Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 AC006254.2-201ENST00000603259 279 ntBASIC-0.09□□□□□ -2.42
HOXD4P09016 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.09□□□□□ -2.42
HOXD4P09016 MIR4773-1-201ENST00000637203 78 ntBASIC-0.09□□□□□ -2.42
HOXD4P09016 RNA5SP98-201ENST00000363158 137 ntBASIC-0.1□□□□□ -2.43
HOXD4P09016 SNORA49-201ENST00000386157 136 ntBASIC-0.1□□□□□ -2.43
HOXD4P09016 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.1□□□□□ -2.43
HOXD4P09016 RNU6-208P-201ENST00000362431 107 ntBASIC-0.11□□□□□ -2.43
HOXD4P09016 RNU6-990P-201ENST00000364385 104 ntBASIC-0.11□□□□□ -2.43
HOXD4P09016 AL450471.1-201ENST00000447509 127 ntBASIC-0.11□□□□□ -2.43
HOXD4P09016 AC140658.3-201ENST00000567603 271 ntBASIC-0.11□□□□□ -2.43
HOXD4P09016 U6.81-201ENST00000612550 106 ntBASIC-0.11□□□□□ -2.43
HOXD4P09016 MIR6507-201ENST00000613630 70 ntBASIC-0.11□□□□□ -2.43
HOXD4P09016 RNU6-46P-201ENST00000383860 107 ntBASIC-0.12□□□□□ -2.43
HOXD4P09016 SNORD77.2-201ENST00000391045 68 ntBASIC-0.12□□□□□ -2.43
HOXD4P09016 AC244250.2-201ENST00000418731 148 ntBASIC-0.12□□□□□ -2.43
HOXD4P09016 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.12□□□□□ -2.43
HOXD4P09016 SNORD114-31-201ENST00000363219 75 ntBASIC-0.13□□□□□ -2.43
HOXD4P09016 SNORA32.1-201ENST00000364514 115 ntBASIC-0.13□□□□□ -2.43
HOXD4P09016 AC104692.1-201ENST00000472406 90 ntBASIC-0.13□□□□□ -2.43
HOXD4P09016 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.13□□□□□ -2.43
HOXD4P09016 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.13□□□□□ -2.43
HOXD4P09016 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.14□□□□□ -2.43
HOXD4P09016 RNU6-624P-201ENST00000363411 107 ntBASIC-0.14□□□□□ -2.43
HOXD4P09016 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.14□□□□□ -2.43
HOXD4P09016 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.14□□□□□ -2.43
HOXD4P09016 RNU6-592P-201ENST00000411333 103 ntBASIC-0.14□□□□□ -2.43
HOXD4P09016 RNU6-274P-201ENST00000459566 107 ntBASIC-0.14□□□□□ -2.43
HOXD4P09016 SNORA40.17-201ENST00000517256 115 ntBASIC-0.14□□□□□ -2.43
HOXD4P09016 MIR5582-201ENST00000579697 68 ntBASIC-0.14□□□□□ -2.43
HOXD4P09016 AC145423.2-201ENST00000610631 239 ntBASIC-0.14□□□□□ -2.43
HOXD4P09016 SNORA63.6-201ENST00000364921 119 ntBASIC-0.15□□□□□ -2.43
HOXD4P09016 SNORD49B-201ENST00000365172 72 ntBASIC-0.15□□□□□ -2.43
HOXD4P09016 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.15□□□□□ -2.43
HOXD4P09016 AP000676.1-201ENST00000533307 52 ntBASIC-0.15□□□□□ -2.43
HOXD4P09016 MIR6509-201ENST00000614603 85 ntBASIC-0.15□□□□□ -2.43
HOXD4P09016 MIR1295B-201ENST00000636144 60 ntBASIC-0.15□□□□□ -2.43
HOXD4P09016 AC006160.2-201ENST00000637708 154 ntBASIC-0.15□□□□□ -2.43
HOXD4P09016 SNORD115-25-201ENST00000362619 82 ntBASIC-0.16□□□□□ -2.44
HOXD4P09016 RNU6-340P-201ENST00000364005 107 ntBASIC-0.16□□□□□ -2.44
HOXD4P09016 RNY1P1-201ENST00000364372 112 ntBASIC-0.16□□□□□ -2.44
HOXD4P09016 MIR203A-201ENST00000384836 110 ntBASIC-0.16□□□□□ -2.44
HOXD4P09016 Z95118.1-201ENST00000421372 247 ntBASIC-0.16□□□□□ -2.44
HOXD4P09016 AL691482.2-201ENST00000457453 84 ntBASIC-0.16□□□□□ -2.44
HOXD4P09016 SNORD2-201ENST00000459163 69 ntBASIC-0.16□□□□□ -2.44
HOXD4P09016 IGLL4P-201ENST00000614590 133 ntBASIC-0.16□□□□□ -2.44
HOXD4P09016 MIR655-201ENST00000362159 97 ntBASIC-0.17□□□□□ -2.44
HOXD4P09016 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.17□□□□□ -2.44
HOXD4P09016 RNU6-294P-201ENST00000364999 102 ntBASIC-0.17□□□□□ -2.44
HOXD4P09016 SNORD114-12-201ENST00000365400 75 ntBASIC-0.17□□□□□ -2.44
HOXD4P09016 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.17□□□□□ -2.44
HOXD4P09016 AC021146.9-201ENST00000512503 156 ntBASIC-0.17□□□□□ -2.44
HOXD4P09016 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.18□□□□□ -2.44
HOXD4P09016 SNORA18.1-201ENST00000363418 128 ntBASIC-0.18□□□□□ -2.44
HOXD4P09016 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.18□□□□□ -2.44
HOXD4P09016 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.18□□□□□ -2.44
HOXD4P09016 RNU6-260P-201ENST00000384092 107 ntBASIC-0.18□□□□□ -2.44
HOXD4P09016 RNU6-455P-201ENST00000384681 107 ntBASIC-0.18□□□□□ -2.44
HOXD4P09016 MIR214-201ENST00000385214 110 ntBASIC-0.18□□□□□ -2.44
HOXD4P09016 snoU13.13-201ENST00000458842 104 ntBASIC-0.18□□□□□ -2.44
HOXD4P09016 RNU6-557P-201ENST00000516842 110 ntBASIC-0.18□□□□□ -2.44
HOXD4P09016 YWHAEP3-201ENST00000582767 121 ntBASIC-0.18□□□□□ -2.44
HOXD4P09016 MIR3657-201ENST00000584818 117 ntBASIC-0.18□□□□□ -2.44
HOXD4P09016 SNORD4A-201ENST00000459174 72 ntBASIC-0.19□□□□□ -2.44
HOXD4P09016 RNA5SP147-201ENST00000516493 109 ntBASIC-0.19□□□□□ -2.44
HOXD4P09016 RNA5SP170-201ENST00000517150 101 ntBASIC-0.19□□□□□ -2.44
HOXD4P09016 MIR5588-201ENST00000581890 63 ntBASIC-0.19□□□□□ -2.44
HOXD4P09016 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
HOXD4P09016 MIR494-201ENST00000349529 81 ntBASIC-0.2□□□□□ -2.44
HOXD4P09016 RNU6-478P-201ENST00000363904 110 ntBASIC-0.2□□□□□ -2.44
HOXD4P09016 RNU6-681P-201ENST00000364012 104 ntBASIC-0.2□□□□□ -2.44
HOXD4P09016 RNU6-979P-201ENST00000383896 107 ntBASIC-0.2□□□□□ -2.44
HOXD4P09016 MIR9-2-201ENST00000384838 87 ntBASIC-0.2□□□□□ -2.44
HOXD4P09016 RNA5SP25-201ENST00000410815 110 ntBASIC-0.2□□□□□ -2.44
HOXD4P09016 RNU6-752P-201ENST00000516376 102 ntBASIC-0.2□□□□□ -2.44
HOXD4P09016 AP001180.6-201ENST00000584918 159 ntBASIC-0.2□□□□□ -2.44
HOXD4P09016 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.2□□□□□ -2.44
HOXD4P09016 RNU6-502P-201ENST00000362419 108 ntBASIC-0.21□□□□□ -2.44
HOXD4P09016 SNORA2.1-201ENST00000363089 137 ntBASIC-0.21□□□□□ -2.44
HOXD4P09016 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.21□□□□□ -2.44
HOXD4P09016 RNU6-129P-201ENST00000391022 107 ntBASIC-0.21□□□□□ -2.44
HOXD4P09016 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.21□□□□□ -2.44
HOXD4P09016 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.21□□□□□ -2.44
HOXD4P09016 AC022137.1-201ENST00000483735 151 ntBASIC-0.21□□□□□ -2.44
HOXD4P09016 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.21□□□□□ -2.44
HOXD4P09016 MIR4645-201ENST00000583158 77 ntBASIC-0.21□□□□□ -2.44
HOXD4P09016 MIR4493-201ENST00000584016 73 ntBASIC-0.21□□□□□ -2.44
HOXD4P09016 RNU6-686P-201ENST00000364839 107 ntBASIC-0.22□□□□□ -2.44
HOXD4P09016 MIR450A2-201ENST00000385022 100 ntBASIC-0.22□□□□□ -2.44
HOXD4P09016 RNU6-758P-201ENST00000516292 89 ntBASIC-0.22□□□□□ -2.44
HOXD4P09016 MIR3666-201ENST00000607845 111 ntBASIC-0.22□□□□□ -2.44
HOXD4P09016 MIR6773-201ENST00000612812 74 ntBASIC-0.22□□□□□ -2.44
HOXD4P09016 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.23□□□□□ -2.45
HOXD4P09016 RNU6-900P-201ENST00000384498 102 ntBASIC-0.23□□□□□ -2.45
HOXD4P09016 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.24□□□□□ -2.45
HOXD4P09016 RNU6-337P-201ENST00000391243 106 ntBASIC-0.24□□□□□ -2.45
HOXD4P09016 RNU7-55P-201ENST00000459426 62 ntBASIC-0.24□□□□□ -2.45
HOXD4P09016 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.25□□□□□ -2.45
HOXD4P09016 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.25□□□□□ -2.45
HOXD4P09016 RNU7-171P-201ENST00000459581 62 ntBASIC-0.25□□□□□ -2.45
HOXD4P09016 RNU6-303P-201ENST00000517091 106 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 289.3 ms