Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 SNORD114-28-201ENST00000363610 72 ntBASIC-0.38□□□□□ -2.47
LIG4P49917 RNU6-260P-201ENST00000384092 107 ntBASIC-0.38□□□□□ -2.47
LIG4P49917 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
LIG4P49917 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
LIG4P49917 MIR548M-201ENST00000408260 86 ntBASIC-0.38□□□□□ -2.47
LIG4P49917 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.38□□□□□ -2.47
LIG4P49917 RNU6-479P-201ENST00000516348 105 ntBASIC-0.38□□□□□ -2.47
LIG4P49917 MIR450A1-201ENST00000362262 91 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 RNU6-219P-201ENST00000364728 107 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 SNORA33.1-201ENST00000364957 130 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 MIR488-201ENST00000365739 83 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 SNORA32.3-201ENST00000384772 121 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 MIR1302-5-201ENST00000408164 150 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 RPS29P8-201ENST00000445109 171 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 MIR548AG1-201ENST00000579932 66 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 YWHAEP3-201ENST00000582767 121 ntBASIC-0.39□□□□□ -2.47
LIG4P49917 RNU6-640P-201ENST00000363693 105 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 MTATP6P29-201ENST00000415057 132 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 SNORD2-201ENST00000459163 69 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.4□□□□□ -2.47
LIG4P49917 AC021146.9-201ENST00000512503 156 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 SNORD22.1-201ENST00000516331 125 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 RNA5SP147-201ENST00000516493 109 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 RNU6-267P-201ENST00000516714 103 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 MIR8064-201ENST00000612863 90 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 MIR6854-201ENST00000614935 69 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 AP001318.4-201ENST00000616637 121 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 MIR6888-201ENST00000621977 67 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 MIR4773-1-201ENST00000637203 78 ntBASIC-0.4□□□□□ -2.47
LIG4P49917 RNU6-633P-201ENST00000362612 103 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 RNU6-624P-201ENST00000363411 107 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 RNU6-755P-201ENST00000364400 103 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 SNORA3B-201ENST00000391305 131 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.41□□□□□ -2.48
LIG4P49917 MIR4493-201ENST00000584016 73 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
LIG4P49917 MIR6509-201ENST00000614603 85 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 MIR548AZ-201ENST00000616567 95 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 MIR6086-201ENST00000638065 55 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 AC132825.6-201ENST00000638861 357 ntBASIC-0.41□□□□□ -2.48
LIG4P49917 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 RNU6-340P-201ENST00000364005 107 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 RNU6-901P-201ENST00000384593 106 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 MIR1236-201ENST00000408340 102 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 AC006254.2-201ENST00000603259 279 ntBASIC-0.42□□□□□ -2.48
LIG4P49917 SNORA2.1-201ENST00000363089 137 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 RNU6-215P-201ENST00000365169 102 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 MIR518B-201ENST00000385127 83 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 RNU2-51P-201ENST00000410708 197 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 CYP3A54P-201ENST00000566950 75 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 AC140658.3-201ENST00000567603 271 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 MIR4668-201ENST00000582284 70 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 AL353803.5-201ENST00000599815 141 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 AL445584.3-201ENST00000617173 78 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 MIR6739-201ENST00000622461 75 ntBASIC-0.43□□□□□ -2.48
LIG4P49917 RNU6-330P-201ENST00000363015 107 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 RNY4P3-201ENST00000365254 95 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 SNORD75.1-201ENST00000408373 60 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 MIR1255B2-201ENST00000408618 67 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 RNU6-758P-201ENST00000516292 89 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 MIR3179-1-201ENST00000578940 84 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 MIR3179-2-201ENST00000579107 84 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 MIR3179-3-201ENST00000579566 84 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 MIR3179-4-201ENST00000617599 84 ntBASIC-0.44□□□□□ -2.48
LIG4P49917 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.44□□□□□ -2.48
LIG4P49917 MIR101-1-201ENST00000362265 75 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 SNORA63.4-201ENST00000362763 126 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNU6-478P-201ENST00000363904 110 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNA5SP368-201ENST00000364298 116 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNU6-431P-201ENST00000383874 107 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 SNORD20-201ENST00000384550 80 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNY1P7-201ENST00000384743 110 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 MIR604-201ENST00000384880 94 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 MIR519C-201ENST00000385053 87 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 Z95118.1-201ENST00000421372 247 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNU6-313P-201ENST00000516317 112 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNU6-656P-201ENST00000516785 107 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNU6-881P-201ENST00000516813 102 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 MALAT1.1-201ENST00000618249 95 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 U6.96-201ENST00000636425 70 ntBASIC-0.45□□□□□ -2.48
LIG4P49917 RNU6-208P-201ENST00000362431 107 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 RNU5F-1-201ENST00000362507 117 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 RNU6-147P-201ENST00000383983 107 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 248.5 ms