Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 RNA5SP136-201ENST00000410906 107 ntBASIC-1.44□□□□□ -2.64
COL6A3P12111 AC090574.1-201ENST00000623186 233 ntBASIC-1.44□□□□□ -2.64
COL6A3P12111 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 RNU6-737P-201ENST00000365370 107 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 SNORA26.8-201ENST00000391306 124 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.45□□□□□ -2.64
COL6A3P12111 AC080013.6-201ENST00000606185 215 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 AC015540.1-201ENST00000615828 501 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 SNORA41B-201ENST00000384785 128 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 AL445567.1-201ENST00000439121 144 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 RNU6-530P-201ENST00000391180 107 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 RNU6-232P-201ENST00000517144 64 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 AC025253.1-201ENST00000613623 543 ntBASIC-1.45□□□□□ -2.64
COL6A3P12111 SNORD116-10-201ENST00000363791 102 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 RNY3P8-201ENST00000411366 126 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 RNU7-125P-201ENST00000458760 62 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 MIR548V-201ENST00000584165 80 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 MIR7978-201ENST00000636158 59 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 SNORD113-6-201ENST00000363345 75 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 RNU6-828P-201ENST00000364876 107 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 MIR577-201ENST00000385196 96 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 RNU6-908P-201ENST00000410160 94 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 MTND1P29-201ENST00000448112 647 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 RNU6-982P-201ENST00000516216 102 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 MIR4439-201ENST00000583746 80 ntBASIC-1.46□□□□□ -2.64
COL6A3P12111 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.47□□□□□ -2.64
COL6A3P12111 RNU6-578P-201ENST00000390980 103 ntBASIC-1.47□□□□□ -2.64
COL6A3P12111 RNU6-916P-201ENST00000516088 109 ntBASIC-1.47□□□□□ -2.64
COL6A3P12111 AC090971.5-201ENST00000621102 293 ntBASIC-1.47□□□□□ -2.64
COL6A3P12111 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.47□□□□□ -2.64
COL6A3P12111 RNU6-644P-201ENST00000391155 98 ntBASIC-1.47□□□□□ -2.64
COL6A3P12111 AL450471.1-201ENST00000447509 127 ntBASIC-1.47□□□□□ -2.64
COL6A3P12111 MTND1P19-201ENST00000511780 315 ntBASIC-1.47□□□□□ -2.64
COL6A3P12111 MIR4272-201ENST00000635924 64 ntBASIC-1.47□□□□□ -2.64
COL6A3P12111 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.47□□□□□ -2.65
COL6A3P12111 SNORD81.2-201ENST00000365153 76 ntBASIC-1.47□□□□□ -2.65
COL6A3P12111 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.47□□□□□ -2.65
COL6A3P12111 SNORD116-6-201ENST00000384711 96 ntBASIC-1.47□□□□□ -2.65
COL6A3P12111 RNU6-381P-201ENST00000391259 108 ntBASIC-1.47□□□□□ -2.65
COL6A3P12111 SNORA17.4-201ENST00000391287 132 ntBASIC-1.47□□□□□ -2.65
COL6A3P12111 MIR1236-201ENST00000408340 102 ntBASIC-1.47□□□□□ -2.65
COL6A3P12111 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.47□□□□□ -2.65
COL6A3P12111 RPS29P30-201ENST00000600975 111 ntBASIC-1.47□□□□□ -2.65
COL6A3P12111 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.48□□□□□ -2.65
COL6A3P12111 SNORD58A-201ENST00000383875 65 ntBASIC-1.48□□□□□ -2.65
COL6A3P12111 RNU6-493P-201ENST00000391321 108 ntBASIC-1.48□□□□□ -2.65
COL6A3P12111 MIR548P-201ENST00000408336 84 ntBASIC-1.48□□□□□ -2.65
COL6A3P12111 MIR3149-201ENST00000584629 83 ntBASIC-1.48□□□□□ -2.65
COL6A3P12111 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.48□□□□□ -2.65
COL6A3P12111 RNU6-587P-201ENST00000391282 106 ntBASIC-1.48□□□□□ -2.65
COL6A3P12111 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.49□□□□□ -2.65
COL6A3P12111 RN7SKP298-201ENST00000515950 94 ntBASIC-1.49□□□□□ -2.65
COL6A3P12111 RNU6-822P-201ENST00000362707 106 ntBASIC-1.49□□□□□ -2.65
COL6A3P12111 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.49□□□□□ -2.65
COL6A3P12111 SNORD116-2-201ENST00000384274 95 ntBASIC-1.49□□□□□ -2.65
COL6A3P12111 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.49□□□□□ -2.65
COL6A3P12111 RNU6-972P-201ENST00000391208 107 ntBASIC-1.49□□□□□ -2.65
COL6A3P12111 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.49□□□□□ -2.65
COL6A3P12111 SNORD58B-201ENST00000607313 66 ntBASIC-1.49□□□□□ -2.65
COL6A3P12111 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.49□□□□□ -2.65
COL6A3P12111 RNU6-554P-201ENST00000410466 106 ntBASIC-1.49□□□□□ -2.65
COL6A3P12111 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.49□□□□□ -2.65
COL6A3P12111 MIR3613-201ENST00000579844 87 ntBASIC-1.49□□□□□ -2.65
COL6A3P12111 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 MIR513B-201ENST00000385136 84 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 MIR125B1-201ENST00000385236 88 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 MIR6844-201ENST00000637122 62 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 RNU6-768P-201ENST00000384683 107 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 MIR3121-201ENST00000579680 77 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.5□□□□□ -2.65
COL6A3P12111 RNU6-780P-201ENST00000391030 104 ntBASIC-1.51□□□□□ -2.65
COL6A3P12111 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.51□□□□□ -2.65
COL6A3P12111 RNU6-668P-201ENST00000364180 107 ntBASIC-1.51□□□□□ -2.65
COL6A3P12111 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.51□□□□□ -2.65
COL6A3P12111 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.51□□□□□ -2.65
COL6A3P12111 MIR1302-6-201ENST00000408466 90 ntBASIC-1.51□□□□□ -2.65
COL6A3P12111 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.51□□□□□ -2.65
COL6A3P12111 MIR4426-201ENST00000640330 63 ntBASIC-1.51□□□□□ -2.65
COL6A3P12111 SNORD77.2-201ENST00000391045 68 ntBASIC-1.51□□□□□ -2.65
COL6A3P12111 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.51□□□□□ -2.65
COL6A3P12111 RNU6-781P-201ENST00000516377 101 ntBASIC-1.51□□□□□ -2.65
COL6A3P12111 RNU6-451P-201ENST00000362921 107 ntBASIC-1.52□□□□□ -2.65
COL6A3P12111 RNU6-590P-201ENST00000365039 107 ntBASIC-1.52□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 303 ms