Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 RNA5SP330-201ENST00000517096 96 ntBASIC0.97□□□□□ -2.25
CTGFP29279 SNORA9.1-201ENST00000362412 131 ntBASIC0.96□□□□□ -2.26
CTGFP29279 RNA5SP117-201ENST00000365294 118 ntBASIC0.96□□□□□ -2.26
CTGFP29279 MT-TY-201ENST00000387409 66 ntBASIC0.96□□□□□ -2.26
CTGFP29279 RNU6-269P-201ENST00000391077 97 ntBASIC0.96□□□□□ -2.26
CTGFP29279 SNORD113-2-201ENST00000391082 72 ntBASIC0.96□□□□□ -2.26
CTGFP29279 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.96□□□□□ -2.26
CTGFP29279 AC067863.3-201ENST00000624172 122 ntBASIC0.96□□□□□ -2.26
CTGFP29279 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.95□□□□□ -2.26
CTGFP29279 RNA5SP215-201ENST00000363440 122 ntBASIC0.94□□□□□ -2.26
CTGFP29279 RNU1-141P-201ENST00000364623 158 ntBASIC0.94□□□□□ -2.26
CTGFP29279 RNU6-726P-201ENST00000364680 107 ntBASIC0.94□□□□□ -2.26
CTGFP29279 SNORD28-201ENST00000384706 75 ntBASIC0.94□□□□□ -2.26
CTGFP29279 RNU6-808P-201ENST00000391233 108 ntBASIC0.94□□□□□ -2.26
CTGFP29279 AC002350.1-201ENST00000490759 375 ntBASIC0.94□□□□□ -2.26
CTGFP29279 MIR4460-201ENST00000577862 86 ntBASIC0.94□□□□□ -2.26
CTGFP29279 SNORD18A-201ENST00000363753 72 ntBASIC0.93□□□□□ -2.26
CTGFP29279 MIR652-201ENST00000385278 98 ntBASIC0.93□□□□□ -2.26
CTGFP29279 SNORD41.1-201ENST00000391000 69 ntBASIC0.93□□□□□ -2.26
CTGFP29279 RNU6-980P-201ENST00000516925 103 ntBASIC0.93□□□□□ -2.26
CTGFP29279 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.92□□□□□ -2.26
CTGFP29279 Y_RNA.125-201ENST00000363371 111 ntBASIC0.92□□□□□ -2.26
CTGFP29279 MIR521-2-201ENST00000384818 87 ntBASIC0.92□□□□□ -2.26
CTGFP29279 MIR573-201ENST00000384964 99 ntBASIC0.92□□□□□ -2.26
CTGFP29279 AC021146.9-201ENST00000512503 156 ntBASIC0.92□□□□□ -2.26
CTGFP29279 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
CTGFP29279 MIR4473-201ENST00000583731 91 ntBASIC0.92□□□□□ -2.26
CTGFP29279 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.92□□□□□ -2.26
CTGFP29279 Y_RNA.379-201ENST00000365653 102 ntBASIC0.91□□□□□ -2.26
CTGFP29279 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CTGFP29279 MIR517B-201ENST00000385102 67 ntBASIC0.91□□□□□ -2.26
CTGFP29279 Y_RNA.633-201ENST00000459107 95 ntBASIC0.91□□□□□ -2.26
CTGFP29279 MIR4752-201ENST00000579672 72 ntBASIC0.91□□□□□ -2.26
CTGFP29279 SNORD114-23-201ENST00000363536 72 ntBASIC0.9□□□□□ -2.27
CTGFP29279 Y_RNA.174-201ENST00000363781 105 ntBASIC0.9□□□□□ -2.27
CTGFP29279 MIR548E-201ENST00000408287 88 ntBASIC0.9□□□□□ -2.27
CTGFP29279 MIR548L-201ENST00000408303 86 ntBASIC0.9□□□□□ -2.27
CTGFP29279 RNA5SP47-201ENST00000517230 109 ntBASIC0.9□□□□□ -2.27
CTGFP29279 SNORA40.16-201ENST00000517238 121 ntBASIC0.9□□□□□ -2.27
CTGFP29279 MIR3678-201ENST00000578455 94 ntBASIC0.9□□□□□ -2.27
CTGFP29279 RNU6-698P-201ENST00000363523 107 ntBASIC0.89□□□□□ -2.27
CTGFP29279 RNU6-34P-201ENST00000364874 107 ntBASIC0.89□□□□□ -2.27
CTGFP29279 MIR508-201ENST00000384857 115 ntBASIC0.89□□□□□ -2.27
CTGFP29279 SNORD116.2-201ENST00000391251 93 ntBASIC0.89□□□□□ -2.27
CTGFP29279 SNORD99-201ENST00000408612 74 ntBASIC0.89□□□□□ -2.27
CTGFP29279 OR2A41P-201ENST00000473586 105 ntBASIC0.89□□□□□ -2.27
CTGFP29279 MIR4711-201ENST00000578274 70 ntBASIC0.89□□□□□ -2.27
CTGFP29279 MIR6835-201ENST00000621552 64 ntBASIC0.89□□□□□ -2.27
CTGFP29279 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.89□□□□□ -2.27
CTGFP29279 AC010487.4-201ENST00000637027 61 ntBASIC0.89□□□□□ -2.27
CTGFP29279 SNORA36.1-201ENST00000363424 132 ntBASIC0.88□□□□□ -2.27
CTGFP29279 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CTGFP29279 RNU6-231P-201ENST00000517122 103 ntBASIC0.88□□□□□ -2.27
CTGFP29279 AL353765.1-201ENST00000605514 183 ntBASIC0.88□□□□□ -2.27
CTGFP29279 SNORA70.25-201ENST00000612741 95 ntBASIC0.88□□□□□ -2.27
CTGFP29279 Y_RNA.68-201ENST00000362881 102 ntBASIC0.87□□□□□ -2.27
CTGFP29279 RNY1P8-201ENST00000383970 114 ntBASIC0.87□□□□□ -2.27
CTGFP29279 RNU6-1162P-201ENST00000384443 104 ntBASIC0.87□□□□□ -2.27
CTGFP29279 MIR3612-201ENST00000579753 87 ntBASIC0.87□□□□□ -2.27
CTGFP29279 MIR4639-201ENST00000584938 69 ntBASIC0.87□□□□□ -2.27
CTGFP29279 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.87□□□□□ -2.27
CTGFP29279 MIR924-201ENST00000638017 53 ntBASIC0.87□□□□□ -2.27
CTGFP29279 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CTGFP29279 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CTGFP29279 Y_RNA.246-201ENST00000364495 108 ntBASIC0.86□□□□□ -2.27
CTGFP29279 RNA5SP121-201ENST00000516537 101 ntBASIC0.86□□□□□ -2.27
CTGFP29279 AC011195.1-201ENST00000578177 177 ntBASIC0.86□□□□□ -2.27
CTGFP29279 AC103810.9-201ENST00000606688 112 ntBASIC0.86□□□□□ -2.27
CTGFP29279 RNU6-810P-201ENST00000364001 107 ntBASIC0.85□□□□□ -2.27
CTGFP29279 RNU6-302P-201ENST00000365249 107 ntBASIC0.85□□□□□ -2.27
CTGFP29279 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
CTGFP29279 RNU6-135P-201ENST00000516769 101 ntBASIC0.85□□□□□ -2.27
CTGFP29279 CYP3A54P-201ENST00000566950 75 ntBASIC0.85□□□□□ -2.27
CTGFP29279 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
CTGFP29279 RNU4-45P-201ENST00000365469 141 ntBASIC0.84□□□□□ -2.27
CTGFP29279 MIR519A2-201ENST00000384990 87 ntBASIC0.84□□□□□ -2.27
CTGFP29279 MIR516B1-201ENST00000385211 90 ntBASIC0.84□□□□□ -2.27
CTGFP29279 MIR216B-201ENST00000390186 82 ntBASIC0.84□□□□□ -2.27
CTGFP29279 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
CTGFP29279 RNU6-518P-201ENST00000516056 96 ntBASIC0.84□□□□□ -2.27
CTGFP29279 RNU6-469P-201ENST00000516253 101 ntBASIC0.84□□□□□ -2.27
CTGFP29279 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.84□□□□□ -2.27
CTGFP29279 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.84□□□□□ -2.27
CTGFP29279 RNA5SP499-201ENST00000363982 119 ntBASIC0.83□□□□□ -2.28
CTGFP29279 Y_RNA.282-201ENST00000364793 102 ntBASIC0.83□□□□□ -2.28
CTGFP29279 SNORA63.6-201ENST00000364921 119 ntBASIC0.83□□□□□ -2.28
CTGFP29279 MIR545-201ENST00000385085 106 ntBASIC0.83□□□□□ -2.28
CTGFP29279 MIR548F3-201ENST00000408509 87 ntBASIC0.83□□□□□ -2.28
CTGFP29279 SCARNA17.3-201ENST00000516381 125 ntBASIC0.83□□□□□ -2.28
CTGFP29279 RNU1-29P-201ENST00000606574 126 ntBASIC0.83□□□□□ -2.28
CTGFP29279 AL162376.1-201ENST00000624117 175 ntBASIC0.83□□□□□ -2.28
CTGFP29279 RNA5SP257-201ENST00000363023 116 ntBASIC0.82□□□□□ -2.28
CTGFP29279 SNORD1B-201ENST00000363091 84 ntBASIC0.82□□□□□ -2.28
CTGFP29279 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
CTGFP29279 RNU4-33P-201ENST00000364316 85 ntBASIC0.82□□□□□ -2.28
CTGFP29279 SNORA8.2-201ENST00000384372 139 ntBASIC0.82□□□□□ -2.28
CTGFP29279 MIR608-201ENST00000384820 100 ntBASIC0.82□□□□□ -2.28
CTGFP29279 MIR579-201ENST00000385221 98 ntBASIC0.82□□□□□ -2.28
CTGFP29279 RNU6-930P-201ENST00000390938 100 ntBASIC0.82□□□□□ -2.28
CTGFP29279 RNU6-337P-201ENST00000391243 106 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 251.5 ms