Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.47□□□□□ -2.81
APOBP04114 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.48□□□□□ -2.81
APOBP04114 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.48□□□□□ -2.81
APOBP04114 RNU6-297P-201ENST00000384636 107 ntBASIC-2.48□□□□□ -2.81
APOBP04114 RNY4P20-201ENST00000516678 93 ntBASIC-2.48□□□□□ -2.81
APOBP04114 RNU6-89P-201ENST00000606519 100 ntBASIC-2.48□□□□□ -2.81
APOBP04114 RNU6-1013P-201ENST00000384180 107 ntBASIC-2.49□□□□□ -2.81
APOBP04114 AL451105.1-201ENST00000450005 189 ntBASIC-2.49□□□□□ -2.81
APOBP04114 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-2.49□□□□□ -2.81
APOBP04114 MIR548Z-201ENST00000584743 97 ntBASIC-2.49□□□□□ -2.81
APOBP04114 SNORD113-8-201ENST00000363497 74 ntBASIC-2.49□□□□□ -2.81
APOBP04114 RNA5SP173-201ENST00000364857 136 ntBASIC-2.49□□□□□ -2.81
APOBP04114 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.49□□□□□ -2.81
APOBP04114 RNU6-248P-201ENST00000410720 107 ntBASIC-2.49□□□□□ -2.81
APOBP04114 AC124864.2-201ENST00000624736 186 ntBASIC-2.49□□□□□ -2.81
APOBP04114 SNORD58A-201ENST00000383875 65 ntBASIC-2.49□□□□□ -2.81
APOBP04114 RNU6-493P-201ENST00000391321 108 ntBASIC-2.49□□□□□ -2.81
APOBP04114 MIR4744-201ENST00000581563 82 ntBASIC-2.49□□□□□ -2.81
APOBP04114 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.49□□□□□ -2.81
APOBP04114 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.49□□□□□ -2.81
APOBP04114 snoU18.1-201ENST00000629629 71 ntBASIC-2.49□□□□□ -2.81
APOBP04114 Y_RNA.813-201ENST00000364639 102 ntBASIC-2.5□□□□□ -2.81
APOBP04114 RNU6-373P-201ENST00000411247 98 ntBASIC-2.5□□□□□ -2.81
APOBP04114 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.5□□□□□ -2.81
APOBP04114 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-2.5□□□□□ -2.81
APOBP04114 DLEU2_1.2-201ENST00000614667 120 ntBASIC-2.5□□□□□ -2.81
APOBP04114 RNU6-103P-201ENST00000363686 107 ntBASIC-2.51□□□□□ -2.81
APOBP04114 RNU6-1090P-201ENST00000364065 94 ntBASIC-2.51□□□□□ -2.81
APOBP04114 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.51□□□□□ -2.81
APOBP04114 SNORD18B-201ENST00000365659 72 ntBASIC-2.51□□□□□ -2.81
APOBP04114 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.51□□□□□ -2.81
APOBP04114 RNU6-742P-201ENST00000365289 107 ntBASIC-2.51□□□□□ -2.81
APOBP04114 RNU6-276P-201ENST00000516114 96 ntBASIC-2.52□□□□□ -2.81
APOBP04114 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.52□□□□□ -2.81
APOBP04114 Z69908.1-201ENST00000622603 247 ntBASIC-2.52□□□□□ -2.81
APOBP04114 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.52□□□□□ -2.81
APOBP04114 RNU6-636P-201ENST00000384598 107 ntBASIC-2.52□□□□□ -2.81
APOBP04114 MIR1255B1-201ENST00000636325 63 ntBASIC-2.52□□□□□ -2.81
APOBP04114 MIR1236-201ENST00000408340 102 ntBASIC-2.53□□□□□ -2.81
APOBP04114 MIR4439-201ENST00000583746 80 ntBASIC-2.53□□□□□ -2.81
APOBP04114 SNORA25.1-201ENST00000362326 128 ntBASIC-2.53□□□□□ -2.81
APOBP04114 MT-TI-201ENST00000387365 69 ntBASIC-2.54□□□□□ -2.82
APOBP04114 RNU6-836P-201ENST00000362920 107 ntBASIC-2.54□□□□□ -2.82
APOBP04114 RNU6-776P-201ENST00000364403 104 ntBASIC-2.54□□□□□ -2.82
APOBP04114 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.54□□□□□ -2.82
APOBP04114 Y_RNA.414-201ENST00000384011 101 ntBASIC-2.54□□□□□ -2.82
APOBP04114 RNU6-510P-201ENST00000391239 108 ntBASIC-2.54□□□□□ -2.82
APOBP04114 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.54□□□□□ -2.82
APOBP04114 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.54□□□□□ -2.82
APOBP04114 AP000240.1-201ENST00000609910 452 ntBASIC-2.54□□□□□ -2.82
APOBP04114 AC093729.1-201ENST00000513074 128 ntBASIC-2.54□□□□□ -2.82
APOBP04114 RNU6-810P-201ENST00000364001 107 ntBASIC-2.55□□□□□ -2.82
APOBP04114 RNU6-332P-201ENST00000391193 108 ntBASIC-2.55□□□□□ -2.82
APOBP04114 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.55□□□□□ -2.82
APOBP04114 RNU6-982P-201ENST00000516216 102 ntBASIC-2.55□□□□□ -2.82
APOBP04114 MIR8053-201ENST00000613344 75 ntBASIC-2.55□□□□□ -2.82
APOBP04114 MIR3658-201ENST00000636291 56 ntBASIC-2.55□□□□□ -2.82
APOBP04114 SNORD45C-201ENST00000383893 79 ntBASIC-2.55□□□□□ -2.82
APOBP04114 RNU6-561P-201ENST00000516222 102 ntBASIC-2.55□□□□□ -2.82
APOBP04114 RNU6-972P-201ENST00000391208 107 ntBASIC-2.56□□□□□ -2.82
APOBP04114 RNU6-1088P-201ENST00000516850 104 ntBASIC-2.56□□□□□ -2.82
APOBP04114 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.56□□□□□ -2.82
APOBP04114 RNU6-648P-201ENST00000410190 107 ntBASIC-2.56□□□□□ -2.82
APOBP04114 MTND5P5-201ENST00000503764 376 ntBASIC-2.56□□□□□ -2.82
APOBP04114 MIR548AB-201ENST00000584917 84 ntBASIC-2.56□□□□□ -2.82
APOBP04114 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2.56□□□□□ -2.82
APOBP04114 NBR2-204ENST00000587322 63 ntBASIC-2.56□□□□□ -2.82
APOBP04114 AC025253.1-201ENST00000613623 543 ntBASIC-2.56□□□□□ -2.82
APOBP04114 MIR545-201ENST00000385085 106 ntBASIC-2.57□□□□□ -2.82
APOBP04114 AL050303.3-201ENST00000613704 284 ntBASIC-2.57□□□□□ -2.82
APOBP04114 DLEU2_2.2-201ENST00000615474 90 ntBASIC-2.58□□□□□ -2.82
APOBP04114 MIR376A1-201ENST00000616574 68 ntBASIC-2.58□□□□□ -2.82
APOBP04114 Y_RNA.202-201ENST00000364083 110 ntBASIC-2.58□□□□□ -2.82
APOBP04114 SNORD116-1-201ENST00000384335 95 ntBASIC-2.58□□□□□ -2.82
APOBP04114 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.58□□□□□ -2.82
APOBP04114 SNORD45B-201ENST00000364617 72 ntBASIC-2.59□□□□□ -2.82
APOBP04114 RNU6-326P-201ENST00000365480 107 ntBASIC-2.59□□□□□ -2.82
APOBP04114 RNU7-66P-201ENST00000459469 62 ntBASIC-2.59□□□□□ -2.82
APOBP04114 MIR4796-201ENST00000580742 81 ntBASIC-2.59□□□□□ -2.82
APOBP04114 MIR3149-201ENST00000584629 83 ntBASIC-2.59□□□□□ -2.82
APOBP04114 AC068137.3-201ENST00000639191 341 ntBASIC-2.59□□□□□ -2.82
APOBP04114 RNU6-813P-201ENST00000384691 107 ntBASIC-2.59□□□□□ -2.82
APOBP04114 Y_RNA.602-201ENST00000410535 92 ntBASIC-2.59□□□□□ -2.82
APOBP04114 Y_RNA.615-201ENST00000410769 117 ntBASIC-2.59□□□□□ -2.82
APOBP04114 MTND1P29-201ENST00000448112 647 ntBASIC-2.59□□□□□ -2.82
APOBP04114 SNORD2.1-201ENST00000458762 69 ntBASIC-2.59□□□□□ -2.82
APOBP04114 RNU6-566P-201ENST00000516790 107 ntBASIC-2.6□□□□□ -2.83
APOBP04114 Y_RNA.314-201ENST00000365114 102 ntBASIC-2.6□□□□□ -2.83
APOBP04114 MIR514A2-201ENST00000385131 88 ntBASIC-2.6□□□□□ -2.83
APOBP04114 MIR514A3-201ENST00000385132 88 ntBASIC-2.6□□□□□ -2.83
APOBP04114 RNU2-72P-201ENST00000411175 163 ntBASIC-2.6□□□□□ -2.83
APOBP04114 AC090574.1-201ENST00000623186 233 ntBASIC-2.6□□□□□ -2.83
APOBP04114 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.6□□□□□ -2.83
APOBP04114 Y_RNA.402-201ENST00000383972 102 ntBASIC-2.6□□□□□ -2.83
APOBP04114 MIR577-201ENST00000385196 96 ntBASIC-2.6□□□□□ -2.83
APOBP04114 RNU6-789P-201ENST00000517105 102 ntBASIC-2.6□□□□□ -2.83
APOBP04114 RNA5SP136-201ENST00000410906 107 ntBASIC-2.61□□□□□ -2.83
APOBP04114 MIR3675-201ENST00000583661 73 ntBASIC-2.61□□□□□ -2.83
APOBP04114 Y_RNA.201-201ENST00000364052 96 ntBASIC-2.61□□□□□ -2.83
APOBP04114 SNORD77.2-201ENST00000391045 68 ntBASIC-2.61□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 243.4 ms