15042 Y_RNA.423-201ENST00000384057 113 ntBASIC0.73□□□□□ -2.29
RAB3GAP1Q15042 MIR193B-201ENST00000384907 83 ntBASIC0.73□□□□□ -2.29
RAB3GAP1Q15042 SNORD71-201ENST00000411292 86 ntBASIC0.73□□□□□ -2.29
RAB3GAP1Q15042 AC098934.3-201ENST00000430450 190 ntBASIC0.73□□□□□ -2.29
RAB3GAP1Q15042 RNU6-229P-201ENST00000516614 102 ntBASIC0.73□□□□□ -2.29
RAB3GAP1Q15042 U2.7-201ENST00000619197 100 ntBASIC0.73□□□□□ -2.29
RAB3GAP1Q15042 RNA5SP347-201ENST00000362445 119 ntBASIC0.72□□□□□ -2.29
RAB3GAP1Q15042 SCARNA21.1-201ENST00000515996 128 ntBASIC0.72□□□□□ -2.29
RAB3GAP1Q15042 MIR20A-201ENST00000362279 71 ntBASIC0.71□□□□□ -2.3
RAB3GAP1Q15042 MIR501-201ENST00000390204 84 ntBASIC0.71□□□□□ -2.3
RAB3GAP1Q15042 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
RAB3GAP1Q15042 AC244090.1-201ENST00000441884 93 ntBASIC0.71□□□□□ -2.3
RAB3GAP1Q15042 MIR516B1-201ENST00000385211 90 ntBASIC0.7□□□□□ -2.3
RAB3GAP1Q15042 MIR92A1-201ENST00000385233 78 ntBASIC0.7□□□□□ -2.3
RAB3GAP1Q15042 MIR1273G-201ENST00000577677 100 ntBASIC0.7□□□□□ -2.3
RAB3GAP1Q15042 MIR4677-201ENST00000584153 80 ntBASIC0.7□□□□□ -2.3
RAB3GAP1Q15042 SNORA25.5-201ENST00000363782 126 ntBASIC0.69□□□□□ -2.3
RAB3GAP1Q15042 RNA5SP499-201ENST00000363982 119 ntBASIC0.69□□□□□ -2.3
RAB3GAP1Q15042 RNU6-848P-201ENST00000515948 107 ntBASIC0.69□□□□□ -2.3
RAB3GAP1Q15042 RNU6-617P-201ENST00000516147 107 ntBASIC0.69□□□□□ -2.3
RAB3GAP1Q15042 RNU6-473P-201ENST00000516164 107 ntBASIC0.69□□□□□ -2.3
RAB3GAP1Q15042 RNU7-174P-201ENST00000516248 59 ntBASIC0.69□□□□□ -2.3
RAB3GAP1Q15042 RNU6-1049P-201ENST00000516414 107 ntBASIC0.69□□□□□ -2.3
RAB3GAP1Q15042 MIR548V-201ENST00000584165 80 ntBASIC0.69□□□□□ -2.3
RAB3GAP1Q15042 U7.6-201ENST00000610841 64 ntBASIC0.69□□□□□ -2.3
RAB3GAP1Q15042 MIR548C-201ENST00000384815 97 ntBASIC0.68□□□□□ -2.3
RAB3GAP1Q15042 AC090617.8-201ENST00000623339 167 ntBASIC0.68□□□□□ -2.3
RAB3GAP1Q15042 SNORD114-23-201ENST00000363536 72 ntBASIC0.67□□□□□ -2.3
RAB3GAP1Q15042 RNA5SP192-201ENST00000364404 120 ntBASIC0.67□□□□□ -2.3
RAB3GAP1Q15042 SNORA49-201ENST00000386157 136 ntBASIC0.67□□□□□ -2.3
RAB3GAP1Q15042 MIR760-201ENST00000390220 80 ntBASIC0.67□□□□□ -2.3
RAB3GAP1Q15042 RNA5SP193-201ENST00000410353 107 ntBASIC0.67□□□□□ -2.3
RAB3GAP1Q15042 RNU6-175P-201ENST00000516896 107 ntBASIC0.67□□□□□ -2.3
RAB3GAP1Q15042 RNU7-188P-201ENST00000517063 64 ntBASIC0.67□□□□□ -2.3
RAB3GAP1Q15042 MIR4711-201ENST00000578274 70 ntBASIC0.67□□□□□ -2.3
RAB3GAP1Q15042 MIR548AD-201ENST00000584780 82 ntBASIC0.67□□□□□ -2.3
RAB3GAP1Q15042 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
RAB3GAP1Q15042 SNORD114-29-201ENST00000364819 70 ntBASIC0.66□□□□□ -2.3
RAB3GAP1Q15042 RNU6-499P-201ENST00000365615 107 ntBASIC0.66□□□□□ -2.3
RAB3GAP1Q15042 RNU6-945P-201ENST00000383947 107 ntBASIC0.66□□□□□ -2.3
RAB3GAP1Q15042 MIR630-201ENST00000384957 97 ntBASIC0.66□□□□□ -2.3
RAB3GAP1Q15042 AC243829.3-201ENST00000622177 108 ntBASIC0.66□□□□□ -2.3
RAB3GAP1Q15042 U6.96-201ENST00000636425 70 ntBASIC0.66□□□□□ -2.3
RAB3GAP1Q15042 RNU6-302P-201ENST00000365249 107 ntBASIC0.65□□□□□ -2.31
RAB3GAP1Q15042 MIR517B-201ENST00000385102 67 ntBASIC0.65□□□□□ -2.31
RAB3GAP1Q15042 CYP3A54P-201ENST00000566950 75 ntBASIC0.65□□□□□ -2.31
RAB3GAP1Q15042 AC243829.6-201ENST00000612652 106 ntBASIC0.65□□□□□ -2.31
RAB3GAP1Q15042 U4.4-201ENST00000620626 117 ntBASIC0.65□□□□□ -2.31
RAB3GAP1Q15042 SNORD44.1-201ENST00000363202 61 ntBASIC0.64□□□□□ -2.31
RAB3GAP1Q15042 RNU6-698P-201ENST00000363523 107 ntBASIC0.64□□□□□ -2.31
RAB3GAP1Q15042 RNU6-34P-201ENST00000364874 107 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms