Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 SNORD18B-201ENST00000365659 72 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 RNU6-519P-201ENST00000410590 108 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 RNU6-982P-201ENST00000516216 102 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 RNU6-795P-201ENST00000516323 103 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 SNORA40.15-201ENST00000516884 107 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 AC026407.1-201ENST00000518369 204 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 MIR3121-201ENST00000579680 77 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 U6.81-201ENST00000612550 106 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 U4.4-201ENST00000620626 117 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.97□□□□□ -2.56
COL1A1P02452 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.97□□□□□ -2.56
COL1A1P02452 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.98□□□□□ -2.57
COL1A1P02452 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.98□□□□□ -2.57
COL1A1P02452 RNU6-645P-201ENST00000364649 106 ntBASIC-0.98□□□□□ -2.57
COL1A1P02452 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.98□□□□□ -2.57
COL1A1P02452 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.98□□□□□ -2.57
COL1A1P02452 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.98□□□□□ -2.57
COL1A1P02452 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.98□□□□□ -2.57
COL1A1P02452 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.98□□□□□ -2.57
COL1A1P02452 RNU6-460P-201ENST00000391158 108 ntBASIC-0.98□□□□□ -2.57
COL1A1P02452 RNU6-876P-201ENST00000391295 104 ntBASIC-0.98□□□□□ -2.57
COL1A1P02452 MIR4282-201ENST00000583613 67 ntBASIC-0.98□□□□□ -2.57
COL1A1P02452 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 RNU6-330P-201ENST00000363015 107 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 RNU6-832P-201ENST00000363319 107 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 MIR630-201ENST00000384957 97 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 MIR1252-201ENST00000408861 65 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 RNU6-101P-201ENST00000410323 104 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 RNU7-174P-201ENST00000516248 59 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 RNU6-277P-201ENST00000516272 106 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 MIR548V-201ENST00000584165 80 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 AC090971.5-201ENST00000621102 293 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 RNU6-275P-201ENST00000364910 107 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 RNY3P1-201ENST00000365085 102 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 RNU6-587P-201ENST00000391282 106 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 MIR1302-6-201ENST00000408466 90 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 MIR4777-201ENST00000583710 86 ntBASIC-0.99□□□□□ -2.57
COL1A1P02452 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
COL1A1P02452 RNU6-247P-201ENST00000362636 107 ntBASIC-1□□□□□ -2.57
COL1A1P02452 RNU6-1283P-201ENST00000365314 105 ntBASIC-1□□□□□ -2.57
COL1A1P02452 RNU6-1081P-201ENST00000384537 107 ntBASIC-1□□□□□ -2.57
COL1A1P02452 MIR548A3-201ENST00000385297 97 ntBASIC-1□□□□□ -2.57
COL1A1P02452 RNU6-1111P-201ENST00000391118 107 ntBASIC-1□□□□□ -2.57
COL1A1P02452 RNU6-644P-201ENST00000391155 98 ntBASIC-1□□□□□ -2.57
COL1A1P02452 SNORA75.5-201ENST00000391291 81 ntBASIC-1□□□□□ -2.57
COL1A1P02452 Y_RNA.632-201ENST00000459189 102 ntBASIC-1□□□□□ -2.57
COL1A1P02452 SNORD63.2-201ENST00000516303 64 ntBASIC-1□□□□□ -2.57
COL1A1P02452 RNU6-807P-201ENST00000516805 107 ntBASIC-1□□□□□ -2.57
COL1A1P02452 AC012531.4-201ENST00000616509 177 ntBASIC-1□□□□□ -2.57
COL1A1P02452 AL035470.1-201ENST00000622571 220 ntBASIC-1□□□□□ -2.57
COL1A1P02452 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 RNU5F-1-201ENST00000362507 117 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 RNU6-340P-201ENST00000364005 107 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 RNU6-669P-201ENST00000365575 107 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 SNORA41B-201ENST00000384785 128 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 SNORD113-2-201ENST00000391082 72 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 RNU6-141P-201ENST00000410499 105 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 RNU7-151P-201ENST00000516930 53 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 AC022559.1-201ENST00000520905 205 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 MIR4796-201ENST00000580742 81 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.01□□□□□ -2.57
COL1A1P02452 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.01□□□□□ -2.57
COL1A1P02452 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.02□□□□□ -2.57
COL1A1P02452 RNU6-813P-201ENST00000384691 107 ntBASIC-1.02□□□□□ -2.57
COL1A1P02452 SNORD77.2-201ENST00000391045 68 ntBASIC-1.02□□□□□ -2.57
COL1A1P02452 SNORD37.2-201ENST00000391075 66 ntBASIC-1.02□□□□□ -2.57
COL1A1P02452 RNU2-38P-201ENST00000410856 79 ntBASIC-1.02□□□□□ -2.57
COL1A1P02452 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.02□□□□□ -2.57
COL1A1P02452 MIR4748-201ENST00000578076 82 ntBASIC-1.02□□□□□ -2.57
COL1A1P02452 U2.14-201ENST00000615943 113 ntBASIC-1.02□□□□□ -2.57
COL1A1P02452 FTX_4.1-201ENST00000616291 147 ntBASIC-1.02□□□□□ -2.57
COL1A1P02452 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.02□□□□□ -2.57
COL1A1P02452 MIR369-201ENST00000362155 70 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 RNU6-230P-201ENST00000362457 104 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 SNORD1B-201ENST00000363091 84 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 SNORD113-3-201ENST00000364830 72 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 222.2 ms