Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.36□□□□□ -2.19
CSB-PGBD3P0DP91 SNORD60.1-201ENST00000362451 73 ntBASIC1.35□□□□□ -2.19
CSB-PGBD3P0DP91 SNORA33.1-201ENST00000364957 130 ntBASIC1.35□□□□□ -2.19
CSB-PGBD3P0DP91 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.35□□□□□ -2.19
CSB-PGBD3P0DP91 MIR4473-201ENST00000583731 91 ntBASIC1.35□□□□□ -2.19
CSB-PGBD3P0DP91 U2.7-201ENST00000619197 100 ntBASIC1.35□□□□□ -2.19
CSB-PGBD3P0DP91 SCARNA17.3-201ENST00000516381 125 ntBASIC1.34□□□□□ -2.19
CSB-PGBD3P0DP91 MIR3973-201ENST00000579824 107 ntBASIC1.34□□□□□ -2.19
CSB-PGBD3P0DP91 RNU4-38P-201ENST00000364472 129 ntBASIC1.33□□□□□ -2.2
CSB-PGBD3P0DP91 RNU6-302P-201ENST00000365249 107 ntBASIC1.33□□□□□ -2.2
CSB-PGBD3P0DP91 Y_RNA.407-201ENST00000383986 113 ntBASIC1.33□□□□□ -2.2
CSB-PGBD3P0DP91 RNU7-174P-201ENST00000516248 59 ntBASIC1.33□□□□□ -2.2
CSB-PGBD3P0DP91 RNA5SP268-201ENST00000516828 124 ntBASIC1.33□□□□□ -2.2
CSB-PGBD3P0DP91 MIR7107-201ENST00000611489 80 ntBASIC1.33□□□□□ -2.2
CSB-PGBD3P0DP91 SNORD113-4-201ENST00000364802 75 ntBASIC1.32□□□□□ -2.2
CSB-PGBD3P0DP91 MIR548E-201ENST00000408287 88 ntBASIC1.32□□□□□ -2.2
CSB-PGBD3P0DP91 AC006210.1-201ENST00000424882 111 ntBASIC1.32□□□□□ -2.2
CSB-PGBD3P0DP91 RNA5SP94-201ENST00000516917 108 ntBASIC1.32□□□□□ -2.2
CSB-PGBD3P0DP91 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.32□□□□□ -2.2
CSB-PGBD3P0DP91 CYP3A137P-201ENST00000562436 69 ntBASIC1.32□□□□□ -2.2
CSB-PGBD3P0DP91 MIR3938-201ENST00000582157 103 ntBASIC1.32□□□□□ -2.2
CSB-PGBD3P0DP91 SNORA63.6-201ENST00000364921 119 ntBASIC1.31□□□□□ -2.2
CSB-PGBD3P0DP91 SNORD110-201ENST00000408189 75 ntBASIC1.31□□□□□ -2.2
CSB-PGBD3P0DP91 SNORA70.25-201ENST00000612741 95 ntBASIC1.31□□□□□ -2.2
CSB-PGBD3P0DP91 U4.4-201ENST00000620626 117 ntBASIC1.31□□□□□ -2.2
CSB-PGBD3P0DP91 Y_RNA.125-201ENST00000363371 111 ntBASIC1.3□□□□□ -2.2
CSB-PGBD3P0DP91 RNU4-45P-201ENST00000365469 141 ntBASIC1.3□□□□□ -2.2
CSB-PGBD3P0DP91 RNA5SP222-201ENST00000411039 105 ntBASIC1.3□□□□□ -2.2
CSB-PGBD3P0DP91 MIR4752-201ENST00000579672 72 ntBASIC1.3□□□□□ -2.2
CSB-PGBD3P0DP91 MIR7978-201ENST00000636158 59 ntBASIC1.3□□□□□ -2.2
CSB-PGBD3P0DP91 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CSB-PGBD3P0DP91 SNORA15B-2-201ENST00000384058 135 ntBASIC1.29□□□□□ -2.2
CSB-PGBD3P0DP91 SNORA15B-1-201ENST00000384334 135 ntBASIC1.29□□□□□ -2.2
CSB-PGBD3P0DP91 MIR608-201ENST00000384820 100 ntBASIC1.29□□□□□ -2.2
CSB-PGBD3P0DP91 MIR532-201ENST00000385025 91 ntBASIC1.29□□□□□ -2.2
CSB-PGBD3P0DP91 MIR6857-201ENST00000613267 93 ntBASIC1.29□□□□□ -2.2
CSB-PGBD3P0DP91 RNU6-698P-201ENST00000363523 107 ntBASIC1.28□□□□□ -2.2
CSB-PGBD3P0DP91 RNU6-34P-201ENST00000364874 107 ntBASIC1.28□□□□□ -2.2
CSB-PGBD3P0DP91 MIR517B-201ENST00000385102 67 ntBASIC1.28□□□□□ -2.2
CSB-PGBD3P0DP91 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
CSB-PGBD3P0DP91 ACA64.5-201ENST00000516207 127 ntBASIC1.28□□□□□ -2.2
CSB-PGBD3P0DP91 MIR4698-201ENST00000577795 80 ntBASIC1.28□□□□□ -2.2
CSB-PGBD3P0DP91 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CSB-PGBD3P0DP91 RNY1P8-201ENST00000383970 114 ntBASIC1.26□□□□□ -2.21
CSB-PGBD3P0DP91 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CSB-PGBD3P0DP91 MIR216A-201ENST00000385063 110 ntBASIC1.25□□□□□ -2.21
CSB-PGBD3P0DP91 RN7SL793P-201ENST00000583259 296 ntBASIC1.25□□□□□ -2.21
CSB-PGBD3P0DP91 RNU1-29P-201ENST00000606574 126 ntBASIC1.25□□□□□ -2.21
CSB-PGBD3P0DP91 uc_338.10-201ENST00000621872 182 ntBASIC1.25□□□□□ -2.21
CSB-PGBD3P0DP91 SNORD113-2-201ENST00000391082 72 ntBASIC1.24□□□□□ -2.21
CSB-PGBD3P0DP91 HMGN2P22-201ENST00000427588 175 ntBASIC1.24□□□□□ -2.21
CSB-PGBD3P0DP91 AC090617.8-201ENST00000623339 167 ntBASIC1.24□□□□□ -2.21
CSB-PGBD3P0DP91 SNORA36.2-201ENST00000384004 127 ntBASIC1.22□□□□□ -2.21
CSB-PGBD3P0DP91 RNU6-1246P-201ENST00000391064 107 ntBASIC1.22□□□□□ -2.21
CSB-PGBD3P0DP91 Y_RNA.325-201ENST00000365171 122 ntBASIC1.21□□□□□ -2.22
CSB-PGBD3P0DP91 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CSB-PGBD3P0DP91 SNORA41B-201ENST00000384785 128 ntBASIC1.2□□□□□ -2.22
CSB-PGBD3P0DP91 MIR516B1-201ENST00000385211 90 ntBASIC1.2□□□□□ -2.22
CSB-PGBD3P0DP91 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.2□□□□□ -2.22
CSB-PGBD3P0DP91 Y_RNA.722-201ENST00000517279 114 ntBASIC1.2□□□□□ -2.22
CSB-PGBD3P0DP91 CYP3A54P-201ENST00000566950 75 ntBASIC1.2□□□□□ -2.22
CSB-PGBD3P0DP91 RNA5SP517-201ENST00000364724 117 ntBASIC1.19□□□□□ -2.22
CSB-PGBD3P0DP91 RNU6-936P-201ENST00000384005 107 ntBASIC1.19□□□□□ -2.22
CSB-PGBD3P0DP91 AC069271.1-201ENST00000445577 156 ntBASIC1.19□□□□□ -2.22
CSB-PGBD3P0DP91 MIR4714-201ENST00000580728 77 ntBASIC1.19□□□□□ -2.22
CSB-PGBD3P0DP91 Y_RNA.246-201ENST00000364495 108 ntBASIC1.18□□□□□ -2.22
CSB-PGBD3P0DP91 SNORA9.1-201ENST00000362412 131 ntBASIC1.17□□□□□ -2.22
CSB-PGBD3P0DP91 RNU6-1312P-201ENST00000362425 108 ntBASIC1.17□□□□□ -2.22
CSB-PGBD3P0DP91 PSMC1P5-201ENST00000512850 177 ntBASIC1.17□□□□□ -2.22
CSB-PGBD3P0DP91 U6.96-201ENST00000636425 70 ntBASIC1.17□□□□□ -2.22
CSB-PGBD3P0DP91 RNU6-110P-201ENST00000384508 104 ntBASIC1.15□□□□□ -2.23
CSB-PGBD3P0DP91 MIR140-201ENST00000385282 100 ntBASIC1.15□□□□□ -2.23
CSB-PGBD3P0DP91 SNORA25.18-201ENST00000607153 114 ntBASIC1.15□□□□□ -2.23
CSB-PGBD3P0DP91 RNU6-1184P-201ENST00000384588 108 ntBASIC1.14□□□□□ -2.23
CSB-PGBD3P0DP91 AC243829.6-201ENST00000612652 106 ntBASIC1.14□□□□□ -2.23
CSB-PGBD3P0DP91 RPL39P28-201ENST00000465655 155 ntBASIC1.13□□□□□ -2.23
CSB-PGBD3P0DP91 RNU6-518P-201ENST00000516056 96 ntBASIC1.12□□□□□ -2.23
CSB-PGBD3P0DP91 RNU6-1232P-201ENST00000516299 86 ntBASIC1.12□□□□□ -2.23
CSB-PGBD3P0DP91 AC244090.1-201ENST00000441884 93 ntBASIC1.11□□□□□ -2.23
CSB-PGBD3P0DP91 MIR5706-201ENST00000579841 80 ntBASIC1.11□□□□□ -2.23
CSB-PGBD3P0DP91 MIR548AD-201ENST00000584780 82 ntBASIC1.11□□□□□ -2.23
CSB-PGBD3P0DP91 MIR20A-201ENST00000362279 71 ntBASIC1.1□□□□□ -2.23
CSB-PGBD3P0DP91 RNU6-808P-201ENST00000391233 108 ntBASIC1.1□□□□□ -2.23
CSB-PGBD3P0DP91 MIR1255B2-201ENST00000408618 67 ntBASIC1.1□□□□□ -2.23
CSB-PGBD3P0DP91 AC243829.3-201ENST00000622177 108 ntBASIC1.1□□□□□ -2.23
CSB-PGBD3P0DP91 MIR519A2-201ENST00000384990 87 ntBASIC1.09□□□□□ -2.23
CSB-PGBD3P0DP91 SNORA49-201ENST00000386157 136 ntBASIC1.09□□□□□ -2.23
CSB-PGBD3P0DP91 RNU6-337P-201ENST00000391243 106 ntBASIC1.09□□□□□ -2.23
CSB-PGBD3P0DP91 AL021921.1-201ENST00000442774 93 ntBASIC1.09□□□□□ -2.23
CSB-PGBD3P0DP91 MIR548AG1-201ENST00000579932 66 ntBASIC1.09□□□□□ -2.23
CSB-PGBD3P0DP91 SNORD118-201ENST00000363593 134 ntBASIC1.08□□□□□ -2.24
CSB-PGBD3P0DP91 RNU6-520P-201ENST00000384717 104 ntBASIC1.07□□□□□ -2.24
CSB-PGBD3P0DP91 RNU4-54P-201ENST00000516428 129 ntBASIC1.07□□□□□ -2.24
CSB-PGBD3P0DP91 RNU7-188P-201ENST00000517063 64 ntBASIC1.07□□□□□ -2.24
CSB-PGBD3P0DP91 MIR6513-201ENST00000621188 64 ntBASIC1.07□□□□□ -2.24
CSB-PGBD3P0DP91 Y_RNA.423-201ENST00000384057 113 ntBASIC1.06□□□□□ -2.24
CSB-PGBD3P0DP91 MIR508-201ENST00000384857 115 ntBASIC1.06□□□□□ -2.24
CSB-PGBD3P0DP91 MIR193B-201ENST00000384907 83 ntBASIC1.06□□□□□ -2.24
CSB-PGBD3P0DP91 MIR4653-201ENST00000585107 83 ntBASIC1.06□□□□□ -2.24
CSB-PGBD3P0DP91 MIR6835-201ENST00000621552 64 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 347.9 ms