Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 AC002429.1-201ENST00000437672 148 ntBASIC1.88□□□□□ -2.11
EMP3P54852 RNA5SP268-201ENST00000516828 124 ntBASIC1.88□□□□□ -2.11
EMP3P54852 SNORD114-29-201ENST00000364819 70 ntBASIC1.87□□□□□ -2.11
EMP3P54852 RNU6-175P-201ENST00000516896 107 ntBASIC1.87□□□□□ -2.11
EMP3P54852 Y_RNA.783-201ENST00000613546 102 ntBASIC1.87□□□□□ -2.11
EMP3P54852 SNORD115-23-201ENST00000364461 82 ntBASIC1.86□□□□□ -2.11
EMP3P54852 RNU1-78P-201ENST00000391248 165 ntBASIC1.86□□□□□ -2.11
EMP3P54852 RNU1-29P-201ENST00000606574 126 ntBASIC1.86□□□□□ -2.11
EMP3P54852 MIR7843-201ENST00000622274 79 ntBASIC1.86□□□□□ -2.11
EMP3P54852 MIR4426-201ENST00000640330 63 ntBASIC1.86□□□□□ -2.11
EMP3P54852 MIR504-201ENST00000385065 83 ntBASIC1.85□□□□□ -2.11
EMP3P54852 RNU7-188P-201ENST00000517063 64 ntBASIC1.85□□□□□ -2.11
EMP3P54852 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
EMP3P54852 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
EMP3P54852 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
EMP3P54852 RNU6-258P-201ENST00000390884 101 ntBASIC1.83□□□□□ -2.12
EMP3P54852 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
EMP3P54852 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
EMP3P54852 MIR1289-2-201ENST00000408360 111 ntBASIC1.82□□□□□ -2.12
EMP3P54852 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.82□□□□□ -2.12
EMP3P54852 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
EMP3P54852 MIR1468-201ENST00000410600 86 ntBASIC1.81□□□□□ -2.12
EMP3P54852 AL096840.1-201ENST00000603287 93 ntBASIC1.81□□□□□ -2.12
EMP3P54852 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
EMP3P54852 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.8□□□□□ -2.12
EMP3P54852 MIR3198-2-201ENST00000577868 80 ntBASIC1.8□□□□□ -2.12
EMP3P54852 MIR4422-201ENST00000581938 83 ntBASIC1.8□□□□□ -2.12
EMP3P54852 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
EMP3P54852 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
EMP3P54852 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
EMP3P54852 RNU6-1036P-201ENST00000383959 104 ntBASIC1.79□□□□□ -2.12
EMP3P54852 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
EMP3P54852 MIR5706-201ENST00000579841 80 ntBASIC1.79□□□□□ -2.12
EMP3P54852 MIR6888-201ENST00000621977 67 ntBASIC1.79□□□□□ -2.12
EMP3P54852 RNU6-1111P-201ENST00000391118 107 ntBASIC1.78□□□□□ -2.12
EMP3P54852 RNU6-295P-201ENST00000516901 104 ntBASIC1.78□□□□□ -2.12
EMP3P54852 MIR4464-201ENST00000580818 92 ntBASIC1.78□□□□□ -2.12
EMP3P54852 MIR4524B-201ENST00000581569 115 ntBASIC1.78□□□□□ -2.12
EMP3P54852 AC104408.1-201ENST00000605241 170 ntBASIC1.78□□□□□ -2.12
EMP3P54852 MIR222-201ENST00000384992 110 ntBASIC1.77□□□□□ -2.13
EMP3P54852 FABP5P4-201ENST00000437203 171 ntBASIC1.77□□□□□ -2.13
EMP3P54852 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
EMP3P54852 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
EMP3P54852 MIR18A-201ENST00000362310 71 ntBASIC1.76□□□□□ -2.13
EMP3P54852 MIR4255-201ENST00000579351 72 ntBASIC1.76□□□□□ -2.13
EMP3P54852 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
EMP3P54852 snoU13.23-201ENST00000458863 104 ntBASIC1.75□□□□□ -2.13
EMP3P54852 RNU6-300P-201ENST00000459080 104 ntBASIC1.75□□□□□ -2.13
EMP3P54852 MIR6845-201ENST00000613182 61 ntBASIC1.75□□□□□ -2.13
EMP3P54852 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.73□□□□□ -2.13
EMP3P54852 RNA5SP363-201ENST00000365072 115 ntBASIC1.73□□□□□ -2.13
EMP3P54852 MIR764-201ENST00000390811 85 ntBASIC1.73□□□□□ -2.13
EMP3P54852 AL445584.3-201ENST00000617173 78 ntBASIC1.73□□□□□ -2.13
EMP3P54852 SNORA16.1-201ENST00000364597 132 ntBASIC1.72□□□□□ -2.13
EMP3P54852 MIR9-3-201ENST00000385084 90 ntBASIC1.72□□□□□ -2.13
EMP3P54852 MIR676-201ENST00000390702 67 ntBASIC1.72□□□□□ -2.13
EMP3P54852 RNU6-1238P-201ENST00000517215 102 ntBASIC1.72□□□□□ -2.13
EMP3P54852 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.72□□□□□ -2.13
EMP3P54852 MIR4769-201ENST00000584126 77 ntBASIC1.72□□□□□ -2.13
EMP3P54852 RNU6-361P-201ENST00000364454 107 ntBASIC1.71□□□□□ -2.14
EMP3P54852 MIR520D-201ENST00000385002 87 ntBASIC1.71□□□□□ -2.14
EMP3P54852 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.71□□□□□ -2.14
EMP3P54852 SNORA27.2-201ENST00000363365 126 ntBASIC1.69□□□□□ -2.14
EMP3P54852 SNORA25-201ENST00000384384 134 ntBASIC1.69□□□□□ -2.14
EMP3P54852 AC084768.2-201ENST00000622736 221 ntBASIC1.69□□□□□ -2.14
EMP3P54852 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
EMP3P54852 RNA5SP99-201ENST00000364020 114 ntBASIC1.67□□□□□ -2.14
EMP3P54852 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
EMP3P54852 MIR548T-201ENST00000408369 74 ntBASIC1.67□□□□□ -2.14
EMP3P54852 AC003989.2-201ENST00000440224 169 ntBASIC1.67□□□□□ -2.14
EMP3P54852 MIR202-201ENST00000362219 110 ntBASIC1.66□□□□□ -2.14
EMP3P54852 RNU6-1091P-201ENST00000363945 107 ntBASIC1.66□□□□□ -2.14
EMP3P54852 Y_RNA.613-201ENST00000410726 97 ntBASIC1.66□□□□□ -2.14
EMP3P54852 RNU6-237P-201ENST00000515985 71 ntBASIC1.66□□□□□ -2.14
EMP3P54852 Y_RNA.699-201ENST00000516803 93 ntBASIC1.66□□□□□ -2.14
EMP3P54852 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
EMP3P54852 RNU4-45P-201ENST00000365469 141 ntBASIC1.65□□□□□ -2.15
EMP3P54852 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
EMP3P54852 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.65□□□□□ -2.15
EMP3P54852 AC069271.1-201ENST00000445577 156 ntBASIC1.65□□□□□ -2.15
EMP3P54852 RN7SL660P-201ENST00000614852 299 ntBASIC1.65□□□□□ -2.15
EMP3P54852 AL353997.5-201ENST00000618886 171 ntBASIC1.65□□□□□ -2.15
EMP3P54852 snoR1.1-201ENST00000628177 80 ntBASIC1.65□□□□□ -2.15
EMP3P54852 RNU6-732P-201ENST00000516033 103 ntBASIC1.64□□□□□ -2.15
EMP3P54852 SNORA25.15-201ENST00000516487 89 ntBASIC1.64□□□□□ -2.15
EMP3P54852 AC011195.1-201ENST00000578177 177 ntBASIC1.64□□□□□ -2.15
EMP3P54852 MIR502-201ENST00000606349 86 ntBASIC1.64□□□□□ -2.15
EMP3P54852 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
EMP3P54852 MIR19B1-201ENST00000384829 87 ntBASIC1.63□□□□□ -2.15
EMP3P54852 RNU6-482P-201ENST00000391068 107 ntBASIC1.63□□□□□ -2.15
EMP3P54852 SNORD124-201ENST00000459577 104 ntBASIC1.63□□□□□ -2.15
EMP3P54852 RNY1P9-201ENST00000532431 109 ntBASIC1.63□□□□□ -2.15
EMP3P54852 AP000676.1-201ENST00000533307 52 ntBASIC1.63□□□□□ -2.15
EMP3P54852 MIR4677-201ENST00000584153 80 ntBASIC1.63□□□□□ -2.15
EMP3P54852 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
EMP3P54852 SNORA67.5-201ENST00000391036 107 ntBASIC1.62□□□□□ -2.15
EMP3P54852 RNU6-1232P-201ENST00000516299 86 ntBASIC1.62□□□□□ -2.15
EMP3P54852 U7.6-201ENST00000610841 64 ntBASIC1.62□□□□□ -2.15
EMP3P54852 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
EMP3P54852 RNA5SP327-201ENST00000362494 101 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms